RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 DDX19BQ9UMR2 479 aa8.99□□□□□ -0.97
MARK3-212ENST00000558223 KIAA1024Q9UPX6 916 aa8.99□□□□□ -0.97
MARK3-212ENST00000558223 INPP5FQ9Y2H2 1132 aa8.99□□□□□ -0.97
MARK3-212ENST00000558223 ROBO2Q9HCK4 1378 aa8.99□□□□□ -0.97
MARK3-212ENST00000558223 KIF20BQ96Q89 1820 aa8.98□□□□□ -0.97
MARK3-212ENST00000558223 NRG2O14511 850 aaPredicted RBP8.98□□□□□ -0.97
MARK3-212ENST00000558223 STK10O94804 968 aaKnown RBP8.98□□□□□ -0.97
MARK3-212ENST00000558223 HSD3B2P26439 372 aa8.98□□□□□ -0.97
MARK3-212ENST00000558223 ATP6V1AP38606 617 aa8.98□□□□□ -0.97
MARK3-212ENST00000558223 GTF2IP78347 998 aa8.98□□□□□ -0.97
MARK3-212ENST00000558223 DAB2P98082 770 aa8.98□□□□□ -0.97
MARK3-212ENST00000558223 ATP2B2Q01814 1243 aa8.98□□□□□ -0.97
MARK3-212ENST00000558223 KMT5BQ4FZB7 885 aa8.98□□□□□ -0.97
MARK3-212ENST00000558223 ZNF746Q6NUN9 644 aaPredicted RBP8.98□□□□□ -0.97
MARK3-212ENST00000558223 TMED8Q6PL24 325 aaPredicted RBP8.98□□□□□ -0.97
MARK3-212ENST00000558223 ANKLE2Q86XL3 938 aa8.98□□□□□ -0.97
MARK3-212ENST00000558223 FTSJ3Q8IY81 847 aaKnown RBP8.98□□□□□ -0.97
MARK3-212ENST00000558223 EXOC8Q8IYI6 725 aa8.98□□□□□ -0.97
MARK3-212ENST00000558223 DZIP1LQ8IYY4 767 aaKnown RBP8.98□□□□□ -0.97
MARK3-212ENST00000558223 BRINP2Q9C0B6 783 aa8.98□□□□□ -0.97
MARK3-212ENST00000558223 RRP7AQ9Y3A4 280 aaKnown RBP8.98□□□□□ -0.97
MARK3-212ENST00000558223 V9GY48 417 aaPredicted RBP8.98□□□□□ -0.97
MARK3-212ENST00000558223 USP31Q70CQ4 1352 aa8.98□□□□□ -0.97
MARK3-212ENST00000558223 LGR5O75473 907 aa8.97□□□□□ -0.97
MARK3-212ENST00000558223 PRKAR2BP31323 418 aa8.97□□□□□ -0.97
MARK3-212ENST00000558223 PTK2Q05397 1052 aa8.97□□□□□ -0.97
MARK3-212ENST00000558223 PSME1Q06323 249 aa8.97□□□□□ -0.97
MARK3-212ENST00000558223 BMS1Q14692 1282 aaKnown RBP8.97□□□□□ -0.97
MARK3-212ENST00000558223 MVPQ14764 893 aaKnown RBP8.97□□□□□ -0.97
MARK3-212ENST00000558223 HSP90AB2PQ58FF8 381 aa8.97□□□□□ -0.97
MARK3-212ENST00000558223 C20orf194Q5TEA3 1177 aa8.97□□□□□ -0.97
MARK3-212ENST00000558223 TPCN2Q8NHX9 752 aa8.97□□□□□ -0.97
MARK3-212ENST00000558223 HELQQ8TDG4 1101 aa8.97□□□□□ -0.97
MARK3-212ENST00000558223 USP6P35125 1406 aa8.97□□□□□ -0.97
MARK3-212ENST00000558223 TLL1O43897 1013 aa8.96□□□□□ -0.98
MARK3-212ENST00000558223 ATF7IPQ6VMQ6 1270 aa8.96□□□□□ -0.98
MARK3-212ENST00000558223 NME9Q86XW9 330 aa8.96□□□□□ -0.98
MARK3-212ENST00000558223 FRAT1Q92837 279 aaPredicted RBP8.96□□□□□ -0.98
MARK3-212ENST00000558223 PRDM16Q9HAZ2 1276 aa8.96□□□□□ -0.98
MARK3-212ENST00000558223 SMC4Q9NTJ3 1288 aa8.96□□□□□ -0.98
MARK3-212ENST00000558223 BCCIPQ9P287 314 aaKnown RBP eCLIP8.96□□□□□ -0.98
MARK3-212ENST00000558223 DOLKQ9UPQ8 538 aa8.96□□□□□ -0.98
MARK3-212ENST00000558223 GPSM3Q9Y4H4 160 aa8.96□□□□□ -0.98
MARK3-212ENST00000558223 ACEP12821 1306 aa8.96□□□□□ -0.98
MARK3-212ENST00000558223 MON2Q7Z3U7 1717 aa8.95□□□□□ -0.98
MARK3-212ENST00000558223 HTATSF1O43719 755 aaKnown RBP8.95□□□□□ -0.98
MARK3-212ENST00000558223 EXOSC9Q06265 439 aaKnown RBP8.95□□□□□ -0.98
MARK3-212ENST00000558223 NAA30Q147X3 362 aaPredicted RBP8.95□□□□□ -0.98
MARK3-212ENST00000558223 OXLD1Q5BKU9 147 aa8.95□□□□□ -0.98
MARK3-212ENST00000558223 TAF7LQ5H9L4 462 aa8.95□□□□□ -0.98
MARK3-212ENST00000558223 JAZF1Q86VZ6 243 aa8.95□□□□□ -0.98
MARK3-212ENST00000558223 MRFAP1L1Q96HT8 127 aa8.95□□□□□ -0.98
MARK3-212ENST00000558223 CITED4Q96RK1 184 aa8.95□□□□□ -0.98
MARK3-212ENST00000558223 DMGDHQ9UI17 866 aaKnown RBP8.95□□□□□ -0.98
MARK3-212ENST00000558223 SOS1Q07889 1333 aaPredicted RBP8.95□□□□□ -0.98
MARK3-212ENST00000558223 PRR36Q9H6K5 1346 aa8.95□□□□□ -0.98
MARK3-212ENST00000558223 PARNO95453 639 aaKnown RBP8.94□□□□□ -0.98
MARK3-212ENST00000558223 ZNF853P0CG23 659 aa8.94□□□□□ -0.98
MARK3-212ENST00000558223 GGCXP38435 758 aa8.94□□□□□ -0.98
MARK3-212ENST00000558223 EHHADHQ08426 723 aa8.94□□□□□ -0.98
MARK3-212ENST00000558223 HDAC1Q13547 482 aaPredicted RBP8.94□□□□□ -0.98
MARK3-212ENST00000558223 TSGA10IPQ3SY00 556 aa8.94□□□□□ -0.98
MARK3-212ENST00000558223 CAPN12Q6ZSI9 719 aa8.94□□□□□ -0.98
MARK3-212ENST00000558223 NGDNQ8NEJ9 315 aaKnown RBP8.94□□□□□ -0.98
MARK3-212ENST00000558223 DMRTB1Q96MA1 342 aa8.94□□□□□ -0.98
MARK3-212ENST00000558223 API5Q9BZZ5 524 aaKnown RBP8.94□□□□□ -0.98
MARK3-212ENST00000558223 OVOS2A0A0J9YW53 1432 aa8.94□□□□□ -0.98
MARK3-212ENST00000558223 OVOS2Q6IE36 1432 aa8.94□□□□□ -0.98
MARK3-212ENST00000558223 SSH2Q76I76 1423 aa8.94□□□□□ -0.98
MARK3-212ENST00000558223 PTPRUQ92729 1446 aa8.94□□□□□ -0.98
MARK3-212ENST00000558223 LRRC7Q96NW7 1537 aa8.94□□□□□ -0.98
MARK3-212ENST00000558223 RNF223E7ERA6 249 aa8.93□□□□□ -0.98
MARK3-212ENST00000558223 NPR3P17342 541 aa8.93□□□□□ -0.98
MARK3-212ENST00000558223 CEBPAP49715 358 aaPredicted RBP8.93□□□□□ -0.98
MARK3-212ENST00000558223 FKBP5Q13451 457 aaPredicted RBP8.93□□□□□ -0.98
MARK3-212ENST00000558223 Q3C1V9 767 aa8.93□□□□□ -0.98
MARK3-212ENST00000558223 ZNF654Q8IZM8 581 aa8.93□□□□□ -0.98
MARK3-212ENST00000558223 MORC4Q8TE76 937 aa8.93□□□□□ -0.98
MARK3-212ENST00000558223 SLC26A8Q96RN1 970 aa8.93□□□□□ -0.98
MARK3-212ENST00000558223 BABAM1Q9NWV8 329 aa8.93□□□□□ -0.98
MARK3-212ENST00000558223 MAGEC2Q9UBF1 373 aaPredicted RBP8.93□□□□□ -0.98
MARK3-212ENST00000558223 COL4A3BPQ9Y5P4 624 aa8.93□□□□□ -0.98
MARK3-212ENST00000558223 SBNO1A3KN83 1393 aa8.93□□□□□ -0.98
MARK3-212ENST00000558223 C3P01024 1663 aa8.93□□□□□ -0.98
MARK3-212ENST00000558223 AKAP12Q02952 1782 aa8.93□□□□□ -0.98
MARK3-212ENST00000558223 FER1L4A9Z1Z3 1794 aa8.92□□□□□ -0.98
MARK3-212ENST00000558223 ITSN1Q15811 1721 aa8.92□□□□□ -0.98
MARK3-212ENST00000558223 ARHGEF10O15013 1369 aa8.92□□□□□ -0.98
MARK3-212ENST00000558223 FLT4P35916 1363 aa8.92□□□□□ -0.98
MARK3-212ENST00000558223 WEE1P30291 646 aa8.92□□□□□ -0.98
MARK3-212ENST00000558223 DSC3Q14574 896 aa8.92□□□□□ -0.98
MARK3-212ENST00000558223 PUS10Q3MIT2 529 aaKnown RBP8.92□□□□□ -0.98
MARK3-212ENST00000558223 FILIP1Q7Z7B0 1213 aa8.92□□□□□ -0.98
MARK3-212ENST00000558223 GAS2L2Q8NHY3 880 aa8.92□□□□□ -0.98
MARK3-212ENST00000558223 EMID1Q96A84 441 aaPredicted RBP8.92□□□□□ -0.98
MARK3-212ENST00000558223 UPF2Q9HAU5 1272 aaKnown RBP8.92□□□□□ -0.98
MARK3-212ENST00000558223 CYLDQ9NQC7 956 aa8.92□□□□□ -0.98
MARK3-212ENST00000558223 RNF19AQ9NV58 838 aa8.92□□□□□ -0.98
MARK3-212ENST00000558223 EMILIN1Q9Y6C2 1016 aa8.92□□□□□ -0.98
MARK3-212ENST00000558223 MRPL42Q9Y6G3 142 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms