RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 NF2P35240 595 aa6.79□□□□□ -1.32
SPG11-208ENST00000558155 ZNF280AP59817 542 aaPredicted RBP6.79□□□□□ -1.32
SPG11-208ENST00000558155 TTLL12Q14166 644 aaPredicted RBP6.79□□□□□ -1.32
SPG11-208ENST00000558155 INTS3Q68E01 1043 aaKnown RBP6.79□□□□□ -1.32
SPG11-208ENST00000558155 LRP10Q7Z4F1 713 aa6.79□□□□□ -1.32
SPG11-208ENST00000558155 SPNS2Q8IVW8 549 aa6.79□□□□□ -1.32
SPG11-208ENST00000558155 TBC1D16Q8TBP0 767 aa6.79□□□□□ -1.32
SPG11-208ENST00000558155 CCER1Q8TC90 406 aaPredicted RBP6.79□□□□□ -1.32
SPG11-208ENST00000558155 XAGE3Q8WTP9 111 aa6.79□□□□□ -1.32
SPG11-208ENST00000558155 CELF1Q92879 486 aaKnown RBP6.79□□□□□ -1.32
SPG11-208ENST00000558155 TAF1P21675 1872 aa6.79□□□□□ -1.32
SPG11-208ENST00000558155 PITPNM2Q9BZ72 1349 aa6.78□□□□□ -1.32
SPG11-208ENST00000558155 KDM3BQ7LBC6 1761 aa6.78□□□□□ -1.32
SPG11-208ENST00000558155 ALDH1A1P00352 501 aa6.78□□□□□ -1.32
SPG11-208ENST00000558155 ANXA1P04083 346 aa6.78□□□□□ -1.32
SPG11-208ENST00000558155 USP17L8P0C7I0 530 aa6.78□□□□□ -1.32
SPG11-208ENST00000558155 HSP90B1P14625 803 aaKnown RBP6.78□□□□□ -1.32
SPG11-208ENST00000558155 INHBEP58166 350 aa6.78□□□□□ -1.32
SPG11-208ENST00000558155 SREBF2Q12772 1141 aa6.78□□□□□ -1.32
SPG11-208ENST00000558155 PROSER3Q2NL68 480 aa6.78□□□□□ -1.32
SPG11-208ENST00000558155 RSBN1LQ6PCB5 846 aaPredicted RBP6.78□□□□□ -1.32
SPG11-208ENST00000558155 ANKRD13DQ6ZTN6 518 aa6.78□□□□□ -1.32
SPG11-208ENST00000558155 FAM89AQ96GI7 184 aa6.78□□□□□ -1.32
SPG11-208ENST00000558155 PLEKHF1Q96S99 279 aa6.78□□□□□ -1.32
SPG11-208ENST00000558155 ANKIB1Q9P2G1 1089 aa6.78□□□□□ -1.32
SPG11-208ENST00000558155 RTL9Q8NET4 1388 aa6.78□□□□□ -1.32
SPG11-208ENST00000558155 ASTN2O75129 1339 aaPredicted RBP6.77□□□□□ -1.32
SPG11-208ENST00000558155 MAPK8IP3Q9UPT6 1336 aa6.77□□□□□ -1.32
SPG11-208ENST00000558155 LAMB2P55268 1798 aa6.77□□□□□ -1.33
SPG11-208ENST00000558155 MOB2Q70IA6 237 aa6.77□□□□□ -1.33
SPG11-208ENST00000558155 ARMC9Q7Z3E5 817 aa6.77□□□□□ -1.33
SPG11-208ENST00000558155 PODNQ7Z5L7 613 aa6.77□□□□□ -1.33
SPG11-208ENST00000558155 OGFOD1Q8N543 542 aa6.77□□□□□ -1.33
SPG11-208ENST00000558155 PLBD2Q8NHP8 589 aa6.77□□□□□ -1.33
SPG11-208ENST00000558155 CFHR5Q9BXR6 569 aa6.77□□□□□ -1.33
SPG11-208ENST00000558155 MYOZ2Q9NPC6 264 aa6.77□□□□□ -1.33
SPG11-208ENST00000558155 PODXL2Q9NZ53 605 aa6.77□□□□□ -1.33
SPG11-208ENST00000558155 GGA1Q9UJY5 639 aa6.77□□□□□ -1.33
SPG11-208ENST00000558155 DLG5Q8TDM6 1919 aa6.77□□□□□ -1.33
SPG11-208ENST00000558155 USP17L3A6NCW0 530 aa6.76□□□□□ -1.33
SPG11-208ENST00000558155 USP17L4A6NCW7 530 aa6.76□□□□□ -1.33
SPG11-208ENST00000558155 IRS4O14654 1257 aaPredicted RBP6.76□□□□□ -1.33
SPG11-208ENST00000558155 UFL1O94874 794 aa6.76□□□□□ -1.33
SPG11-208ENST00000558155 MMP14P50281 582 aa6.76□□□□□ -1.33
SPG11-208ENST00000558155 RIPK4P57078 832 aa6.76□□□□□ -1.33
SPG11-208ENST00000558155 MKRN3Q13064 507 aaKnown RBP6.76□□□□□ -1.33
SPG11-208ENST00000558155 TRIM28Q13263 835 aaKnown RBP6.76□□□□□ -1.33
SPG11-208ENST00000558155 PRAMEF18Q5VWM3 479 aa6.76□□□□□ -1.33
SPG11-208ENST00000558155 USP17L1Q7RTZ2 530 aa6.76□□□□□ -1.33
SPG11-208ENST00000558155 MARVELD3Q96A59 401 aa6.76□□□□□ -1.33
SPG11-208ENST00000558155 GMLQ99445 158 aa6.76□□□□□ -1.33
SPG11-208ENST00000558155 ISCA1Q9BUE6 129 aa6.76□□□□□ -1.33
SPG11-208ENST00000558155 PAPPA2Q9BXP8 1791 aa6.75□□□□□ -1.33
SPG11-208ENST00000558155 DUOX1Q9NRD9 1551 aa6.75□□□□□ -1.33
SPG11-208ENST00000558155 MANSC4A6NHS7 340 aaPredicted RBP6.75□□□□□ -1.33
SPG11-208ENST00000558155 ATP5J2-PTCD1G3V325 749 aa6.75□□□□□ -1.33
SPG11-208ENST00000558155 ATP2B4P23634 1241 aa6.75□□□□□ -1.33
SPG11-208ENST00000558155 PTPN12Q05209 780 aaKnown RBP6.75□□□□□ -1.33
SPG11-208ENST00000558155 LMOD3Q0VAK6 560 aa6.75□□□□□ -1.33
SPG11-208ENST00000558155 RTL5Q5HYW3 569 aaPredicted RBP6.75□□□□□ -1.33
SPG11-208ENST00000558155 ZNF428Q96B54 188 aa6.75□□□□□ -1.33
SPG11-208ENST00000558155 SLC10A4Q96EP9 437 aa6.75□□□□□ -1.33
SPG11-208ENST00000558155 OCEL1Q9H607 264 aa6.75□□□□□ -1.33
SPG11-208ENST00000558155 TRIM17Q9Y577 477 aa6.75□□□□□ -1.33
SPG11-208ENST00000558155 LRRC37AA6NMS7 1700 aa6.74□□□□□ -1.33
SPG11-208ENST00000558155 DDX60Q8IY21 1712 aaKnown RBP6.74□□□□□ -1.33
SPG11-208ENST00000558155 PRKG1Q13976 671 aa6.74□□□□□ -1.33
SPG11-208ENST00000558155 NBPF9Q3BBW0 867 aa6.74□□□□□ -1.33
SPG11-208ENST00000558155 CCDC152Q4G0S7 254 aa6.74□□□□□ -1.33
SPG11-208ENST00000558155 SPRYD7Q5W111 196 aa6.74□□□□□ -1.33
SPG11-208ENST00000558155 OTUD7BQ6GQQ9 843 aa6.74□□□□□ -1.33
SPG11-208ENST00000558155 ANKRD18AQ8IVF6 992 aa6.74□□□□□ -1.33
SPG11-208ENST00000558155 ZBTB38Q8NAP3 1195 aaPredicted RBP6.74□□□□□ -1.33
SPG11-208ENST00000558155 FAM212AQ96EL1 285 aa6.74□□□□□ -1.33
SPG11-208ENST00000558155 ERO1AQ96HE7 468 aa6.74□□□□□ -1.33
SPG11-208ENST00000558155 R3HDMLQ9H3Y0 253 aa6.74□□□□□ -1.33
SPG11-208ENST00000558155 SEC31BQ9NQW1 1179 aa6.74□□□□□ -1.33
SPG11-208ENST00000558155 HYPKQ9NX55 129 aa6.74□□□□□ -1.33
SPG11-208ENST00000558155 CHPF2Q9P2E5 772 aa6.74□□□□□ -1.33
SPG11-208ENST00000558155 DBF4Q9UBU7 674 aaPredicted RBP6.74□□□□□ -1.33
SPG11-208ENST00000558155 SCAF8Q9UPN6 1271 aaKnown RBP6.74□□□□□ -1.33
SPG11-208ENST00000558155 SCN9AQ15858 1988 aa6.74□□□□□ -1.33
SPG11-208ENST00000558155 XDHP47989 1333 aa6.74□□□□□ -1.33
SPG11-208ENST00000558155 POTEB3A0JP26 581 aa6.73□□□□□ -1.33
SPG11-208ENST00000558155 CHL1O00533 1208 aa6.73□□□□□ -1.33
SPG11-208ENST00000558155 WNT10BO00744 389 aa6.73□□□□□ -1.33
SPG11-208ENST00000558155 PPP1R12BO60237 982 aaPredicted RBP6.73□□□□□ -1.33
SPG11-208ENST00000558155 PDE8AO60658 829 aa6.73□□□□□ -1.33
SPG11-208ENST00000558155 PYGBP11216 843 aa6.73□□□□□ -1.33
SPG11-208ENST00000558155 ARHGEF6Q15052 776 aa6.73□□□□□ -1.33
SPG11-208ENST00000558155 LDLRAD1Q5T700 205 aa6.73□□□□□ -1.33
SPG11-208ENST00000558155 HDGFL1Q5TGJ6 251 aa6.73□□□□□ -1.33
SPG11-208ENST00000558155 POTEBQ6S5H4 581 aa6.73□□□□□ -1.33
SPG11-208ENST00000558155 OTOP1Q7RTM1 612 aa6.73□□□□□ -1.33
SPG11-208ENST00000558155 RIC3Q7Z5B4 369 aa6.73□□□□□ -1.33
SPG11-208ENST00000558155 APOBEC3FQ8IUX4 373 aaKnown RBP6.73□□□□□ -1.33
SPG11-208ENST00000558155 FBXW7Q969H0 707 aa6.73□□□□□ -1.33
SPG11-208ENST00000558155 TMEM121BQ9BXQ6 578 aaPredicted RBP6.73□□□□□ -1.33
SPG11-208ENST00000558155 PCDHB8Q9UN66 801 aa6.73□□□□□ -1.33
SPG11-208ENST00000558155 ANGEL1Q9UNK9 670 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 218.1 ms