RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 COA1Q9GZY4 146 aa17.32■□□□□ 0.36
SNRPA1-204ENST00000558020 ZNF609O15014 1411 aa17.31■□□□□ 0.36
SNRPA1-204ENST00000558020 CSF1RP07333 972 aa17.31■□□□□ 0.36
SNRPA1-204ENST00000558020 KCNJ4P48050 445 aa17.31■□□□□ 0.36
SNRPA1-204ENST00000558020 RGMBQ6NW40 437 aa17.31■□□□□ 0.36
SNRPA1-204ENST00000558020 FAM9BQ8IZU0 186 aa17.31■□□□□ 0.36
SNRPA1-204ENST00000558020 MYOZ2Q9NPC6 264 aa17.31■□□□□ 0.36
SNRPA1-204ENST00000558020 GGA3Q9NZ52 723 aa17.31■□□□□ 0.36
SNRPA1-204ENST00000558020 MYH3P11055 1940 aa17.31■□□□□ 0.36
SNRPA1-204ENST00000558020 MYO3BQ8WXR4 1341 aa17.3■□□□□ 0.36
SNRPA1-204ENST00000558020 ANKRD18BA2A2Z9 1011 aa17.3■□□□□ 0.36
SNRPA1-204ENST00000558020 ADM5C9JUS6 153 aa17.3■□□□□ 0.36
SNRPA1-204ENST00000558020 STRIP1Q5VSL9 837 aa17.3■□□□□ 0.36
SNRPA1-204ENST00000558020 GMLQ99445 158 aa17.3■□□□□ 0.36
SNRPA1-204ENST00000558020 ZNF804BA4D1E1 1349 aa17.29■□□□□ 0.36
SNRPA1-204ENST00000558020 ZNF157P51786 506 aaPredicted RBP17.29■□□□□ 0.36
SNRPA1-204ENST00000558020 IFIT5Q13325 482 aaKnown RBP17.29■□□□□ 0.36
SNRPA1-204ENST00000558020 ANGEL2Q5VTE6 544 aaKnown RBP17.29■□□□□ 0.36
SNRPA1-204ENST00000558020 FBXW7Q969H0 707 aa17.29■□□□□ 0.36
SNRPA1-204ENST00000558020 POLR2AP24928 1970 aaKnown RBP17.29■□□□□ 0.36
SNRPA1-204ENST00000558020 SCN9AQ15858 1988 aa17.29■□□□□ 0.36
SNRPA1-204ENST00000558020 PITPNM2Q9BZ72 1349 aa17.28■□□□□ 0.36
SNRPA1-204ENST00000558020 CASP7P55210 303 aa17.28■□□□□ 0.36
SNRPA1-204ENST00000558020 FAM161AQ3B820 660 aa17.28■□□□□ 0.36
SNRPA1-204ENST00000558020 DLK2Q6UY11 383 aa17.28■□□□□ 0.36
SNRPA1-204ENST00000558020 THSD7BQ9C0I4 1608 aa17.28■□□□□ 0.36
SNRPA1-204ENST00000558020 WTIPA6NIX2 430 aaPredicted RBP17.27■□□□□ 0.36
SNRPA1-204ENST00000558020 FKBP1BP68106 108 aa17.27■□□□□ 0.36
SNRPA1-204ENST00000558020 DACT2Q5SW24 774 aa17.27■□□□□ 0.36
SNRPA1-204ENST00000558020 TTLL5Q6EMB2 1281 aa17.27■□□□□ 0.36
SNRPA1-204ENST00000558020 CDCA5Q96FF9 252 aa17.27■□□□□ 0.36
SNRPA1-204ENST00000558020 HDAC9Q9UKV0 1011 aa17.27■□□□□ 0.36
SNRPA1-204ENST00000558020 CHMP3Q9Y3E7 222 aa17.27■□□□□ 0.36
SNRPA1-204ENST00000558020 CHRNDQ07001 517 aa17.26■□□□□ 0.35
SNRPA1-204ENST00000558020 CCDC57Q2TAC2 916 aa17.26■□□□□ 0.35
SNRPA1-204ENST00000558020 BEND3Q5T5X7 828 aa17.26■□□□□ 0.35
SNRPA1-204ENST00000558020 REM2Q8IYK8 340 aaPredicted RBP17.26■□□□□ 0.35
SNRPA1-204ENST00000558020 C9orf78Q9NZ63 289 aaPredicted RBP17.26■□□□□ 0.35
SNRPA1-204ENST00000558020 F6X3S4 739 aa17.25■□□□□ 0.35
SNRPA1-204ENST00000558020 TAF7LQ5H9L4 462 aa17.25■□□□□ 0.35
SNRPA1-204ENST00000558020 ABHD8Q96I13 439 aa17.25■□□□□ 0.35
SNRPA1-204ENST00000558020 ASTN2O75129 1339 aaPredicted RBP17.24■□□□□ 0.35
SNRPA1-204ENST00000558020 GRM8O00222 908 aa17.24■□□□□ 0.35
SNRPA1-204ENST00000558020 ALDH1L1O75891 902 aa17.24■□□□□ 0.35
SNRPA1-204ENST00000558020 NF2P35240 595 aa17.24■□□□□ 0.35
SNRPA1-204ENST00000558020 FOXO4P98177 505 aa17.24■□□□□ 0.35
SNRPA1-204ENST00000558020 TXNRD3Q86VQ6 643 aa17.24■□□□□ 0.35
SNRPA1-204ENST00000558020 TSKSQ9UJT2 592 aa17.24■□□□□ 0.35
SNRPA1-204ENST00000558020 PSME4Q14997 1843 aa17.24■□□□□ 0.35
SNRPA1-204ENST00000558020 FAM155AB1AL88 458 aaPredicted RBP17.23■□□□□ 0.35
SNRPA1-204ENST00000558020 GTF2IP78347 998 aa17.23■□□□□ 0.35
SNRPA1-204ENST00000558020 KIF23Q02241 960 aaPredicted RBP17.23■□□□□ 0.35
SNRPA1-204ENST00000558020 SLC4A10Q6U841 1118 aa17.23■□□□□ 0.35
SNRPA1-204ENST00000558020 LMBR1LQ6UX01 489 aa17.23■□□□□ 0.35
SNRPA1-204ENST00000558020 SPINK5Q9NQ38 1064 aaPredicted RBP17.23■□□□□ 0.35
SNRPA1-204ENST00000558020 SPEF2Q9C093 1822 aa17.23■□□□□ 0.35
SNRPA1-204ENST00000558020 NBPF9Q3BBW0 867 aa17.22■□□□□ 0.35
SNRPA1-204ENST00000558020 LDHAL6AQ6ZMR3 332 aa17.22■□□□□ 0.35
SNRPA1-204ENST00000558020 ZNF804AQ7Z570 1209 aa17.22■□□□□ 0.35
SNRPA1-204ENST00000558020 SRCIN1Q9C0H9 1055 aa17.22■□□□□ 0.35
SNRPA1-204ENST00000558020 CD209Q9NNX6 404 aa17.22■□□□□ 0.35
SNRPA1-204ENST00000558020 SAGE1Q9NXZ1 904 aa17.22■□□□□ 0.35
SNRPA1-204ENST00000558020 WNT10BO00744 389 aa17.21■□□□□ 0.35
SNRPA1-204ENST00000558020 TTLL12Q14166 644 aaPredicted RBP17.21■□□□□ 0.35
SNRPA1-204ENST00000558020 C15orf52Q6ZUT6 534 aaKnown RBP17.21■□□□□ 0.35
SNRPA1-204ENST00000558020 KIAA0825Q8IV33 1275 aa17.21■□□□□ 0.35
SNRPA1-204ENST00000558020 MXD3Q9BW11 206 aa17.21■□□□□ 0.35
SNRPA1-204ENST00000558020 CNNM1Q9NRU3 951 aa17.21■□□□□ 0.35
SNRPA1-204ENST00000558020 TAF5LO75529 589 aa17.2■□□□□ 0.34
SNRPA1-204ENST00000558020 SLC10A3P09131 477 aa17.2■□□□□ 0.34
SNRPA1-204ENST00000558020 APOBEC3FQ8IUX4 373 aaKnown RBP17.2■□□□□ 0.34
SNRPA1-204ENST00000558020 HELBQ8NG08 1087 aaPredicted RBP17.2■□□□□ 0.34
SNRPA1-204ENST00000558020 ZIC5Q96T25 663 aa17.2■□□□□ 0.34
SNRPA1-204ENST00000558020 KLRK1P26718 216 aa17.19■□□□□ 0.34
SNRPA1-204ENST00000558020 DLGAP5Q15398 846 aa17.19■□□□□ 0.34
SNRPA1-204ENST00000558020 CCDC85CA6NKD9 419 aa17.18■□□□□ 0.34
SNRPA1-204ENST00000558020 MYO1BO43795 1136 aa17.18■□□□□ 0.34
SNRPA1-204ENST00000558020 PLIN1O60240 522 aa17.18■□□□□ 0.34
SNRPA1-204ENST00000558020 TRPA1O75762 1119 aa17.18■□□□□ 0.34
SNRPA1-204ENST00000558020 CSRNP1Q96S65 589 aa17.18■□□□□ 0.34
SNRPA1-204ENST00000558020 UBE2Q2LH0YL09 131 aa17.17■□□□□ 0.34
SNRPA1-204ENST00000558020 SASH1O94885 1247 aa17.17■□□□□ 0.34
SNRPA1-204ENST00000558020 IL1R1P14778 569 aa17.17■□□□□ 0.34
SNRPA1-204ENST00000558020 FKBP1AP62942 108 aaKnown RBP17.17■□□□□ 0.34
SNRPA1-204ENST00000558020 ARMC9Q7Z3E5 817 aa17.17■□□□□ 0.34
SNRPA1-204ENST00000558020 RNF186Q9NXI6 227 aa17.17■□□□□ 0.34
SNRPA1-204ENST00000558020 E9PSI1 815 aa17.16■□□□□ 0.34
SNRPA1-204ENST00000558020 DGKZQ13574 1117 aa17.16■□□□□ 0.34
SNRPA1-204ENST00000558020 EPHA10Q5JZY3 1008 aa17.16■□□□□ 0.34
SNRPA1-204ENST00000558020 PRAMEF18Q5VWM3 479 aa17.16■□□□□ 0.34
SNRPA1-204ENST00000558020 ZNF594Q96JF6 807 aaPredicted RBP17.16■□□□□ 0.34
SNRPA1-204ENST00000558020 SCAF8Q9UPN6 1271 aaKnown RBP17.16■□□□□ 0.34
SNRPA1-204ENST00000558020 PAPPA2Q9BXP8 1791 aa17.15■□□□□ 0.34
SNRPA1-204ENST00000558020 SNAP23O00161 211 aa17.15■□□□□ 0.34
SNRPA1-204ENST00000558020 UBE4AQ14139 1066 aa17.15■□□□□ 0.34
SNRPA1-204ENST00000558020 RASAL3Q86YV0 1011 aa17.15■□□□□ 0.34
SNRPA1-204ENST00000558020 MTMR14Q8NCE2 650 aa17.15■□□□□ 0.34
SNRPA1-204ENST00000558020 MCOLN1Q9GZU1 580 aa17.15■□□□□ 0.34
SNRPA1-204ENST00000558020 PTPRCP08575 1304 aa17.15■□□□□ 0.34
SNRPA1-204ENST00000558020 ZNF521Q96K83 1311 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms