RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 PLA2G12BQ9BX93 195 aa20.44■□□□□ 0.86
SCFD1-224ENST00000557713 PITPNM2Q9BZ72 1349 aa20.44■□□□□ 0.86
SCFD1-224ENST00000557713 RGS19P49795 217 aa20.43■□□□□ 0.86
SCFD1-224ENST00000557713 CASP7P55210 303 aa20.43■□□□□ 0.86
SCFD1-224ENST00000557713 GCKRQ14397 625 aa20.43■□□□□ 0.86
SCFD1-224ENST00000557713 DACT2Q5SW24 774 aa20.43■□□□□ 0.86
SCFD1-224ENST00000557713 TXNRD3Q86VQ6 643 aa20.43■□□□□ 0.86
SCFD1-224ENST00000557713 SAGE1Q9NXZ1 904 aa20.43■□□□□ 0.86
SCFD1-224ENST00000557713 LEMD3Q9Y2U8 911 aa20.43■□□□□ 0.86
SCFD1-224ENST00000557713 MYH3P11055 1940 aa20.43■□□□□ 0.86
SCFD1-224ENST00000557713 CASP8AP2Q9UKL3 1982 aa20.43■□□□□ 0.86
SCFD1-224ENST00000557713 CSF1RP07333 972 aa20.42■□□□□ 0.86
SCFD1-224ENST00000557713 FKBP1BP68106 108 aa20.42■□□□□ 0.86
SCFD1-224ENST00000557713 FLIIQ13045 1269 aa20.42■□□□□ 0.86
SCFD1-224ENST00000557713 CSRNP1Q96S65 589 aa20.42■□□□□ 0.86
SCFD1-224ENST00000557713 MXD3Q9BW11 206 aa20.42■□□□□ 0.86
SCFD1-224ENST00000557713 COA1Q9GZY4 146 aa20.42■□□□□ 0.86
SCFD1-224ENST00000557713 RNF186Q9NXI6 227 aa20.42■□□□□ 0.86
SCFD1-224ENST00000557713 IGHMBP2P38935 993 aaKnown RBP20.41■□□□□ 0.86
SCFD1-224ENST00000557713 DGKZQ13574 1117 aa20.41■□□□□ 0.86
SCFD1-224ENST00000557713 NBPF9Q3BBW0 867 aa20.41■□□□□ 0.86
SCFD1-224ENST00000557713 STRIP1Q5VSL9 837 aa20.41■□□□□ 0.86
SCFD1-224ENST00000557713 ITGA6P23229 1130 aa20.4■□□□□ 0.86
SCFD1-224ENST00000557713 FAM161AQ3B820 660 aa20.4■□□□□ 0.86
SCFD1-224ENST00000557713 DNAAF4Q8WXU2 420 aa20.4■□□□□ 0.86
SCFD1-224ENST00000557713 SPEF2Q9C093 1822 aa20.4■□□□□ 0.86
SCFD1-224ENST00000557713 ZNF646O15015 1829 aaPredicted RBP20.39■□□□□ 0.86
SCFD1-224ENST00000557713 ZNF804BA4D1E1 1349 aa20.39■□□□□ 0.85
SCFD1-224ENST00000557713 MYO3BQ8WXR4 1341 aa20.39■□□□□ 0.85
SCFD1-224ENST00000557713 FANCIQ9NVI1 1328 aa20.39■□□□□ 0.85
SCFD1-224ENST00000557713 VAMP4O75379 141 aa20.39■□□□□ 0.85
SCFD1-224ENST00000557713 TRPA1O75762 1119 aa20.39■□□□□ 0.85
SCFD1-224ENST00000557713 RASAL3Q86YV0 1011 aa20.39■□□□□ 0.85
SCFD1-224ENST00000557713 LINS1Q8NG48 757 aa20.39■□□□□ 0.85
SCFD1-224ENST00000557713 ANKRD2Q9GZV1 360 aa20.39■□□□□ 0.85
SCFD1-224ENST00000557713 SCAF8Q9UPN6 1271 aaKnown RBP20.39■□□□□ 0.85
SCFD1-224ENST00000557713 FKBP5Q13451 457 aaPredicted RBP20.38■□□□□ 0.85
SCFD1-224ENST00000557713 WDR63Q8IWG1 891 aa20.38■□□□□ 0.85
SCFD1-224ENST00000557713 REM2Q8IYK8 340 aaPredicted RBP20.38■□□□□ 0.85
SCFD1-224ENST00000557713 OGFOD1Q8N543 542 aa20.38■□□□□ 0.85
SCFD1-224ENST00000557713 MYH16Q9H6N6 1097 aa20.38■□□□□ 0.85
SCFD1-224ENST00000557713 WNT10BO00744 389 aa20.37■□□□□ 0.85
SCFD1-224ENST00000557713 KLRK1P26718 216 aa20.37■□□□□ 0.85
SCFD1-224ENST00000557713 MMP14P50281 582 aa20.37■□□□□ 0.85
SCFD1-224ENST00000557713 PRAMEF18Q5VWM3 479 aa20.37■□□□□ 0.85
SCFD1-224ENST00000557713 MOB2Q70IA6 237 aa20.37■□□□□ 0.85
SCFD1-224ENST00000557713 MPHOSPH8Q99549 860 aa20.37■□□□□ 0.85
SCFD1-224ENST00000557713 PAPPA2Q9BXP8 1791 aa20.36■□□□□ 0.85
SCFD1-224ENST00000557713 MLLT1Q03111 559 aaPredicted RBP20.36■□□□□ 0.85
SCFD1-224ENST00000557713 TTLL5Q6EMB2 1281 aa20.36■□□□□ 0.85
SCFD1-224ENST00000557713 FBXW7Q969H0 707 aa20.36■□□□□ 0.85
SCFD1-224ENST00000557713 UBE2Q2LH0YL09 131 aa20.35■□□□□ 0.85
SCFD1-224ENST00000557713 EXOSC9Q06265 439 aaKnown RBP20.35■□□□□ 0.85
SCFD1-224ENST00000557713 CHRNDQ07001 517 aa20.35■□□□□ 0.85
SCFD1-224ENST00000557713 MRS2Q9HD23 443 aa20.35■□□□□ 0.85
SCFD1-224ENST00000557713 IRS2Q9Y4H2 1338 aa20.34■□□□□ 0.85
SCFD1-224ENST00000557713 FOXO4P98177 505 aa20.34■□□□□ 0.85
SCFD1-224ENST00000557713 ZBED3Q96IU2 234 aaPredicted RBP20.34■□□□□ 0.85
SCFD1-224ENST00000557713 SALL2Q9Y467 1007 aaPredicted RBP20.34■□□□□ 0.85
SCFD1-224ENST00000557713 ANKRD18BA2A2Z9 1011 aa20.33■□□□□ 0.85
SCFD1-224ENST00000557713 GTF2IP78347 998 aa20.33■□□□□ 0.85
SCFD1-224ENST00000557713 BEND3Q5T5X7 828 aa20.33■□□□□ 0.85
SCFD1-224ENST00000557713 CD209Q9NNX6 404 aa20.33■□□□□ 0.85
SCFD1-224ENST00000557713 AKAP11Q9UKA4 1901 aa20.33■□□□□ 0.84
SCFD1-224ENST00000557713 SASH1O94885 1247 aa20.32■□□□□ 0.84
SCFD1-224ENST00000557713 C15orf52Q6ZUT6 534 aaKnown RBP20.32■□□□□ 0.84
SCFD1-224ENST00000557713 KIAA0825Q8IV33 1275 aa20.32■□□□□ 0.84
SCFD1-224ENST00000557713 CACNA1FO60840 1977 aa20.32■□□□□ 0.84
SCFD1-224ENST00000557713 F6X3S4 739 aa20.31■□□□□ 0.84
SCFD1-224ENST00000557713 SNAP23O00161 211 aa20.31■□□□□ 0.84
SCFD1-224ENST00000557713 KCNJ4P48050 445 aa20.31■□□□□ 0.84
SCFD1-224ENST00000557713 SPINK5Q9NQ38 1064 aaPredicted RBP20.31■□□□□ 0.84
SCFD1-224ENST00000557713 HDAC9Q9UKV0 1011 aa20.31■□□□□ 0.84
SCFD1-224ENST00000557713 TAF5LO75529 589 aa20.3■□□□□ 0.84
SCFD1-224ENST00000557713 NF2P35240 595 aa20.3■□□□□ 0.84
SCFD1-224ENST00000557713 IFIT5Q13325 482 aaKnown RBP20.3■□□□□ 0.84
SCFD1-224ENST00000557713 HELBQ8NG08 1087 aaPredicted RBP20.3■□□□□ 0.84
SCFD1-224ENST00000557713 TM4SF4P48230 202 aa20.29■□□□□ 0.84
SCFD1-224ENST00000557713 TTLL12Q14166 644 aaPredicted RBP20.29■□□□□ 0.84
SCFD1-224ENST00000557713 APOBEC3FQ8IUX4 373 aaKnown RBP20.29■□□□□ 0.84
SCFD1-224ENST00000557713 CERS5Q8N5B7 392 aa20.29■□□□□ 0.84
SCFD1-224ENST00000557713 ANP32CO43423 234 aa20.28■□□□□ 0.84
SCFD1-224ENST00000557713 EPHA10Q5JZY3 1008 aa20.28■□□□□ 0.84
SCFD1-224ENST00000557713 LMBR1LQ6UX01 489 aa20.28■□□□□ 0.84
SCFD1-224ENST00000557713 IL1R1P14778 569 aa20.27■□□□□ 0.84
SCFD1-224ENST00000557713 PTPN12Q05209 780 aaKnown RBP20.27■□□□□ 0.84
SCFD1-224ENST00000557713 LDLRAD1Q5T700 205 aa20.27■□□□□ 0.84
SCFD1-224ENST00000557713 CTU1Q7Z7A3 348 aaKnown RBP20.27■□□□□ 0.84
SCFD1-224ENST00000557713 MTMR14Q8NCE2 650 aa20.27■□□□□ 0.84
SCFD1-224ENST00000557713 CHMP3Q9Y3E7 222 aa20.27■□□□□ 0.84
SCFD1-224ENST00000557713 TBC1D8O95759 1140 aa20.26■□□□□ 0.83
SCFD1-224ENST00000557713 DLGAP5Q15398 846 aa20.26■□□□□ 0.83
SCFD1-224ENST00000557713 ARMC9Q7Z3E5 817 aa20.26■□□□□ 0.83
SCFD1-224ENST00000557713 GRM8O00222 908 aa20.25■□□□□ 0.83
SCFD1-224ENST00000557713 PRKG1Q13976 671 aa20.25■□□□□ 0.83
SCFD1-224ENST00000557713 ZNF804AQ7Z570 1209 aa20.25■□□□□ 0.83
SCFD1-224ENST00000557713 ZNF594Q96JF6 807 aaPredicted RBP20.25■□□□□ 0.83
SCFD1-224ENST00000557713 DEFB129Q9H1M3 183 aa20.25■□□□□ 0.83
SCFD1-224ENST00000557713 FKBP1AP62942 108 aaKnown RBP20.24■□□□□ 0.83
SCFD1-224ENST00000557713 CCDC57Q2TAC2 916 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms