RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 PBX4Q9BYU1 374 aa5.87□□□□□ -1.47
GPHN-216ENST00000557678 SH2B1Q9NRF2 756 aaPredicted RBP5.87□□□□□ -1.47
GPHN-216ENST00000557678 A6NHS1 94 aa5.86□□□□□ -1.47
GPHN-216ENST00000557678 FSCN2O14926 492 aa5.86□□□□□ -1.47
GPHN-216ENST00000557678 FSTP19883 344 aa5.86□□□□□ -1.47
GPHN-216ENST00000557678 DUOXA2Q1HG44 320 aa5.86□□□□□ -1.47
GPHN-216ENST00000557678 DZIP1LQ8IYY4 767 aaKnown RBP5.86□□□□□ -1.47
GPHN-216ENST00000557678 C1orf127Q8N9H9 656 aa5.86□□□□□ -1.47
GPHN-216ENST00000557678 GTF3C2Q8WUA4 911 aaPredicted RBP5.86□□□□□ -1.47
GPHN-216ENST00000557678 SLC7A3Q8WY07 619 aa5.86□□□□□ -1.47
GPHN-216ENST00000557678 CNTN3Q9P232 1028 aa5.86□□□□□ -1.47
GPHN-216ENST00000557678 HYAL3O43820 417 aaPredicted RBP5.85□□□□□ -1.47
GPHN-216ENST00000557678 KIF4AO95239 1232 aa5.85□□□□□ -1.47
GPHN-216ENST00000557678 WISP1O95388 367 aa5.85□□□□□ -1.47
GPHN-216ENST00000557678 EPHA1P21709 976 aa5.85□□□□□ -1.47
GPHN-216ENST00000557678 MPSTP25325 297 aa5.85□□□□□ -1.47
GPHN-216ENST00000557678 MTMR3Q13615 1198 aa5.85□□□□□ -1.47
GPHN-216ENST00000557678 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.85□□□□□ -1.47
GPHN-216ENST00000557678 CEP41Q9BYV8 373 aa5.85□□□□□ -1.47
GPHN-216ENST00000557678 SEC31BQ9NQW1 1179 aa5.85□□□□□ -1.47
GPHN-216ENST00000557678 KCNK4Q9NYG8 393 aa5.85□□□□□ -1.47
GPHN-216ENST00000557678 DDX3YO15523 660 aaKnown RBP5.84□□□□□ -1.47
GPHN-216ENST00000557678 DHX15O43143 795 aaKnown RBP5.84□□□□□ -1.47
GPHN-216ENST00000557678 SART1O43290 800 aaKnown RBP5.84□□□□□ -1.47
GPHN-216ENST00000557678 TRPA1O75762 1119 aa5.84□□□□□ -1.47
GPHN-216ENST00000557678 ABL1P00519 1130 aa5.84□□□□□ -1.47
GPHN-216ENST00000557678 PDGFAP04085 211 aa5.84□□□□□ -1.47
GPHN-216ENST00000557678 ACPPP15309 386 aa5.84□□□□□ -1.47
GPHN-216ENST00000557678 MZF1P28698 734 aaPredicted RBP5.84□□□□□ -1.47
GPHN-216ENST00000557678 EIF1AXP47813 144 aaKnown RBP5.84□□□□□ -1.47
GPHN-216ENST00000557678 ALKBH2Q6NS38 261 aa5.84□□□□□ -1.47
GPHN-216ENST00000557678 CEP120Q8N960 986 aa5.84□□□□□ -1.47
GPHN-216ENST00000557678 KLHL23Q8NBE8 558 aa5.84□□□□□ -1.47
GPHN-216ENST00000557678 UBASH3BQ8TF42 649 aa5.84□□□□□ -1.47
GPHN-216ENST00000557678 POP1Q99575 1024 aaKnown RBP5.84□□□□□ -1.47
GPHN-216ENST00000557678 GGNBP2Q9H3C7 697 aa5.84□□□□□ -1.47
GPHN-216ENST00000557678 PCMTD2Q9NV79 361 aa5.84□□□□□ -1.47
GPHN-216ENST00000557678 STOML1Q9UBI4 398 aa5.84□□□□□ -1.47
GPHN-216ENST00000557678 RNF112Q9ULX5 631 aa5.84□□□□□ -1.47
GPHN-216ENST00000557678 MTMR7Q9Y216 660 aa5.84□□□□□ -1.47
GPHN-216ENST00000557678 RAXQ9Y2V3 346 aa5.84□□□□□ -1.47
GPHN-216ENST00000557678 PDE2AO00408 941 aaPredicted RBP5.83□□□□□ -1.48
GPHN-216ENST00000557678 SSTR4P31391 388 aa5.83□□□□□ -1.48
GPHN-216ENST00000557678 ARL4DP49703 201 aa5.83□□□□□ -1.48
GPHN-216ENST00000557678 NLRP12P59046 1061 aa5.83□□□□□ -1.48
GPHN-216ENST00000557678 ADAMTSL4Q6UY14 1074 aa5.83□□□□□ -1.48
GPHN-216ENST00000557678 PMEPA1Q969W9 287 aa5.83□□□□□ -1.48
GPHN-216ENST00000557678 UTP4Q969X6 686 aaKnown RBP5.83□□□□□ -1.48
GPHN-216ENST00000557678 KLHDC7BQ96G42 594 aa5.83□□□□□ -1.48
GPHN-216ENST00000557678 UBL7Q96S82 380 aaPredicted RBP5.83□□□□□ -1.48
GPHN-216ENST00000557678 GOLGA2P5Q9HBQ8 144 aa5.83□□□□□ -1.48
GPHN-216ENST00000557678 POLIQ9UNA4 740 aa5.83□□□□□ -1.48
GPHN-216ENST00000557678 H3BRJ5 948 aa5.82□□□□□ -1.48
GPHN-216ENST00000557678 PHACTR2O75167 634 aa5.82□□□□□ -1.48
GPHN-216ENST00000557678 PPP1R15AO75807 674 aaPredicted RBP5.82□□□□□ -1.48
GPHN-216ENST00000557678 LCE1DQ5T752 114 aa5.82□□□□□ -1.48
GPHN-216ENST00000557678 KCNF1Q9H3M0 494 aa5.82□□□□□ -1.48
GPHN-216ENST00000557678 SALL4Q9UJQ4 1053 aa5.82□□□□□ -1.48
GPHN-216ENST00000557678 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.82□□□□□ -1.48
GPHN-216ENST00000557678 GSC2O15499 205 aa5.81□□□□□ -1.48
GPHN-216ENST00000557678 PIP4K2BP78356 416 aa5.81□□□□□ -1.48
GPHN-216ENST00000557678 ASAP3Q8TDY4 903 aa5.81□□□□□ -1.48
GPHN-216ENST00000557678 ADAM19Q9H013 955 aa5.81□□□□□ -1.48
GPHN-216ENST00000557678 ANO2Q9NQ90 1003 aa5.81□□□□□ -1.48
GPHN-216ENST00000557678 CARNS1A5YM72 827 aa5.8□□□□□ -1.48
GPHN-216ENST00000557678 EREGO14944 169 aa5.8□□□□□ -1.48
GPHN-216ENST00000557678 ADAM11O75078 769 aa5.8□□□□□ -1.48
GPHN-216ENST00000557678 FAM13AO94988 1023 aa5.8□□□□□ -1.48
GPHN-216ENST00000557678 IGLV1-40P01703 118 aa5.8□□□□□ -1.48
GPHN-216ENST00000557678 SSFA2P28290 1259 aa5.8□□□□□ -1.48
GPHN-216ENST00000557678 FDX2Q6P4F2 183 aa5.8□□□□□ -1.48
GPHN-216ENST00000557678 XKR5Q6UX68 686 aa5.8□□□□□ -1.48
GPHN-216ENST00000557678 Q6ZS46 218 aa5.8□□□□□ -1.48
GPHN-216ENST00000557678 KIAA1211Q6ZU35 1233 aa5.8□□□□□ -1.48
GPHN-216ENST00000557678 C14orf37Q86TY3 774 aa5.8□□□□□ -1.48
GPHN-216ENST00000557678 SLC51AQ86UW1 340 aa5.8□□□□□ -1.48
GPHN-216ENST00000557678 FOXD4L4Q8WXT5 416 aaPredicted RBP5.8□□□□□ -1.48
GPHN-216ENST00000557678 HHIPQ96QV1 700 aa5.8□□□□□ -1.48
GPHN-216ENST00000557678 OSMRQ99650 979 aa5.8□□□□□ -1.48
GPHN-216ENST00000557678 RUSC1Q9BVN2 902 aa5.8□□□□□ -1.48
GPHN-216ENST00000557678 DZANK1Q9NVP4 752 aa5.8□□□□□ -1.48
GPHN-216ENST00000557678 TMEM88BA6NKF7 163 aa5.79□□□□□ -1.48
GPHN-216ENST00000557678 GAS2O43903 313 aaKnown RBP5.79□□□□□ -1.48
GPHN-216ENST00000557678 EDN3P14138 238 aa5.79□□□□□ -1.48
GPHN-216ENST00000557678 USP5P45974 858 aa5.79□□□□□ -1.48
GPHN-216ENST00000557678 SNX29Q8TEQ0 813 aa5.79□□□□□ -1.48
GPHN-216ENST00000557678 USP26Q9BXU7 913 aa5.79□□□□□ -1.48
GPHN-216ENST00000557678 OSGEPQ9NPF4 335 aa5.79□□□□□ -1.48
GPHN-216ENST00000557678 FOXD3Q9UJU5 478 aaPredicted RBP5.79□□□□□ -1.48
GPHN-216ENST00000557678 HMX2A2RU54 273 aa5.78□□□□□ -1.48
GPHN-216ENST00000557678 TNFRSF21O75509 655 aa5.78□□□□□ -1.48
GPHN-216ENST00000557678 BMP3P12645 472 aa5.78□□□□□ -1.48
GPHN-216ENST00000557678 RXRBP28702 533 aa5.78□□□□□ -1.48
GPHN-216ENST00000557678 EHHADHQ08426 723 aa5.78□□□□□ -1.48
GPHN-216ENST00000557678 C19orf57Q0VDD7 668 aa5.78□□□□□ -1.48
GPHN-216ENST00000557678 ZNF211Q13398 564 aaPredicted RBP5.78□□□□□ -1.48
GPHN-216ENST00000557678 IKBKEQ14164 716 aa5.78□□□□□ -1.48
GPHN-216ENST00000557678 UVSSAQ2YD98 709 aa5.78□□□□□ -1.48
GPHN-216ENST00000557678 TRIM42Q8IWZ5 723 aa5.78□□□□□ -1.48
GPHN-216ENST00000557678 ARMC10Q8N2F6 343 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms