RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 TTC5Q8N0Z6 440 aa10.73□□□□□ -0.69
RD3L-201ENST00000557640 TAF1P21675 1872 aa10.72□□□□□ -0.69
RD3L-201ENST00000557640 PER1O15534 1290 aaPredicted RBP10.72□□□□□ -0.69
RD3L-201ENST00000557640 DIAPH1O60610 1272 aaKnown RBP10.72□□□□□ -0.69
RD3L-201ENST00000557640 EAPPQ56P03 285 aaPredicted RBP10.72□□□□□ -0.69
RD3L-201ENST00000557640 CC2D1BQ5T0F9 858 aaKnown RBP10.72□□□□□ -0.69
RD3L-201ENST00000557640 MAP1SQ66K74 1059 aaPredicted RBP10.72□□□□□ -0.69
RD3L-201ENST00000557640 NBPF10Q6P3W6 841 aaKnown RBP10.72□□□□□ -0.69
RD3L-201ENST00000557640 NBPF15Q8N660 670 aa10.72□□□□□ -0.69
RD3L-201ENST00000557640 MASTLQ96GX5 879 aa10.72□□□□□ -0.69
RD3L-201ENST00000557640 PHACTR3Q96KR7 559 aa10.72□□□□□ -0.69
RD3L-201ENST00000557640 ATP13A2Q9NQ11 1180 aa10.72□□□□□ -0.69
RD3L-201ENST00000557640 TIMELESSQ9UNS1 1208 aa10.72□□□□□ -0.69
RD3L-201ENST00000557640 USP16Q9Y5T5 823 aa10.72□□□□□ -0.69
RD3L-201ENST00000557640 CASP8AP2Q9UKL3 1982 aa10.72□□□□□ -0.69
RD3L-201ENST00000557640 KLRG2A4D1S0 409 aaPredicted RBP10.71□□□□□ -0.69
RD3L-201ENST00000557640 RASSF10A6NK89 507 aa10.71□□□□□ -0.69
RD3L-201ENST00000557640 TMEM88BA6NKF7 163 aa10.71□□□□□ -0.69
RD3L-201ENST00000557640 COL4A1P02462 1669 aa10.71□□□□□ -0.69
RD3L-201ENST00000557640 OATP04181 439 aa10.71□□□□□ -0.69
RD3L-201ENST00000557640 CTCFP49711 727 aaPredicted RBP10.71□□□□□ -0.69
RD3L-201ENST00000557640 ST5P78524 1137 aa10.71□□□□□ -0.69
RD3L-201ENST00000557640 FKBP4Q02790 459 aaKnown RBP eCLIP10.71□□□□□ -0.69
RD3L-201ENST00000557640 CCDC93Q567U6 631 aa10.71□□□□□ -0.69
RD3L-201ENST00000557640 CNKSR1Q969H4 720 aa10.71□□□□□ -0.69
RD3L-201ENST00000557640 SETDB2Q96T68 719 aa10.71□□□□□ -0.69
RD3L-201ENST00000557640 RIC1Q4ADV7 1423 aa10.7□□□□□ -0.7
RD3L-201ENST00000557640 IQCA1LA6NCM1 817 aa10.7□□□□□ -0.7
RD3L-201ENST00000557640 GNAT3A8MTJ3 354 aa10.7□□□□□ -0.7
RD3L-201ENST00000557640 FMNL1O95466 1100 aaPredicted RBP10.7□□□□□ -0.7
RD3L-201ENST00000557640 EPHX2P34913 555 aa10.7□□□□□ -0.7
RD3L-201ENST00000557640 TEFQ10587 303 aa10.7□□□□□ -0.7
RD3L-201ENST00000557640 PXYLP1Q8TE99 480 aa10.7□□□□□ -0.7
RD3L-201ENST00000557640 ABHD8Q96I13 439 aa10.7□□□□□ -0.7
RD3L-201ENST00000557640 FMNL2Q96PY5 1086 aa10.7□□□□□ -0.7
RD3L-201ENST00000557640 SENP2Q9HC62 589 aa10.7□□□□□ -0.7
RD3L-201ENST00000557640 HACL1Q9UJ83 578 aa10.7□□□□□ -0.7
RD3L-201ENST00000557640 LRRC37AA6NMS7 1700 aa10.7□□□□□ -0.7
RD3L-201ENST00000557640 DUOX1Q9NRD9 1551 aa10.69□□□□□ -0.7
RD3L-201ENST00000557640 CLSPNQ9HAW4 1339 aa10.69□□□□□ -0.7
RD3L-201ENST00000557640 FZD9O00144 591 aa10.69□□□□□ -0.7
RD3L-201ENST00000557640 HLFQ16534 295 aa10.69□□□□□ -0.7
RD3L-201ENST00000557640 MORN1Q5T089 497 aa10.69□□□□□ -0.7
RD3L-201ENST00000557640 NBPF5PQ86XG9 351 aaPredicted RBP10.69□□□□□ -0.7
RD3L-201ENST00000557640 FAM160A2Q8N612 972 aaPredicted RBP10.69□□□□□ -0.7
RD3L-201ENST00000557640 RSPH6AQ9H0K4 717 aa10.69□□□□□ -0.7
RD3L-201ENST00000557640 FAM177BA6PVY3 158 aa10.68□□□□□ -0.7
RD3L-201ENST00000557640 U2SURPO15042 1029 aaKnown RBP10.68□□□□□ -0.7
RD3L-201ENST00000557640 NPR1P16066 1061 aa10.68□□□□□ -0.7
RD3L-201ENST00000557640 SMPD1P17405 629 aa10.68□□□□□ -0.7
RD3L-201ENST00000557640 IARSP41252 1262 aaKnown RBP10.68□□□□□ -0.7
RD3L-201ENST00000557640 LCE2CQ5TA81 110 aa10.68□□□□□ -0.7
RD3L-201ENST00000557640 RDH13Q8NBN7 331 aa10.68□□□□□ -0.7
RD3L-201ENST00000557640 GAS2L2Q8NHY3 880 aa10.68□□□□□ -0.7
RD3L-201ENST00000557640 SNIP1Q8TAD8 396 aaKnown RBP10.68□□□□□ -0.7
RD3L-201ENST00000557640 THAP11Q96EK4 314 aa10.68□□□□□ -0.7
RD3L-201ENST00000557640 UBN2Q6ZU65 1347 aa10.67□□□□□ -0.7
RD3L-201ENST00000557640 WDR33Q9C0J8 1336 aaKnown RBP10.67□□□□□ -0.7
RD3L-201ENST00000557640 TRAF5O00463 557 aa10.67□□□□□ -0.7
RD3L-201ENST00000557640 NPHP1O15259 732 aa10.67□□□□□ -0.7
RD3L-201ENST00000557640 PRKAR2BP31323 418 aa10.67□□□□□ -0.7
RD3L-201ENST00000557640 SCNN1DP51172 638 aa10.67□□□□□ -0.7
RD3L-201ENST00000557640 CNGB1Q14028 1251 aaPredicted RBP10.67□□□□□ -0.7
RD3L-201ENST00000557640 SOGA3Q5TF21 947 aa10.67□□□□□ -0.7
RD3L-201ENST00000557640 MCM10Q7L590 875 aa10.67□□□□□ -0.7
RD3L-201ENST00000557640 CNTROBQ8N137 903 aa10.67□□□□□ -0.7
RD3L-201ENST00000557640 AIDAQ96BJ3 306 aa10.67□□□□□ -0.7
RD3L-201ENST00000557640 TRIM47Q96LD4 638 aa10.67□□□□□ -0.7
RD3L-201ENST00000557640 DDX60Q8IY21 1712 aaKnown RBP10.67□□□□□ -0.7
RD3L-201ENST00000557640 NPC1L1Q9UHC9 1359 aa10.66□□□□□ -0.7
RD3L-201ENST00000557640 FAM181BA6NEQ2 426 aa10.66□□□□□ -0.7
RD3L-201ENST00000557640 BTBD11A6QL63 1104 aa10.66□□□□□ -0.7
RD3L-201ENST00000557640 DCTN1Q14203 1278 aa10.66□□□□□ -0.7
RD3L-201ENST00000557640 CRY2Q49AN0 593 aa10.66□□□□□ -0.7
RD3L-201ENST00000557640 NUTM1Q86Y26 1132 aa10.66□□□□□ -0.7
RD3L-201ENST00000557640 SYNE4Q8N205 404 aa10.66□□□□□ -0.7
RD3L-201ENST00000557640 TEX13AQ9BXU3 409 aaPredicted RBP10.66□□□□□ -0.7
RD3L-201ENST00000557640 DDX21Q9NR30 783 aaKnown RBP eCLIP10.66□□□□□ -0.7
RD3L-201ENST00000557640 NIP7Q9Y221 180 aaKnown RBP eCLIP10.66□□□□□ -0.7
RD3L-201ENST00000557640 WNT7AO00755 349 aa10.65□□□□□ -0.7
RD3L-201ENST00000557640 EPS15P42566 896 aa10.65□□□□□ -0.7
RD3L-201ENST00000557640 FUT2Q10981 343 aa10.65□□□□□ -0.7
RD3L-201ENST00000557640 DEFB115Q30KQ5 88 aa10.65□□□□□ -0.7
RD3L-201ENST00000557640 CST9Q5W186 159 aa10.65□□□□□ -0.7
RD3L-201ENST00000557640 CYP4F22Q6NT55 531 aa10.65□□□□□ -0.7
RD3L-201ENST00000557640 CLEC4GQ6UXB4 293 aa10.65□□□□□ -0.7
RD3L-201ENST00000557640 GPC2Q8N158 579 aa10.65□□□□□ -0.7
RD3L-201ENST00000557640 PRDM9Q9NQV7 894 aa10.65□□□□□ -0.7
RD3L-201ENST00000557640 SLC27A5Q9Y2P5 690 aa10.65□□□□□ -0.7
RD3L-201ENST00000557640 POLR2AP24928 1970 aaKnown RBP10.65□□□□□ -0.71
RD3L-201ENST00000557640 AOC2O75106 756 aa10.64□□□□□ -0.71
RD3L-201ENST00000557640 CAPNS2Q96L46 248 aa10.64□□□□□ -0.71
RD3L-201ENST00000557640 PSMD1Q99460 953 aa10.64□□□□□ -0.71
RD3L-201ENST00000557640 ABT1Q9ULW3 272 aaKnown RBP10.64□□□□□ -0.71
RD3L-201ENST00000557640 PDE4DIPQ5VU43 2346 aa10.64□□□□□ -0.71
RD3L-201ENST00000557640 SCN9AQ15858 1988 aa10.63□□□□□ -0.71
RD3L-201ENST00000557640 J3QL48 77 aa10.63□□□□□ -0.71
RD3L-201ENST00000557640 TTLL7Q6ZT98 887 aa10.63□□□□□ -0.71
RD3L-201ENST00000557640 GJA3Q9Y6H8 435 aa10.63□□□□□ -0.71
RD3L-201ENST00000557640 IBTKQ9P2D0 1353 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms