RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 LDLRAD1Q5T700 205 aa15.8■□□□□ 0.12
RTN1-208ENST00000557422 ARMC9Q7Z3E5 817 aa15.8■□□□□ 0.12
RTN1-208ENST00000557422 PHAXQ9H814 394 aaKnown RBP15.8■□□□□ 0.12
RTN1-208ENST00000557422 MED23Q9ULK4 1368 aa15.79■□□□□ 0.12
RTN1-208ENST00000557422 SASH1O94885 1247 aa15.79■□□□□ 0.12
RTN1-208ENST00000557422 PRKG1Q13976 671 aa15.79■□□□□ 0.12
RTN1-208ENST00000557422 SPRYD7Q5W111 196 aa15.79■□□□□ 0.12
RTN1-208ENST00000557422 CWC25Q9NXE8 425 aaPredicted RBP15.79■□□□□ 0.12
RTN1-208ENST00000557422 POTEFA5A3E0 1075 aa15.78■□□□□ 0.12
RTN1-208ENST00000557422 STRIP1Q5VSL9 837 aa15.78■□□□□ 0.12
RTN1-208ENST00000557422 RUNDC1Q96C34 613 aa15.78■□□□□ 0.12
RTN1-208ENST00000557422 MINPP1Q9UNW1 487 aa15.78■□□□□ 0.12
RTN1-208ENST00000557422 ZNF646O15015 1829 aaPredicted RBP15.78■□□□□ 0.12
RTN1-208ENST00000557422 MYO3BQ8WXR4 1341 aa15.77■□□□□ 0.12
RTN1-208ENST00000557422 ALDH1A1P00352 501 aa15.77■□□□□ 0.12
RTN1-208ENST00000557422 MMP14P50281 582 aa15.77■□□□□ 0.12
RTN1-208ENST00000557422 INTS3Q68E01 1043 aaKnown RBP15.77■□□□□ 0.12
RTN1-208ENST00000557422 OTOP1Q7RTM1 612 aa15.77■□□□□ 0.12
RTN1-208ENST00000557422 APOBEC3FQ8IUX4 373 aaKnown RBP15.77■□□□□ 0.12
RTN1-208ENST00000557422 FBXW7Q969H0 707 aa15.77■□□□□ 0.12
RTN1-208ENST00000557422 CDC5LQ99459 802 aaKnown RBP15.77■□□□□ 0.12
RTN1-208ENST00000557422 MBIPQ9NS73 344 aa15.77■□□□□ 0.12
RTN1-208ENST00000557422 BSDC1Q9NW68 430 aaPredicted RBP15.77■□□□□ 0.12
RTN1-208ENST00000557422 TRIM17Q9Y577 477 aa15.77■□□□□ 0.12
RTN1-208ENST00000557422 CCT4P50991 539 aaKnown RBP15.76■□□□□ 0.11
RTN1-208ENST00000557422 CTSWP56202 376 aa15.76■□□□□ 0.11
RTN1-208ENST00000557422 INHBEP58166 350 aa15.76■□□□□ 0.11
RTN1-208ENST00000557422 RALBP1Q15311 655 aa15.76■□□□□ 0.11
RTN1-208ENST00000557422 METTL22Q9BUU2 404 aaPredicted RBP15.76■□□□□ 0.11
RTN1-208ENST00000557422 COA1Q9GZY4 146 aa15.76■□□□□ 0.11
RTN1-208ENST00000557422 ANGEL1Q9UNK9 670 aaKnown RBP15.76■□□□□ 0.11
RTN1-208ENST00000557422 KIAA0100Q14667 2235 aaKnown RBP15.76■□□□□ 0.11
RTN1-208ENST00000557422 MANSC4A6NHS7 340 aaPredicted RBP15.75■□□□□ 0.11
RTN1-208ENST00000557422 TXNRD3Q86VQ6 643 aa15.75■□□□□ 0.11
RTN1-208ENST00000557422 IFNL1Q8IU54 200 aa15.75■□□□□ 0.11
RTN1-208ENST00000557422 TTLL11Q8NHH1 800 aa15.75■□□□□ 0.11
RTN1-208ENST00000557422 SLC10A4Q96EP9 437 aa15.75■□□□□ 0.11
RTN1-208ENST00000557422 ZBED3Q96IU2 234 aaPredicted RBP15.75■□□□□ 0.11
RTN1-208ENST00000557422 FZD1Q9UP38 647 aa15.75■□□□□ 0.11
RTN1-208ENST00000557422 HTTP42858 3142 aa15.74■□□□□ 0.11
RTN1-208ENST00000557422 ELL2O00472 640 aaPredicted RBP15.74■□□□□ 0.11
RTN1-208ENST00000557422 ZNF853P0CG23 659 aa15.74■□□□□ 0.11
RTN1-208ENST00000557422 TTLL5Q6EMB2 1281 aa15.74■□□□□ 0.11
RTN1-208ENST00000557422 KIAA0825Q8IV33 1275 aa15.74■□□□□ 0.11
RTN1-208ENST00000557422 GREM2Q9H772 168 aa15.74■□□□□ 0.11
RTN1-208ENST00000557422 MKI67P46013 3256 aaKnown RBP15.74■□□□□ 0.11
RTN1-208ENST00000557422 CLMNQ96JQ2 1002 aa15.73■□□□□ 0.11
RTN1-208ENST00000557422 DEFB129Q9H1M3 183 aa15.73■□□□□ 0.11
RTN1-208ENST00000557422 LEMD3Q9Y2U8 911 aa15.73■□□□□ 0.11
RTN1-208ENST00000557422 IGF2BP3O00425 579 aaKnown RBP eCLIP15.72■□□□□ 0.11
RTN1-208ENST00000557422 DDX58O95786 925 aaKnown RBP15.72■□□□□ 0.11
RTN1-208ENST00000557422 ZBTB48P10074 688 aaPredicted RBP15.72■□□□□ 0.11
RTN1-208ENST00000557422 MAP3K11Q16584 847 aa15.72■□□□□ 0.11
RTN1-208ENST00000557422 WNK4Q96J92 1243 aa15.72■□□□□ 0.11
RTN1-208ENST00000557422 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.72■□□□□ 0.11
RTN1-208ENST00000557422 PTPN22Q9Y2R2 807 aa15.72■□□□□ 0.11
RTN1-208ENST00000557422 MAP3K2Q9Y2U5 619 aa15.72■□□□□ 0.11
RTN1-208ENST00000557422 SPEF2Q9C093 1822 aa15.72■□□□□ 0.11
RTN1-208ENST00000557422 IGKV5-2P06315 115 aa15.71■□□□□ 0.11
RTN1-208ENST00000557422 KLRK1P26718 216 aa15.71■□□□□ 0.11
RTN1-208ENST00000557422 GTF2IP78347 998 aa15.71■□□□□ 0.11
RTN1-208ENST00000557422 ARMC5Q96C12 935 aa15.71■□□□□ 0.11
RTN1-208ENST00000557422 ERO1AQ96HE7 468 aa15.71■□□□□ 0.11
RTN1-208ENST00000557422 ADAMTS8Q9UP79 889 aa15.71■□□□□ 0.11
RTN1-208ENST00000557422 EN2P19622 333 aaPredicted RBP15.7■□□□□ 0.1
RTN1-208ENST00000557422 WDR43Q15061 677 aaKnown RBP eCLIP15.7■□□□□ 0.1
RTN1-208ENST00000557422 DLGAP5Q15398 846 aa15.7■□□□□ 0.1
RTN1-208ENST00000557422 C8orf58Q8NAV2 365 aa15.7■□□□□ 0.1
RTN1-208ENST00000557422 CD99L2Q8TCZ2 262 aa15.7■□□□□ 0.1
RTN1-208ENST00000557422 IFT57Q9NWB7 429 aa15.7■□□□□ 0.1
RTN1-208ENST00000557422 COL1A1P02452 1464 aaPredicted RBP15.7■□□□□ 0.1
RTN1-208ENST00000557422 RBBP6Q7Z6E9 1792 aaKnown RBP15.7■□□□□ 0.1
RTN1-208ENST00000557422 ZNF804BA4D1E1 1349 aa15.69■□□□□ 0.1
RTN1-208ENST00000557422 MYH3P11055 1940 aa15.69■□□□□ 0.1
RTN1-208ENST00000557422 PPP1R12BO60237 982 aaPredicted RBP15.69■□□□□ 0.1
RTN1-208ENST00000557422 FXR1P51114 621 aaKnown RBP eCLIP15.69■□□□□ 0.1
RTN1-208ENST00000557422 CRHR2Q13324 411 aa15.69■□□□□ 0.1
RTN1-208ENST00000557422 MTMR14Q8NCE2 650 aa15.69■□□□□ 0.1
RTN1-208ENST00000557422 EFCC1Q9HA90 598 aa15.69■□□□□ 0.1
RTN1-208ENST00000557422 SSC5DA1L4H1 1573 aa15.69■□□□□ 0.1
RTN1-208ENST00000557422 MYBBP1AQ9BQG0 1328 aaKnown RBP15.68■□□□□ 0.1
RTN1-208ENST00000557422 LAMB1P07942 1786 aa15.68■□□□□ 0.1
RTN1-208ENST00000557422 PI4KAP2A4QPH2 592 aa15.68■□□□□ 0.1
RTN1-208ENST00000557422 UNCXA6NJT0 531 aa15.68■□□□□ 0.1
RTN1-208ENST00000557422 GJA5P36382 358 aa15.68■□□□□ 0.1
RTN1-208ENST00000557422 IGHMBP2P38935 993 aaKnown RBP15.68■□□□□ 0.1
RTN1-208ENST00000557422 GNAI1P63096 354 aa15.68■□□□□ 0.1
RTN1-208ENST00000557422 CAP1Q01518 475 aa15.68■□□□□ 0.1
RTN1-208ENST00000557422 CCDC30Q5VVM6 783 aa15.68■□□□□ 0.1
RTN1-208ENST00000557422 KSR2Q6VAB6 950 aa15.68■□□□□ 0.1
RTN1-208ENST00000557422 CERS5Q8N5B7 392 aa15.68■□□□□ 0.1
RTN1-208ENST00000557422 PI4KAP1Q8N8J0 262 aa15.68■□□□□ 0.1
RTN1-208ENST00000557422 ANKRD2Q9GZV1 360 aa15.68■□□□□ 0.1
RTN1-208ENST00000557422 PCDHAC2Q9Y5I4 1007 aa15.68■□□□□ 0.1
RTN1-208ENST00000557422 PPP2R3BQ9Y5P8 575 aa15.68■□□□□ 0.1
RTN1-208ENST00000557422 CENPFP49454 3210 aa15.68■□□□□ 0.1
RTN1-208ENST00000557422 SP3Q02447 781 aa15.67■□□□□ 0.1
RTN1-208ENST00000557422 CWF19L2Q2TBE0 894 aaKnown RBP15.67■□□□□ 0.1
RTN1-208ENST00000557422 SUPT20HL1Q3ZLR7 823 aa15.67■□□□□ 0.1
RTN1-208ENST00000557422 OTUD7BQ6GQQ9 843 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms