RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 TTF1Q15361 905 aaPredicted RBP10.59□□□□□ -0.71
PPP4R3A-212ENST00000557382 ATP2B3Q16720 1220 aa10.59□□□□□ -0.71
PPP4R3A-212ENST00000557382 CCDC129Q6ZRS4 1044 aa10.59□□□□□ -0.71
PPP4R3A-212ENST00000557382 Q6ZUG5 572 aa10.59□□□□□ -0.71
PPP4R3A-212ENST00000557382 NECAB1Q8N987 351 aa10.59□□□□□ -0.71
PPP4R3A-212ENST00000557382 RGS22Q8NE09 1264 aa10.59□□□□□ -0.71
PPP4R3A-212ENST00000557382 FAM89AQ96GI7 184 aa10.59□□□□□ -0.71
PPP4R3A-212ENST00000557382 SLC4A9Q96Q91 983 aa10.59□□□□□ -0.71
PPP4R3A-212ENST00000557382 SEC62Q99442 399 aaKnown RBP10.59□□□□□ -0.71
PPP4R3A-212ENST00000557382 LARP6Q9BRS8 491 aaKnown RBP10.59□□□□□ -0.71
PPP4R3A-212ENST00000557382 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.59□□□□□ -0.71
PPP4R3A-212ENST00000557382 SCAND2PQ9GZW5 306 aaPredicted RBP10.59□□□□□ -0.71
PPP4R3A-212ENST00000557382 RTN4Q9NQC3 1192 aaKnown RBP10.59□□□□□ -0.71
PPP4R3A-212ENST00000557382 SPATA31A1Q5TZJ5 1347 aa10.58□□□□□ -0.71
PPP4R3A-212ENST00000557382 WDR19Q8NEZ3 1342 aa10.58□□□□□ -0.71
PPP4R3A-212ENST00000557382 IRS4O14654 1257 aaPredicted RBP10.58□□□□□ -0.72
PPP4R3A-212ENST00000557382 RGL2O15211 777 aa10.58□□□□□ -0.72
PPP4R3A-212ENST00000557382 GADD45BO75293 160 aaPredicted RBP10.58□□□□□ -0.72
PPP4R3A-212ENST00000557382 UQCRFS1P1P0C7P4 283 aa10.58□□□□□ -0.72
PPP4R3A-212ENST00000557382 ITGA6P23229 1130 aa10.58□□□□□ -0.72
PPP4R3A-212ENST00000557382 EIF5P55010 431 aaKnown RBP10.58□□□□□ -0.72
PPP4R3A-212ENST00000557382 EVCP57679 992 aa10.58□□□□□ -0.72
PPP4R3A-212ENST00000557382 HLFQ16534 295 aa10.58□□□□□ -0.72
PPP4R3A-212ENST00000557382 DZIP3Q86Y13 1208 aaKnown RBP10.58□□□□□ -0.72
PPP4R3A-212ENST00000557382 SMARCC2Q8TAQ2 1214 aa10.58□□□□□ -0.72
PPP4R3A-212ENST00000557382 APPBP2Q92624 585 aa10.58□□□□□ -0.72
PPP4R3A-212ENST00000557382 ZNF274Q96GC6 653 aaPredicted RBP10.58□□□□□ -0.72
PPP4R3A-212ENST00000557382 CHAMP1Q96JM3 812 aa10.58□□□□□ -0.72
PPP4R3A-212ENST00000557382 ZSCAN16Q9H4T2 348 aaPredicted RBP10.58□□□□□ -0.72
PPP4R3A-212ENST00000557382 RRAGDQ9NQL2 400 aaPredicted RBP10.58□□□□□ -0.72
PPP4R3A-212ENST00000557382 TAF6LQ9Y6J9 622 aa10.58□□□□□ -0.72
PPP4R3A-212ENST00000557382 NDUFB9Q9Y6M9 179 aa10.58□□□□□ -0.72
PPP4R3A-212ENST00000557382 LTBP4Q8N2S1 1624 aa10.58□□□□□ -0.72
PPP4R3A-212ENST00000557382 ATRNO75882 1429 aa10.58□□□□□ -0.72
PPP4R3A-212ENST00000557382 MROH5Q6ZUA9 1318 aa10.58□□□□□ -0.72
PPP4R3A-212ENST00000557382 RTL9Q8NET4 1388 aa10.57□□□□□ -0.72
PPP4R3A-212ENST00000557382 VPS37CA5D8V6 355 aaPredicted RBP10.57□□□□□ -0.72
PPP4R3A-212ENST00000557382 E7EWF7 191 aa10.57□□□□□ -0.72
PPP4R3A-212ENST00000557382 DNM1Q05193 864 aaKnown RBP10.57□□□□□ -0.72
PPP4R3A-212ENST00000557382 PARP10Q53GL7 1025 aa10.57□□□□□ -0.72
PPP4R3A-212ENST00000557382 METTL24Q5JXM2 366 aa10.57□□□□□ -0.72
PPP4R3A-212ENST00000557382 ATL3Q6DD88 541 aa10.57□□□□□ -0.72
PPP4R3A-212ENST00000557382 LDHAL6AQ6ZMR3 332 aa10.57□□□□□ -0.72
PPP4R3A-212ENST00000557382 BARGINQ6ZT62 677 aa10.57□□□□□ -0.72
PPP4R3A-212ENST00000557382 STOX1Q6ZVD7 989 aa10.57□□□□□ -0.72
PPP4R3A-212ENST00000557382 VGLL2Q8N8G2 317 aa10.57□□□□□ -0.72
PPP4R3A-212ENST00000557382 TRMT112Q9UI30 125 aaKnown RBP10.57□□□□□ -0.72
PPP4R3A-212ENST00000557382 ZBTB1Q9Y2K1 713 aa10.57□□□□□ -0.72
PPP4R3A-212ENST00000557382 ZNF330Q9Y3S2 320 aaPredicted RBP10.57□□□□□ -0.72
PPP4R3A-212ENST00000557382 DDX60Q8IY21 1712 aaKnown RBP10.57□□□□□ -0.72
PPP4R3A-212ENST00000557382 PDE8BO95263 885 aa10.56□□□□□ -0.72
PPP4R3A-212ENST00000557382 ARID4AP29374 1257 aaPredicted RBP10.56□□□□□ -0.72
PPP4R3A-212ENST00000557382 ADORA1P30542 326 aa10.56□□□□□ -0.72
PPP4R3A-212ENST00000557382 FKBP4Q02790 459 aaKnown RBP eCLIP10.56□□□□□ -0.72
PPP4R3A-212ENST00000557382 UBE3CQ15386 1083 aa10.56□□□□□ -0.72
PPP4R3A-212ENST00000557382 DDB1Q16531 1140 aa10.56□□□□□ -0.72
PPP4R3A-212ENST00000557382 IMMTQ16891 758 aaKnown RBP10.56□□□□□ -0.72
PPP4R3A-212ENST00000557382 NAA16Q6N069 864 aaPredicted RBP10.56□□□□□ -0.72
PPP4R3A-212ENST00000557382 SMARCC1Q92922 1105 aaPredicted RBP10.56□□□□□ -0.72
PPP4R3A-212ENST00000557382 OSBP2Q969R2 916 aa10.56□□□□□ -0.72
PPP4R3A-212ENST00000557382 AKT1S1Q96B36 256 aa10.56□□□□□ -0.72
PPP4R3A-212ENST00000557382 GREM2Q9H772 168 aa10.56□□□□□ -0.72
PPP4R3A-212ENST00000557382 GDPD2Q9HCC8 539 aa10.56□□□□□ -0.72
PPP4R3A-212ENST00000557382 CCDC87Q9NVE4 849 aa10.56□□□□□ -0.72
PPP4R3A-212ENST00000557382 ATF5Q9Y2D1 282 aaPredicted RBP10.56□□□□□ -0.72
PPP4R3A-212ENST00000557382 DOCK2Q92608 1830 aa10.56□□□□□ -0.72
PPP4R3A-212ENST00000557382 BCORQ6W2J9 1755 aa10.55□□□□□ -0.72
PPP4R3A-212ENST00000557382 M0R2C6 588 aa10.55□□□□□ -0.72
PPP4R3A-212ENST00000557382 FIBPO43427 364 aa10.55□□□□□ -0.72
PPP4R3A-212ENST00000557382 MCM5P33992 734 aa10.55□□□□□ -0.72
PPP4R3A-212ENST00000557382 FGD1P98174 961 aa10.55□□□□□ -0.72
PPP4R3A-212ENST00000557382 CDC37L1Q7L3B6 337 aa10.55□□□□□ -0.72
PPP4R3A-212ENST00000557382 ZSCAN30Q86W11 494 aa10.55□□□□□ -0.72
PPP4R3A-212ENST00000557382 BRF1Q92994 677 aa10.55□□□□□ -0.72
PPP4R3A-212ENST00000557382 TCEANC2Q96MN5 208 aa10.55□□□□□ -0.72
PPP4R3A-212ENST00000557382 CNNM1Q9NRU3 951 aa10.55□□□□□ -0.72
PPP4R3A-212ENST00000557382 COL5A3P25940 1745 aaPredicted RBP10.55□□□□□ -0.72
PPP4R3A-212ENST00000557382 SPATA31A5Q5VU36 1347 aa10.55□□□□□ -0.72
PPP4R3A-212ENST00000557382 SPATA31A7Q8IWB4 1347 aa10.55□□□□□ -0.72
PPP4R3A-212ENST00000557382 SLIT2O94813 1529 aa10.54□□□□□ -0.72
PPP4R3A-212ENST00000557382 FGFR2P21802 821 aa10.54□□□□□ -0.72
PPP4R3A-212ENST00000557382 GPTP24298 496 aa10.54□□□□□ -0.72
PPP4R3A-212ENST00000557382 ADD2P35612 726 aa10.54□□□□□ -0.72
PPP4R3A-212ENST00000557382 ZAP70P43403 619 aa10.54□□□□□ -0.72
PPP4R3A-212ENST00000557382 SCRN1Q12765 414 aa10.54□□□□□ -0.72
PPP4R3A-212ENST00000557382 RESTQ13127 1097 aa10.54□□□□□ -0.72
PPP4R3A-212ENST00000557382 COL9A3Q14050 684 aaPredicted RBP10.54□□□□□ -0.72
PPP4R3A-212ENST00000557382 PUM3Q15397 648 aaKnown RBP10.54□□□□□ -0.72
PPP4R3A-212ENST00000557382 ALX1Q15699 326 aa10.54□□□□□ -0.72
PPP4R3A-212ENST00000557382 FOXD4L6Q3SYB3 417 aaPredicted RBP10.54□□□□□ -0.72
PPP4R3A-212ENST00000557382 INTS5Q6P9B9 1019 aaKnown RBP10.54□□□□□ -0.72
PPP4R3A-212ENST00000557382 FOXD4L3Q6VB84 417 aaPredicted RBP10.54□□□□□ -0.72
PPP4R3A-212ENST00000557382 NSUN7Q8NE18 718 aaKnown RBP10.54□□□□□ -0.72
PPP4R3A-212ENST00000557382 LPIN2Q92539 896 aa10.54□□□□□ -0.72
PPP4R3A-212ENST00000557382 UTP14AQ9BVJ6 771 aaKnown RBP10.54□□□□□ -0.72
PPP4R3A-212ENST00000557382 CFAP45Q9UL16 551 aa10.54□□□□□ -0.72
PPP4R3A-212ENST00000557382 CCDC9Q9Y3X0 531 aaKnown RBP10.54□□□□□ -0.72
PPP4R3A-212ENST00000557382 ZMYM6O95789 1325 aa10.54□□□□□ -0.72
PPP4R3A-212ENST00000557382 UBN2Q6ZU65 1347 aa10.54□□□□□ -0.72
PPP4R3A-212ENST00000557382 MYH14Q7Z406 1995 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms