RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 RSPO4Q2I0M5 234 aaPredicted RBP6.81□□□□□ -1.32
CHD8-212ENST00000557329 NKAPLQ5M9Q1 402 aa6.81□□□□□ -1.32
CHD8-212ENST00000557329 TRAPPC3LQ5T215 181 aa6.81□□□□□ -1.32
CHD8-212ENST00000557329 MSL1Q68DK7 614 aa6.81□□□□□ -1.32
CHD8-212ENST00000557329 WFDC8Q8IUA0 241 aa6.81□□□□□ -1.32
CHD8-212ENST00000557329 RBCK1Q9BYM8 510 aa6.81□□□□□ -1.32
CHD8-212ENST00000557329 SMG9Q9H0W8 520 aaKnown RBP6.81□□□□□ -1.32
CHD8-212ENST00000557329 ANO2Q9NQ90 1003 aa6.81□□□□□ -1.32
CHD8-212ENST00000557329 TNFRSF21O75509 655 aa6.8□□□□□ -1.32
CHD8-212ENST00000557329 AFF1P51825 1210 aaKnown RBP6.8□□□□□ -1.32
CHD8-212ENST00000557329 ARHGAP4P98171 946 aa6.8□□□□□ -1.32
CHD8-212ENST00000557329 NUDT8Q8WV74 236 aa6.8□□□□□ -1.32
CHD8-212ENST00000557329 DNAJC25Q9H1X3 360 aa6.8□□□□□ -1.32
CHD8-212ENST00000557329 GGNBP2Q9H3C7 697 aa6.8□□□□□ -1.32
CHD8-212ENST00000557329 TMEM63CQ9P1W3 806 aa6.8□□□□□ -1.32
CHD8-212ENST00000557329 DCTN4Q9UJW0 460 aa6.8□□□□□ -1.32
CHD8-212ENST00000557329 ELNP15502 786 aa6.79□□□□□ -1.32
CHD8-212ENST00000557329 NRG1Q02297 640 aaPredicted RBP6.79□□□□□ -1.32
CHD8-212ENST00000557329 KRTAP1-3Q8IUG1 177 aa6.79□□□□□ -1.32
CHD8-212ENST00000557329 ALKBH8Q96BT7 664 aaKnown RBP6.79□□□□□ -1.32
CHD8-212ENST00000557329 NSUN5Q96P11 429 aaKnown RBP6.79□□□□□ -1.32
CHD8-212ENST00000557329 BIN2Q9UBW5 565 aaPredicted RBP6.79□□□□□ -1.32
CHD8-212ENST00000557329 SALL4Q9UJQ4 1053 aa6.79□□□□□ -1.32
CHD8-212ENST00000557329 NAGPAQ9UK23 515 aa6.79□□□□□ -1.32
CHD8-212ENST00000557329 AMOTL2Q9Y2J4 779 aa6.79□□□□□ -1.32
CHD8-212ENST00000557329 ARHGEF11O15085 1522 aa6.79□□□□□ -1.32
CHD8-212ENST00000557329 CADPSQ9ULU8 1353 aa6.79□□□□□ -1.32
CHD8-212ENST00000557329 SMARCA4P51532 1647 aa6.79□□□□□ -1.32
CHD8-212ENST00000557329 C9orf172C9J069 976 aa6.78□□□□□ -1.32
CHD8-212ENST00000557329 FGD1P98174 961 aa6.78□□□□□ -1.32
CHD8-212ENST00000557329 MLLT1Q03111 559 aaPredicted RBP6.78□□□□□ -1.32
CHD8-212ENST00000557329 FOXD4L6Q3SYB3 417 aaPredicted RBP6.78□□□□□ -1.32
CHD8-212ENST00000557329 FAM117BQ6P1L5 589 aa6.78□□□□□ -1.32
CHD8-212ENST00000557329 FOXD4L3Q6VB84 417 aaPredicted RBP6.78□□□□□ -1.32
CHD8-212ENST00000557329 ZSCAN29Q8IWY8 852 aaPredicted RBP6.78□□□□□ -1.32
CHD8-212ENST00000557329 CEP120Q8N960 986 aa6.78□□□□□ -1.32
CHD8-212ENST00000557329 TMC1Q8TDI8 760 aa6.78□□□□□ -1.32
CHD8-212ENST00000557329 FAM129BQ96TA1 746 aa6.78□□□□□ -1.32
CHD8-212ENST00000557329 PBX4Q9BYU1 374 aa6.78□□□□□ -1.32
CHD8-212ENST00000557329 CCDC87Q9NVE4 849 aa6.78□□□□□ -1.32
CHD8-212ENST00000557329 PTPRAP18433 802 aa6.77□□□□□ -1.33
CHD8-212ENST00000557329 CABP4P57796 275 aa6.77□□□□□ -1.33
CHD8-212ENST00000557329 COL9A3Q14050 684 aaPredicted RBP6.77□□□□□ -1.33
CHD8-212ENST00000557329 ECM1Q16610 540 aa6.77□□□□□ -1.33
CHD8-212ENST00000557329 HFE2Q6ZVN8 426 aa6.77□□□□□ -1.33
CHD8-212ENST00000557329 WNT8BQ93098 351 aa6.77□□□□□ -1.33
CHD8-212ENST00000557329 ZFYVE28Q9HCC9 887 aa6.77□□□□□ -1.33
CHD8-212ENST00000557329 IVNS1ABPQ9Y6Y0 642 aa6.77□□□□□ -1.33
CHD8-212ENST00000557329 CEP164Q9UPV0 1460 aa6.77□□□□□ -1.33
CHD8-212ENST00000557329 WDR62O43379 1518 aa6.76□□□□□ -1.33
CHD8-212ENST00000557329 A0A0A0MRY4 1105 aa6.76□□□□□ -1.33
CHD8-212ENST00000557329 SCO2A0A1W2PP80 73 aa6.76□□□□□ -1.33
CHD8-212ENST00000557329 J3QW42 95 aa6.76□□□□□ -1.33
CHD8-212ENST00000557329 GRIK5Q16478 980 aa6.76□□□□□ -1.33
CHD8-212ENST00000557329 ARTNQ5T4W7 220 aa6.76□□□□□ -1.33
CHD8-212ENST00000557329 C1orf127Q8N9H9 656 aa6.76□□□□□ -1.33
CHD8-212ENST00000557329 TPSG1Q9NRR2 321 aa6.76□□□□□ -1.33
CHD8-212ENST00000557329 PPME1Q9Y570 386 aa6.76□□□□□ -1.33
CHD8-212ENST00000557329 DYRK3O43781 588 aa6.75□□□□□ -1.33
CHD8-212ENST00000557329 CPNE3O75131 537 aaKnown RBP6.75□□□□□ -1.33
CHD8-212ENST00000557329 CDC27P30260 824 aa6.75□□□□□ -1.33
CHD8-212ENST00000557329 CEP135Q66GS9 1140 aa6.75□□□□□ -1.33
CHD8-212ENST00000557329 ILDR2Q71H61 639 aa6.75□□□□□ -1.33
CHD8-212ENST00000557329 FBXO11Q86XK2 927 aa6.75□□□□□ -1.33
CHD8-212ENST00000557329 TMEM102Q8N9M5 508 aaPredicted RBP6.75□□□□□ -1.33
CHD8-212ENST00000557329 ZFYVE1Q9HBF4 777 aa6.75□□□□□ -1.33
CHD8-212ENST00000557329 ZFP64Q9NPA5 681 aa6.75□□□□□ -1.33
CHD8-212ENST00000557329 CNTN3Q9P232 1028 aa6.75□□□□□ -1.33
CHD8-212ENST00000557329 IGF2-ASQ6U949 168 aa6.74□□□□□ -1.33
CHD8-212ENST00000557329 FMR1NBQ8N0W7 255 aaPredicted RBP6.74□□□□□ -1.33
CHD8-212ENST00000557329 IL22RA1Q8N6P7 574 aa6.74□□□□□ -1.33
CHD8-212ENST00000557329 KRTAP4-12Q9BQ66 201 aa6.74□□□□□ -1.33
CHD8-212ENST00000557329 ADAM19Q9H013 955 aa6.74□□□□□ -1.33
CHD8-212ENST00000557329 CHRDQ9H2X0 955 aa6.74□□□□□ -1.33
CHD8-212ENST00000557329 PPP4R2Q9NY27 417 aa6.74□□□□□ -1.33
CHD8-212ENST00000557329 PDE2AO00408 941 aaPredicted RBP6.73□□□□□ -1.33
CHD8-212ENST00000557329 MAPK1P28482 360 aa6.73□□□□□ -1.33
CHD8-212ENST00000557329 ARL4DP49703 201 aa6.73□□□□□ -1.33
CHD8-212ENST00000557329 GDF6Q6KF10 455 aaPredicted RBP6.73□□□□□ -1.33
CHD8-212ENST00000557329 C8orf86Q6ZUL3 223 aa6.73□□□□□ -1.33
CHD8-212ENST00000557329 GALNT12Q8IXK2 581 aa6.73□□□□□ -1.33
CHD8-212ENST00000557329 DMRTC2Q8IXT2 367 aaPredicted RBP6.73□□□□□ -1.33
CHD8-212ENST00000557329 KLHL23Q8NBE8 558 aa6.73□□□□□ -1.33
CHD8-212ENST00000557329 LENG1Q96BZ8 264 aaPredicted RBP6.73□□□□□ -1.33
CHD8-212ENST00000557329 DZANK1Q9NVP4 752 aa6.73□□□□□ -1.33
CHD8-212ENST00000557329 FANCD2Q9BXW9 1451 aa6.73□□□□□ -1.33
CHD8-212ENST00000557329 CYP2E1P05181 493 aaPredicted RBP6.72□□□□□ -1.33
CHD8-212ENST00000557329 LCE3BQ5TA77 95 aa6.72□□□□□ -1.33
CHD8-212ENST00000557329 OSMRQ99650 979 aa6.72□□□□□ -1.33
CHD8-212ENST00000557329 RASSF4Q9H2L5 321 aa6.72□□□□□ -1.33
CHD8-212ENST00000557329 OSGEPQ9NPF4 335 aa6.72□□□□□ -1.33
CHD8-212ENST00000557329 KANSL3Q9P2N6 904 aa6.72□□□□□ -1.33
CHD8-212ENST00000557329 TRAK1Q9UPV9 953 aa6.72□□□□□ -1.33
CHD8-212ENST00000557329 A6NHS1 94 aa6.71□□□□□ -1.34
CHD8-212ENST00000557329 EREGO14944 169 aa6.71□□□□□ -1.34
CHD8-212ENST00000557329 ERCC3P19447 782 aa6.71□□□□□ -1.34
CHD8-212ENST00000557329 PIP4K2BP78356 416 aa6.71□□□□□ -1.34
CHD8-212ENST00000557329 PLCB3Q01970 1234 aa6.71□□□□□ -1.34
CHD8-212ENST00000557329 COL19A1Q14993 1142 aa6.71□□□□□ -1.34
CHD8-212ENST00000557329 COL13A1Q5TAT6 717 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms