RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 TRPM7Q96QT4 1865 aa20.86■□□□□ 0.93
VSX1-207ENST00000557285 USP17L3A6NCW0 530 aa20.85■□□□□ 0.93
VSX1-207ENST00000557285 USP17L4A6NCW7 530 aa20.85■□□□□ 0.93
VSX1-207ENST00000557285 USP17L1Q7RTZ2 530 aa20.85■□□□□ 0.93
VSX1-207ENST00000557285 JMYQ8N9B5 988 aa20.85■□□□□ 0.93
VSX1-207ENST00000557285 CT47B1P0C2W7 299 aaPredicted RBP20.84■□□□□ 0.93
VSX1-207ENST00000557285 KIF4BQ2VIQ3 1234 aa20.84■□□□□ 0.93
VSX1-207ENST00000557285 PODNQ7Z5L7 613 aa20.84■□□□□ 0.93
VSX1-207ENST00000557285 CNTNAP1P78357 1384 aa20.84■□□□□ 0.93
VSX1-207ENST00000557285 UTYO14607 1347 aa20.83■□□□□ 0.93
VSX1-207ENST00000557285 PAXIP1Q6ZW49 1069 aaPredicted RBP20.83■□□□□ 0.93
VSX1-207ENST00000557285 COA1Q9GZY4 146 aa20.83■□□□□ 0.93
VSX1-207ENST00000557285 POLR2AP24928 1970 aaKnown RBP20.83■□□□□ 0.92
VSX1-207ENST00000557285 RARSP54136 660 aaKnown RBP20.82■□□□□ 0.92
VSX1-207ENST00000557285 DLK2Q6UY11 383 aa20.82■□□□□ 0.92
VSX1-207ENST00000557285 USP48Q86UV5 1035 aa20.82■□□□□ 0.92
VSX1-207ENST00000557285 USP44Q9H0E7 712 aa20.82■□□□□ 0.92
VSX1-207ENST00000557285 CELF2O95319 508 aaKnown RBP20.81■□□□□ 0.92
VSX1-207ENST00000557285 GRM1Q13255 1194 aa20.81■□□□□ 0.92
VSX1-207ENST00000557285 CST9Q5W186 159 aa20.81■□□□□ 0.92
VSX1-207ENST00000557285 ANKRD44Q8N8A2 993 aa20.81■□□□□ 0.92
VSX1-207ENST00000557285 AGBL3Q8NEM8 1001 aa20.81■□□□□ 0.92
VSX1-207ENST00000557285 ZC3H15Q8WU90 426 aaKnown RBP20.81■□□□□ 0.92
VSX1-207ENST00000557285 PUS3Q9BZE2 481 aaKnown RBP20.81■□□□□ 0.92
VSX1-207ENST00000557285 ASTN2O75129 1339 aaPredicted RBP20.8■□□□□ 0.92
VSX1-207ENST00000557285 USP17L8P0C7I0 530 aa20.8■□□□□ 0.92
VSX1-207ENST00000557285 VEGFBP49765 207 aa20.8■□□□□ 0.92
VSX1-207ENST00000557285 CDC37L1Q7L3B6 337 aa20.8■□□□□ 0.92
VSX1-207ENST00000557285 PGAP2Q9UHJ9 254 aa20.8■□□□□ 0.92
VSX1-207ENST00000557285 ZNF646O15015 1829 aaPredicted RBP20.79■□□□□ 0.92
VSX1-207ENST00000557285 ADM5C9JUS6 153 aa20.79■□□□□ 0.92
VSX1-207ENST00000557285 GTF2IP78347 998 aa20.79■□□□□ 0.92
VSX1-207ENST00000557285 DEFB115Q30KQ5 88 aa20.79■□□□□ 0.92
VSX1-207ENST00000557285 DACT2Q5SW24 774 aa20.79■□□□□ 0.92
VSX1-207ENST00000557285 TTLL5Q6EMB2 1281 aa20.79■□□□□ 0.92
VSX1-207ENST00000557285 KRT26Q7Z3Y9 468 aa20.79■□□□□ 0.92
VSX1-207ENST00000557285 KLHDC4Q8TBB5 520 aa20.79■□□□□ 0.92
VSX1-207ENST00000557285 DCPSQ96C86 337 aaKnown RBP20.79■□□□□ 0.92
VSX1-207ENST00000557285 API5Q9BZZ5 524 aaKnown RBP20.79■□□□□ 0.92
VSX1-207ENST00000557285 GGA3Q9NZ52 723 aa20.79■□□□□ 0.92
VSX1-207ENST00000557285 HSPA1AP0DMV8 641 aaKnown RBP20.78■□□□□ 0.92
VSX1-207ENST00000557285 HSPA1BP0DMV9 641 aaKnown RBP20.78■□□□□ 0.92
VSX1-207ENST00000557285 RABL6Q3YEC7 729 aaPredicted RBP20.78■□□□□ 0.92
VSX1-207ENST00000557285 GMLQ99445 158 aa20.78■□□□□ 0.92
VSX1-207ENST00000557285 CD209Q9NNX6 404 aa20.78■□□□□ 0.92
VSX1-207ENST00000557285 MYOZ2Q9NPC6 264 aa20.78■□□□□ 0.92
VSX1-207ENST00000557285 JAG2Q9Y219 1238 aa20.78■□□□□ 0.92
VSX1-207ENST00000557285 ZNF280AP59817 542 aaPredicted RBP20.77■□□□□ 0.92
VSX1-207ENST00000557285 SCARF1Q14162 830 aa20.77■□□□□ 0.92
VSX1-207ENST00000557285 LRRC24Q50LG9 513 aa20.77■□□□□ 0.92
VSX1-207ENST00000557285 STRIP1Q5VSL9 837 aa20.77■□□□□ 0.92
VSX1-207ENST00000557285 ZNF804AQ7Z570 1209 aa20.77■□□□□ 0.92
VSX1-207ENST00000557285 FRAT1Q92837 279 aaPredicted RBP20.77■□□□□ 0.92
VSX1-207ENST00000557285 SCAF8Q9UPN6 1271 aaKnown RBP20.77■□□□□ 0.92
VSX1-207ENST00000557285 KIF16BQ96L93 1317 aa20.77■□□□□ 0.91
VSX1-207ENST00000557285 RASSF10A6NK89 507 aa20.76■□□□□ 0.91
VSX1-207ENST00000557285 UBTFL1P0CB47 393 aaPredicted RBP20.76■□□□□ 0.91
VSX1-207ENST00000557285 KIAA0825Q8IV33 1275 aa20.76■□□□□ 0.91
VSX1-207ENST00000557285 ZNF609O15014 1411 aa20.76■□□□□ 0.91
VSX1-207ENST00000557285 IRS2Q9Y4H2 1338 aa20.76■□□□□ 0.91
VSX1-207ENST00000557285 BCAR3O75815 825 aa20.75■□□□□ 0.91
VSX1-207ENST00000557285 METTL24Q5JXM2 366 aa20.75■□□□□ 0.91
VSX1-207ENST00000557285 ANGEL2Q5VTE6 544 aaKnown RBP20.75■□□□□ 0.91
VSX1-207ENST00000557285 OGFOD1Q8N543 542 aa20.75■□□□□ 0.91
VSX1-207ENST00000557285 CYP4F22Q6NT55 531 aa20.74■□□□□ 0.91
VSX1-207ENST00000557285 SULF1Q8IWU6 871 aa20.74■□□□□ 0.91
VSX1-207ENST00000557285 RIPOR2Q9Y4F9 1068 aa20.74■□□□□ 0.91
VSX1-207ENST00000557285 TLL2Q9Y6L7 1015 aa20.74■□□□□ 0.91
VSX1-207ENST00000557285 MROH5Q6ZUA9 1318 aa20.74■□□□□ 0.91
VSX1-207ENST00000557285 MYO3BQ8WXR4 1341 aa20.74■□□□□ 0.91
VSX1-207ENST00000557285 WDR33Q9C0J8 1336 aaKnown RBP20.74■□□□□ 0.91
VSX1-207ENST00000557285 F8W031 263 aaPredicted RBP20.73■□□□□ 0.91
VSX1-207ENST00000557285 GYG1P46976 350 aa20.73■□□□□ 0.91
VSX1-207ENST00000557285 BRPF1P55201 1214 aaPredicted RBP20.73■□□□□ 0.91
VSX1-207ENST00000557285 C15orf52Q6ZUT6 534 aaKnown RBP20.73■□□□□ 0.91
VSX1-207ENST00000557285 TNNQ9UQP3 1299 aa20.73■□□□□ 0.91
VSX1-207ENST00000557285 SASH1O94885 1247 aa20.72■□□□□ 0.91
VSX1-207ENST00000557285 NBPF9Q3BBW0 867 aa20.72■□□□□ 0.91
VSX1-207ENST00000557285 CAPNS2Q96L46 248 aa20.72■□□□□ 0.91
VSX1-207ENST00000557285 MEIS3Q99687 375 aa20.72■□□□□ 0.91
VSX1-207ENST00000557285 LRRFIP2Q9Y608 721 aaKnown RBP20.72■□□□□ 0.91
VSX1-207ENST00000557285 UBE4AQ14139 1066 aa20.71■□□□□ 0.91
VSX1-207ENST00000557285 SAPCD2Q86UD0 394 aa20.71■□□□□ 0.91
VSX1-207ENST00000557285 CLUAP1Q96AJ1 413 aa20.71■□□□□ 0.91
VSX1-207ENST00000557285 HDAC9Q9UKV0 1011 aa20.71■□□□□ 0.91
VSX1-207ENST00000557285 IPO8O15397 1037 aaKnown RBP20.7■□□□□ 0.9
VSX1-207ENST00000557285 IL1R1P14778 569 aa20.7■□□□□ 0.9
VSX1-207ENST00000557285 VPS37DQ86XT2 251 aa20.7■□□□□ 0.9
VSX1-207ENST00000557285 CERS5Q8N5B7 392 aa20.7■□□□□ 0.9
VSX1-207ENST00000557285 CDCA5Q96FF9 252 aa20.7■□□□□ 0.9
VSX1-207ENST00000557285 SIL1Q9H173 461 aa20.7■□□□□ 0.9
VSX1-207ENST00000557285 IQSEC3Q9UPP2 1182 aaPredicted RBP20.7■□□□□ 0.9
VSX1-207ENST00000557285 TRIM27P14373 513 aa20.69■□□□□ 0.9
VSX1-207ENST00000557285 HIBADHP31937 336 aaKnown RBP20.69■□□□□ 0.9
VSX1-207ENST00000557285 ECE1P42892 770 aa20.69■□□□□ 0.9
VSX1-207ENST00000557285 ARHGAP45Q92619 1136 aa20.69■□□□□ 0.9
VSX1-207ENST00000557285 WNT10BO00744 389 aa20.68■□□□□ 0.9
VSX1-207ENST00000557285 AOC2O75106 756 aa20.68■□□□□ 0.9
VSX1-207ENST00000557285 RFX5P48382 616 aaPredicted RBP20.68■□□□□ 0.9
VSX1-207ENST00000557285 HUNKP57058 714 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms