RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 MCOLN1Q9GZU1 580 aa18.5■□□□□ 0.55
VRTN-202ENST00000557177 SAGE1Q9NXZ1 904 aa18.5■□□□□ 0.55
VRTN-202ENST00000557177 CACNA1FO60840 1977 aa18.5■□□□□ 0.55
VRTN-202ENST00000557177 CCDC85CA6NKD9 419 aa18.49■□□□□ 0.55
VRTN-202ENST00000557177 SLC4A2P04920 1241 aa18.49■□□□□ 0.55
VRTN-202ENST00000557177 CCT4P50991 539 aaKnown RBP18.49■□□□□ 0.55
VRTN-202ENST00000557177 KIF23Q02241 960 aaPredicted RBP18.49■□□□□ 0.55
VRTN-202ENST00000557177 UBE3BQ7Z3V4 1068 aa18.49■□□□□ 0.55
VRTN-202ENST00000557177 PLA2G12BQ9BX93 195 aa18.49■□□□□ 0.55
VRTN-202ENST00000557177 AKAP11Q9UKA4 1901 aa18.49■□□□□ 0.55
VRTN-202ENST00000557177 RGS19P49795 217 aa18.48■□□□□ 0.55
VRTN-202ENST00000557177 CASP7P55210 303 aa18.48■□□□□ 0.55
VRTN-202ENST00000557177 GCKRQ14397 625 aa18.48■□□□□ 0.55
VRTN-202ENST00000557177 DACT2Q5SW24 774 aa18.48■□□□□ 0.55
VRTN-202ENST00000557177 FKBP1BP68106 108 aa18.47■□□□□ 0.55
VRTN-202ENST00000557177 FLIIQ13045 1269 aa18.47■□□□□ 0.55
VRTN-202ENST00000557177 FAM161AQ3B820 660 aa18.47■□□□□ 0.55
VRTN-202ENST00000557177 TXNRD3Q86VQ6 643 aa18.46■□□□□ 0.55
VRTN-202ENST00000557177 RASAL3Q86YV0 1011 aa18.46■□□□□ 0.55
VRTN-202ENST00000557177 MXD3Q9BW11 206 aa18.46■□□□□ 0.55
VRTN-202ENST00000557177 COA1Q9GZY4 146 aa18.46■□□□□ 0.55
VRTN-202ENST00000557177 LEMD3Q9Y2U8 911 aa18.46■□□□□ 0.55
VRTN-202ENST00000557177 MYO3BQ8WXR4 1341 aa18.46■□□□□ 0.55
VRTN-202ENST00000557177 FANCIQ9NVI1 1328 aa18.46■□□□□ 0.55
VRTN-202ENST00000557177 CSF1RP07333 972 aa18.45■□□□□ 0.54
VRTN-202ENST00000557177 ITGA6P23229 1130 aa18.45■□□□□ 0.54
VRTN-202ENST00000557177 IGHMBP2P38935 993 aaKnown RBP18.45■□□□□ 0.54
VRTN-202ENST00000557177 DGKZQ13574 1117 aa18.45■□□□□ 0.54
VRTN-202ENST00000557177 NBPF9Q3BBW0 867 aa18.45■□□□□ 0.54
VRTN-202ENST00000557177 STRIP1Q5VSL9 837 aa18.45■□□□□ 0.54
VRTN-202ENST00000557177 DNAAF4Q8WXU2 420 aa18.45■□□□□ 0.54
VRTN-202ENST00000557177 CSRNP1Q96S65 589 aa18.45■□□□□ 0.54
VRTN-202ENST00000557177 RNF186Q9NXI6 227 aa18.45■□□□□ 0.54
VRTN-202ENST00000557177 A0A1B0GUL6 1792 aa18.45■□□□□ 0.54
VRTN-202ENST00000557177 FKBP5Q13451 457 aaPredicted RBP18.44■□□□□ 0.54
VRTN-202ENST00000557177 LINS1Q8NG48 757 aa18.44■□□□□ 0.54
VRTN-202ENST00000557177 MYH16Q9H6N6 1097 aa18.44■□□□□ 0.54
VRTN-202ENST00000557177 SCAF8Q9UPN6 1271 aaKnown RBP18.44■□□□□ 0.54
VRTN-202ENST00000557177 ZNF804BA4D1E1 1349 aa18.44■□□□□ 0.54
VRTN-202ENST00000557177 TNRC18O15417 2968 aaPredicted RBP18.43■□□□□ 0.54
VRTN-202ENST00000557177 WNT10BO00744 389 aa18.43■□□□□ 0.54
VRTN-202ENST00000557177 TRPA1O75762 1119 aa18.43■□□□□ 0.54
VRTN-202ENST00000557177 KLRK1P26718 216 aa18.43■□□□□ 0.54
VRTN-202ENST00000557177 MMP14P50281 582 aa18.43■□□□□ 0.54
VRTN-202ENST00000557177 REM2Q8IYK8 340 aaPredicted RBP18.43■□□□□ 0.54
VRTN-202ENST00000557177 OGFOD1Q8N543 542 aa18.43■□□□□ 0.54
VRTN-202ENST00000557177 ANKRD2Q9GZV1 360 aa18.43■□□□□ 0.54
VRTN-202ENST00000557177 VAMP4O75379 141 aa18.42■□□□□ 0.54
VRTN-202ENST00000557177 MLLT1Q03111 559 aaPredicted RBP18.42■□□□□ 0.54
VRTN-202ENST00000557177 MOB2Q70IA6 237 aa18.42■□□□□ 0.54
VRTN-202ENST00000557177 MPHOSPH8Q99549 860 aa18.42■□□□□ 0.54
VRTN-202ENST00000557177 WDR63Q8IWG1 891 aa18.41■□□□□ 0.54
VRTN-202ENST00000557177 FBXW7Q969H0 707 aa18.41■□□□□ 0.54
VRTN-202ENST00000557177 IRS2Q9Y4H2 1338 aa18.41■□□□□ 0.54
VRTN-202ENST00000557177 CHRNDQ07001 517 aa18.4■□□□□ 0.54
VRTN-202ENST00000557177 PRAMEF18Q5VWM3 479 aa18.4■□□□□ 0.54
VRTN-202ENST00000557177 TTLL5Q6EMB2 1281 aa18.4■□□□□ 0.54
VRTN-202ENST00000557177 MRS2Q9HD23 443 aa18.4■□□□□ 0.54
VRTN-202ENST00000557177 UBE2Q2LH0YL09 131 aa18.39■□□□□ 0.53
VRTN-202ENST00000557177 SASH1O94885 1247 aa18.39■□□□□ 0.53
VRTN-202ENST00000557177 ZBED3Q96IU2 234 aaPredicted RBP18.39■□□□□ 0.53
VRTN-202ENST00000557177 ANKRD18BA2A2Z9 1011 aa18.38■□□□□ 0.53
VRTN-202ENST00000557177 GTF2IP78347 998 aa18.38■□□□□ 0.53
VRTN-202ENST00000557177 FOXO4P98177 505 aa18.38■□□□□ 0.53
VRTN-202ENST00000557177 EXOSC9Q06265 439 aaKnown RBP18.38■□□□□ 0.53
VRTN-202ENST00000557177 C15orf52Q6ZUT6 534 aaKnown RBP18.38■□□□□ 0.53
VRTN-202ENST00000557177 KIAA0825Q8IV33 1275 aa18.38■□□□□ 0.53
VRTN-202ENST00000557177 CD209Q9NNX6 404 aa18.38■□□□□ 0.53
VRTN-202ENST00000557177 ECM29Q5VYK3 1845 aa18.37■□□□□ 0.53
VRTN-202ENST00000557177 KCNJ4P48050 445 aa18.37■□□□□ 0.53
VRTN-202ENST00000557177 BEND3Q5T5X7 828 aa18.37■□□□□ 0.53
VRTN-202ENST00000557177 HDAC9Q9UKV0 1011 aa18.37■□□□□ 0.53
VRTN-202ENST00000557177 F6X3S4 739 aa18.36■□□□□ 0.53
VRTN-202ENST00000557177 SNAP23O00161 211 aa18.36■□□□□ 0.53
VRTN-202ENST00000557177 COL1A1P02452 1464 aaPredicted RBP18.36■□□□□ 0.53
VRTN-202ENST00000557177 NF2P35240 595 aa18.36■□□□□ 0.53
VRTN-202ENST00000557177 APOBEC3FQ8IUX4 373 aaKnown RBP18.36■□□□□ 0.53
VRTN-202ENST00000557177 SPINK5Q9NQ38 1064 aaPredicted RBP18.36■□□□□ 0.53
VRTN-202ENST00000557177 TAF5LO75529 589 aa18.35■□□□□ 0.53
VRTN-202ENST00000557177 IFIT5Q13325 482 aaKnown RBP18.35■□□□□ 0.53
VRTN-202ENST00000557177 TTLL12Q14166 644 aaPredicted RBP18.35■□□□□ 0.53
VRTN-202ENST00000557177 CERS5Q8N5B7 392 aa18.35■□□□□ 0.53
VRTN-202ENST00000557177 SALL2Q9Y467 1007 aaPredicted RBP18.35■□□□□ 0.53
VRTN-202ENST00000557177 TM4SF4P48230 202 aa18.34■□□□□ 0.53
VRTN-202ENST00000557177 CTU1Q7Z7A3 348 aaKnown RBP18.34■□□□□ 0.53
VRTN-202ENST00000557177 MTMR14Q8NCE2 650 aa18.34■□□□□ 0.53
VRTN-202ENST00000557177 HELBQ8NG08 1087 aaPredicted RBP18.34■□□□□ 0.53
VRTN-202ENST00000557177 IL1R1P14778 569 aa18.33■□□□□ 0.52
VRTN-202ENST00000557177 EPHA10Q5JZY3 1008 aa18.33■□□□□ 0.52
VRTN-202ENST00000557177 LAMB1P07942 1786 aa18.32■□□□□ 0.52
VRTN-202ENST00000557177 GRM8O00222 908 aa18.32■□□□□ 0.52
VRTN-202ENST00000557177 ANP32CO43423 234 aa18.32■□□□□ 0.52
VRTN-202ENST00000557177 PTPN12Q05209 780 aaKnown RBP18.32■□□□□ 0.52
VRTN-202ENST00000557177 LDLRAD1Q5T700 205 aa18.32■□□□□ 0.52
VRTN-202ENST00000557177 LMBR1LQ6UX01 489 aa18.32■□□□□ 0.52
VRTN-202ENST00000557177 ARMC9Q7Z3E5 817 aa18.32■□□□□ 0.52
VRTN-202ENST00000557177 CHMP3Q9Y3E7 222 aa18.32■□□□□ 0.52
VRTN-202ENST00000557177 SSC5DA1L4H1 1573 aa18.31■□□□□ 0.52
VRTN-202ENST00000557177 TBC1D8O95759 1140 aa18.31■□□□□ 0.52
VRTN-202ENST00000557177 FKBP1AP62942 108 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms