RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 ZC3H6P61129 1189 aaKnown RBP13.33□□□□□ -0.28
SRP54-213ENST00000556994 CCZ1BP86790 482 aa13.33□□□□□ -0.28
SRP54-213ENST00000556994 CCZ1P86791 482 aaPredicted RBP13.33□□□□□ -0.28
SRP54-213ENST00000556994 LMBR1LQ6UX01 489 aa13.33□□□□□ -0.28
SRP54-213ENST00000556994 KBTBD3Q8NAB2 608 aa13.33□□□□□ -0.28
SRP54-213ENST00000556994 LLPHQ9BRT6 129 aaKnown RBP13.33□□□□□ -0.28
SRP54-213ENST00000556994 SLC52A2Q9HAB3 445 aa13.33□□□□□ -0.28
SRP54-213ENST00000556994 GPHNQ9NQX3 736 aaPredicted RBP13.33□□□□□ -0.28
SRP54-213ENST00000556994 FAM160A1Q05DH4 1040 aa13.33□□□□□ -0.28
SRP54-213ENST00000556994 SYCP1Q15431 976 aa13.33□□□□□ -0.28
SRP54-213ENST00000556994 TTLL5Q6EMB2 1281 aa13.33□□□□□ -0.28
SRP54-213ENST00000556994 ANO10Q9NW15 660 aa13.33□□□□□ -0.28
SRP54-213ENST00000556994 CGNQ9P2M7 1197 aaKnown RBP13.33□□□□□ -0.28
SRP54-213ENST00000556994 PCDHA7Q9UN72 937 aa13.33□□□□□ -0.28
SRP54-213ENST00000556994 MRC1P22897 1456 aa13.33□□□□□ -0.28
SRP54-213ENST00000556994 E7EWF7 191 aa13.32□□□□□ -0.28
SRP54-213ENST00000556994 PDIA3P30101 505 aaKnown RBP13.32□□□□□ -0.28
SRP54-213ENST00000556994 EXOSC10Q01780 885 aaKnown RBP13.32□□□□□ -0.28
SRP54-213ENST00000556994 ZNF396Q96N95 335 aaPredicted RBP13.32□□□□□ -0.28
SRP54-213ENST00000556994 SDF4Q9BRK5 362 aa13.32□□□□□ -0.28
SRP54-213ENST00000556994 POLR3DP05423 398 aaPredicted RBP13.31□□□□□ -0.28
SRP54-213ENST00000556994 NYAP1Q6ZVC0 841 aa13.31□□□□□ -0.28
SRP54-213ENST00000556994 PAG1Q9NWQ8 432 aa13.31□□□□□ -0.28
SRP54-213ENST00000556994 LAMA4Q16363 1823 aa13.31□□□□□ -0.28
SRP54-213ENST00000556994 HMGB1P09429 215 aaKnown RBP13.31□□□□□ -0.28
SRP54-213ENST00000556994 HSPD1P10809 573 aaKnown RBP13.31□□□□□ -0.28
SRP54-213ENST00000556994 NDUFA8P51970 172 aa13.31□□□□□ -0.28
SRP54-213ENST00000556994 LRP10Q7Z4F1 713 aa13.31□□□□□ -0.28
SRP54-213ENST00000556994 NBPF11Q86T75 865 aa13.31□□□□□ -0.28
SRP54-213ENST00000556994 RAB11FIP4Q86YS3 637 aa13.31□□□□□ -0.28
SRP54-213ENST00000556994 CEP57L1Q8IYX8 460 aa13.31□□□□□ -0.28
SRP54-213ENST00000556994 FMNL2Q96PY5 1086 aa13.31□□□□□ -0.28
SRP54-213ENST00000556994 GJB4Q9NTQ9 266 aa13.31□□□□□ -0.28
SRP54-213ENST00000556994 NLRP2Q9NX02 1062 aa13.31□□□□□ -0.28
SRP54-213ENST00000556994 DDX41Q9UJV9 622 aaKnown RBP13.31□□□□□ -0.28
SRP54-213ENST00000556994 TAOK2Q9UL54 1235 aa13.31□□□□□ -0.28
SRP54-213ENST00000556994 BIN1O00499 593 aa13.3□□□□□ -0.28
SRP54-213ENST00000556994 NEMFO60524 1076 aa13.3□□□□□ -0.28
SRP54-213ENST00000556994 FDPSP14324 419 aaKnown RBP13.3□□□□□ -0.28
SRP54-213ENST00000556994 RABL6Q3YEC7 729 aaPredicted RBP13.3□□□□□ -0.28
SRP54-213ENST00000556994 KMT5BQ4FZB7 885 aa13.3□□□□□ -0.28
SRP54-213ENST00000556994 CCAR2Q8N163 923 aaKnown RBP13.3□□□□□ -0.28
SRP54-213ENST00000556994 KIF18AQ8NI77 898 aa13.3□□□□□ -0.28
SRP54-213ENST00000556994 CLIC4Q9Y696 253 aa13.3□□□□□ -0.28
SRP54-213ENST00000556994 C5P01031 1676 aa13.3□□□□□ -0.28
SRP54-213ENST00000556994 OVOS2A0A0G2JMS6 1433 aa13.3□□□□□ -0.28
SRP54-213ENST00000556994 ELF2Q15723 593 aa13.3□□□□□ -0.28
SRP54-213ENST00000556994 DPCR1Q3MIW9 517 aa13.3□□□□□ -0.28
SRP54-213ENST00000556994 ISM2Q6H9L7 571 aa13.3□□□□□ -0.28
SRP54-213ENST00000556994 FMR1NBQ8N0W7 255 aaPredicted RBP13.3□□□□□ -0.28
SRP54-213ENST00000556994 RAPGEF4Q8WZA2 1011 aa13.3□□□□□ -0.28
SRP54-213ENST00000556994 SH3TC1Q8TE82 1336 aa13.3□□□□□ -0.28
SRP54-213ENST00000556994 FER1L4A9Z1Z3 1794 aa13.29□□□□□ -0.28
SRP54-213ENST00000556994 SIPA1L3O60292 1781 aaPredicted RBP13.29□□□□□ -0.28
SRP54-213ENST00000556994 HAND2P61296 217 aa13.29□□□□□ -0.28
SRP54-213ENST00000556994 ZNF771Q7L3S4 317 aaPredicted RBP13.29□□□□□ -0.28
SRP54-213ENST00000556994 MRPS27Q92552 414 aaKnown RBP13.29□□□□□ -0.28
SRP54-213ENST00000556994 ZNF594Q96JF6 807 aaPredicted RBP13.29□□□□□ -0.28
SRP54-213ENST00000556994 SALL1Q9NSC2 1324 aa13.29□□□□□ -0.28
SRP54-213ENST00000556994 CARMIL3Q8ND23 1372 aa13.29□□□□□ -0.28
SRP54-213ENST00000556994 KIF20AO95235 890 aa13.29□□□□□ -0.28
SRP54-213ENST00000556994 SMC2O95347 1197 aa13.29□□□□□ -0.28
SRP54-213ENST00000556994 SF3A1Q15459 793 aaKnown RBP13.29□□□□□ -0.28
SRP54-213ENST00000556994 TTC5Q8N0Z6 440 aa13.29□□□□□ -0.28
SRP54-213ENST00000556994 DSCC1Q9BVC3 393 aa13.29□□□□□ -0.28
SRP54-213ENST00000556994 AGXT2Q9BYV1 514 aa13.29□□□□□ -0.28
SRP54-213ENST00000556994 HELLSQ9NRZ9 838 aa13.29□□□□□ -0.28
SRP54-213ENST00000556994 KDM6AO15550 1401 aaPredicted RBP13.29□□□□□ -0.28
SRP54-213ENST00000556994 MYH15Q9Y2K3 1946 aa13.29□□□□□ -0.28
SRP54-213ENST00000556994 SNRPA1P09661 255 aaKnown RBP13.28□□□□□ -0.28
SRP54-213ENST00000556994 PHKG2P15735 406 aa13.28□□□□□ -0.28
SRP54-213ENST00000556994 LRRC24Q50LG9 513 aa13.28□□□□□ -0.28
SRP54-213ENST00000556994 ZMYM1Q5SVZ6 1142 aa13.28□□□□□ -0.28
SRP54-213ENST00000556994 ATG9AQ7Z3C6 839 aa13.28□□□□□ -0.28
SRP54-213ENST00000556994 TMC6Q7Z403 805 aa13.28□□□□□ -0.28
SRP54-213ENST00000556994 XPO4Q9C0E2 1151 aaKnown RBP13.28□□□□□ -0.28
SRP54-213ENST00000556994 IFNKQ9P0W0 207 aa13.28□□□□□ -0.28
SRP54-213ENST00000556994 RFX7Q2KHR2 1363 aa13.28□□□□□ -0.28
SRP54-213ENST00000556994 MAST3O60307 1309 aa13.28□□□□□ -0.28
SRP54-213ENST00000556994 M0R2C6 588 aa13.28□□□□□ -0.28
SRP54-213ENST00000556994 CASP7P55210 303 aa13.28□□□□□ -0.28
SRP54-213ENST00000556994 STK38Q15208 465 aa13.28□□□□□ -0.28
SRP54-213ENST00000556994 ADALQ6DHV7 355 aa13.28□□□□□ -0.28
SRP54-213ENST00000556994 FBXO38Q6PIJ6 1188 aa13.28□□□□□ -0.28
SRP54-213ENST00000556994 NAT10Q9H0A0 1025 aaKnown RBP13.28□□□□□ -0.28
SRP54-213ENST00000556994 ERBB3P21860 1342 aa13.27□□□□□ -0.28
SRP54-213ENST00000556994 FOXO4P98177 505 aa13.27□□□□□ -0.28
SRP54-213ENST00000556994 ZRSR1Q15695 479 aaKnown RBP13.27□□□□□ -0.28
SRP54-213ENST00000556994 E4F1Q66K89 784 aaPredicted RBP13.27□□□□□ -0.28
SRP54-213ENST00000556994 LINC00301Q8NCQ3 95 aa13.27□□□□□ -0.28
SRP54-213ENST00000556994 ZNF274Q96GC6 653 aaPredicted RBP13.27□□□□□ -0.28
SRP54-213ENST00000556994 KIAA1468Q9P260 1216 aa13.27□□□□□ -0.28
SRP54-213ENST00000556994 MORC2Q9Y6X9 1032 aaPredicted RBP13.27□□□□□ -0.28
SRP54-213ENST00000556994 IFIT1P09914 478 aaKnown RBP13.27□□□□□ -0.29
SRP54-213ENST00000556994 HSP90AB3PQ58FF7 597 aa13.27□□□□□ -0.29
SRP54-213ENST00000556994 ATL3Q6DD88 541 aa13.27□□□□□ -0.29
SRP54-213ENST00000556994 ARMCX5Q6P1M9 558 aa13.27□□□□□ -0.29
SRP54-213ENST00000556994 LRRN4CLQ8ND94 238 aa13.27□□□□□ -0.29
SRP54-213ENST00000556994 ZNF397Q8NF99 534 aaPredicted RBP13.27□□□□□ -0.29
SRP54-213ENST00000556994 RTEL1Q9NZ71 1219 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms