RNA–Protein interactions for RNA: ENST00000556853.5

CNOT10-219, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 4

Gene CNOT10, Length 551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-219ENST00000556853 RTF1Q92541 710 aaKnown RBP16.27■□□□□ 0.2
CNOT10-219ENST00000556853 GDF15Q99988 308 aa16.27■□□□□ 0.2
CNOT10-219ENST00000556853 PODXL2Q9NZ53 605 aa16.27■□□□□ 0.2
CNOT10-219ENST00000556853 SPTBN5Q9NRC6 3674 aaKnown RBP16.27■□□□□ 0.19
CNOT10-219ENST00000556853 SH3TC1Q8TE82 1336 aa16.26■□□□□ 0.19
CNOT10-219ENST00000556853 USP17L3A6NCW0 530 aa16.26■□□□□ 0.19
CNOT10-219ENST00000556853 USP17L4A6NCW7 530 aa16.26■□□□□ 0.19
CNOT10-219ENST00000556853 UNCXA6NJT0 531 aa16.26■□□□□ 0.19
CNOT10-219ENST00000556853 EVI5O60447 810 aa16.26■□□□□ 0.19
CNOT10-219ENST00000556853 GJB1P08034 283 aa16.26■□□□□ 0.19
CNOT10-219ENST00000556853 DCTN1Q14203 1278 aa16.26■□□□□ 0.19
CNOT10-219ENST00000556853 TAF7Q15545 349 aaPredicted RBP16.26■□□□□ 0.19
CNOT10-219ENST00000556853 USP17L1Q7RTZ2 530 aa16.26■□□□□ 0.19
CNOT10-219ENST00000556853 MIS18AQ9NYP9 233 aa16.26■□□□□ 0.19
CNOT10-219ENST00000556853 TRMT112Q9UI30 125 aaKnown RBP16.26■□□□□ 0.19
CNOT10-219ENST00000556853 ZSWIM8A7E2V4 1837 aa16.26■□□□□ 0.19
CNOT10-219ENST00000556853 LRP10Q7Z4F1 713 aa16.25■□□□□ 0.19
CNOT10-219ENST00000556853 APOBEC3FQ8IUX4 373 aaKnown RBP16.25■□□□□ 0.19
CNOT10-219ENST00000556853 ARHGAP39Q9C0H5 1083 aa16.25■□□□□ 0.19
CNOT10-219ENST00000556853 PRKAR2BP31323 418 aa16.24■□□□□ 0.19
CNOT10-219ENST00000556853 PRMT2P55345 433 aa16.24■□□□□ 0.19
CNOT10-219ENST00000556853 SF3B3Q15393 1217 aaKnown RBP16.24■□□□□ 0.19
CNOT10-219ENST00000556853 ZFYVE28Q9HCC9 887 aa16.24■□□□□ 0.19
CNOT10-219ENST00000556853 RPTORQ8N122 1335 aa16.23■□□□□ 0.19
CNOT10-219ENST00000556853 SSC5DA1L4H1 1573 aa16.23■□□□□ 0.19
CNOT10-219ENST00000556853 UFL1O94874 794 aa16.23■□□□□ 0.19
CNOT10-219ENST00000556853 SASH1O94885 1247 aa16.23■□□□□ 0.19
CNOT10-219ENST00000556853 FARP2O94887 1054 aaPredicted RBP16.23■□□□□ 0.19
CNOT10-219ENST00000556853 GNRH1P01148 92 aa16.23■□□□□ 0.19
CNOT10-219ENST00000556853 PLA2G5P39877 138 aa16.23■□□□□ 0.19
CNOT10-219ENST00000556853 BCAMP50895 628 aa16.23■□□□□ 0.19
CNOT10-219ENST00000556853 TAF1CQ15572 869 aaPredicted RBP16.23■□□□□ 0.19
CNOT10-219ENST00000556853 OGFOD1Q8N543 542 aa16.23■□□□□ 0.19
CNOT10-219ENST00000556853 COL1A1P02452 1464 aaPredicted RBP16.22■□□□□ 0.19
CNOT10-219ENST00000556853 PPP1R12BO60237 982 aaPredicted RBP16.22■□□□□ 0.19
CNOT10-219ENST00000556853 HSP90AB3PQ58FF7 597 aa16.22■□□□□ 0.19
CNOT10-219ENST00000556853 PODNQ7Z5L7 613 aa16.22■□□□□ 0.19
CNOT10-219ENST00000556853 MS4A4AQ96JQ5 239 aa16.22■□□□□ 0.19
CNOT10-219ENST00000556853 THUMPD2Q9BTF0 503 aaKnown RBP16.22■□□□□ 0.19
CNOT10-219ENST00000556853 RSPH6AQ9H0K4 717 aa16.22■□□□□ 0.19
CNOT10-219ENST00000556853 RAPGEFL1Q9UHV5 662 aa16.22■□□□□ 0.19
CNOT10-219ENST00000556853 HTATSF1O43719 755 aaKnown RBP16.21■□□□□ 0.19
CNOT10-219ENST00000556853 CCL5P13501 91 aa16.21■□□□□ 0.19
CNOT10-219ENST00000556853 EIF4A1P60842 406 aaKnown RBP16.21■□□□□ 0.19
CNOT10-219ENST00000556853 RPS8P62241 208 aaKnown RBP16.21■□□□□ 0.19
CNOT10-219ENST00000556853 LACTBP83111 547 aaPredicted RBP16.21■□□□□ 0.19
CNOT10-219ENST00000556853 KIF22Q14807 665 aa16.21■□□□□ 0.19
CNOT10-219ENST00000556853 GGA1Q9UJY5 639 aa16.21■□□□□ 0.19
CNOT10-219ENST00000556853 PDIA6Q15084 440 aa16.2■□□□□ 0.18
CNOT10-219ENST00000556853 MXD3Q9BW11 206 aa16.2■□□□□ 0.18
CNOT10-219ENST00000556853 RNF208Q9H0X6 261 aa16.2■□□□□ 0.18
CNOT10-219ENST00000556853 DEFB129Q9H1M3 183 aa16.2■□□□□ 0.18
CNOT10-219ENST00000556853 ANKIB1Q9P2G1 1089 aa16.2■□□□□ 0.18
CNOT10-219ENST00000556853 ALPK3Q96L96 1907 aa16.19■□□□□ 0.18
CNOT10-219ENST00000556853 DACT2Q5SW24 774 aa16.19■□□□□ 0.18
CNOT10-219ENST00000556853 U2AF1L4Q8WU68 220 aaKnown RBP16.19■□□□□ 0.18
CNOT10-219ENST00000556853 BRI3BPQ8WY22 251 aa16.19■□□□□ 0.18
CNOT10-219ENST00000556853 ZBED3Q96IU2 234 aaPredicted RBP16.19■□□□□ 0.18
CNOT10-219ENST00000556853 GUCD1Q96NT3 240 aa16.19■□□□□ 0.18
CNOT10-219ENST00000556853 GRK4P32298 578 aa16.18■□□□□ 0.18
CNOT10-219ENST00000556853 MMP14P50281 582 aa16.18■□□□□ 0.18
CNOT10-219ENST00000556853 ANKRD13AQ8IZ07 590 aa16.18■□□□□ 0.18
CNOT10-219ENST00000556853 TDHQ8IZJ6 230 aa16.18■□□□□ 0.18
CNOT10-219ENST00000556853 MYO3BQ8WXR4 1341 aa16.18■□□□□ 0.18
CNOT10-219ENST00000556853 TLR2O60603 784 aa16.17■□□□□ 0.18
CNOT10-219ENST00000556853 USP2O75604 605 aaPredicted RBP16.17■□□□□ 0.18
CNOT10-219ENST00000556853 HOXD11P31277 338 aaPredicted RBP16.17■□□□□ 0.18
CNOT10-219ENST00000556853 IREB2P48200 963 aaKnown RBP16.17■□□□□ 0.18
CNOT10-219ENST00000556853 FAM43AQ8N2R8 423 aa16.17■□□□□ 0.18
CNOT10-219ENST00000556853 PNISRQ8TF01 805 aaKnown RBP16.17■□□□□ 0.18
CNOT10-219ENST00000556853 OPTNQ96CV9 577 aa16.17■□□□□ 0.18
CNOT10-219ENST00000556853 FAM122AQ96E09 287 aa16.17■□□□□ 0.18
CNOT10-219ENST00000556853 SGPL1O95470 568 aa16.16■□□□□ 0.18
CNOT10-219ENST00000556853 ZNF428Q96B54 188 aa16.16■□□□□ 0.18
CNOT10-219ENST00000556853 SRRDQ9UH36 339 aa16.16■□□□□ 0.18
CNOT10-219ENST00000556853 RIPOR2Q9Y4F9 1068 aa16.16■□□□□ 0.18
CNOT10-219ENST00000556853 PPP2R3BQ9Y5P8 575 aa16.16■□□□□ 0.18
CNOT10-219ENST00000556853 CCL15-CCL14A0A0B4J2E2 113 aa16.15■□□□□ 0.18
CNOT10-219ENST00000556853 CCL15Q16663 113 aa16.15■□□□□ 0.18
CNOT10-219ENST00000556853 PROSER3Q2NL68 480 aa16.15■□□□□ 0.18
CNOT10-219ENST00000556853 SUPT20HL1Q3ZLR7 823 aa16.15■□□□□ 0.18
CNOT10-219ENST00000556853 FAM109BQ6ICB4 259 aaPredicted RBP16.15■□□□□ 0.18
CNOT10-219ENST00000556853 POTEB2H3BUK9 544 aa16.14■□□□□ 0.17
CNOT10-219ENST00000556853 ANXA1P04083 346 aa16.14■□□□□ 0.17
CNOT10-219ENST00000556853 CTGFP29279 349 aa16.14■□□□□ 0.17
CNOT10-219ENST00000556853 UBXN2AP68543 259 aa16.14■□□□□ 0.17
CNOT10-219ENST00000556853 STRIP1Q5VSL9 837 aa16.14■□□□□ 0.17
CNOT10-219ENST00000556853 RAET1EQ8TD07 263 aa16.14■□□□□ 0.17
CNOT10-219ENST00000556853 SYMPKQ92797 1274 aaKnown RBP16.14■□□□□ 0.17
CNOT10-219ENST00000556853 FAM89AQ96GI7 184 aa16.14■□□□□ 0.17
CNOT10-219ENST00000556853 TRIM47Q96LD4 638 aa16.14■□□□□ 0.17
CNOT10-219ENST00000556853 ELP3Q9H9T3 547 aa16.14■□□□□ 0.17
CNOT10-219ENST00000556853 OTOFQ9HC10 1997 aa16.14■□□□□ 0.17
CNOT10-219ENST00000556853 GTF2A2P52657 109 aa16.13■□□□□ 0.17
CNOT10-219ENST00000556853 NBPF12Q5TAG4 269 aaPredicted RBP16.13■□□□□ 0.17
CNOT10-219ENST00000556853 COPS6Q7L5N1 327 aa16.13■□□□□ 0.17
CNOT10-219ENST00000556853 UNC93B1Q9H1C4 597 aa16.13■□□□□ 0.17
CNOT10-219ENST00000556853 ZMYND8Q9ULU4 1186 aaPredicted RBP16.13■□□□□ 0.17
CNOT10-219ENST00000556853 IRS2Q9Y4H2 1338 aa16.13■□□□□ 0.17
CNOT10-219ENST00000556853 CAPN2P17655 700 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms