RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 GPRC5DQ9NZD1 345 aa9.2□□□□□ -0.94
PCNX1-213ENST00000556846 ABT1Q9ULW3 272 aaKnown RBP9.2□□□□□ -0.94
PCNX1-213ENST00000556846 PASKQ96RG2 1323 aa9.2□□□□□ -0.94
PCNX1-213ENST00000556846 SNED1Q8TER0 1413 aa9.2□□□□□ -0.94
PCNX1-213ENST00000556846 H7C1D1 291 aa9.19□□□□□ -0.94
PCNX1-213ENST00000556846 HSPA1AP0DMV8 641 aaKnown RBP9.19□□□□□ -0.94
PCNX1-213ENST00000556846 HSPA1BP0DMV9 641 aaKnown RBP9.19□□□□□ -0.94
PCNX1-213ENST00000556846 DBNDD1Q9H9R9 158 aa9.19□□□□□ -0.94
PCNX1-213ENST00000556846 IL16Q14005 1332 aa9.19□□□□□ -0.94
PCNX1-213ENST00000556846 PBX2P40425 430 aa9.18□□□□□ -0.94
PCNX1-213ENST00000556846 DEFB115Q30KQ5 88 aa9.18□□□□□ -0.94
PCNX1-213ENST00000556846 ANKRD18AQ8IVF6 992 aa9.18□□□□□ -0.94
PCNX1-213ENST00000556846 WDR63Q8IWG1 891 aa9.18□□□□□ -0.94
PCNX1-213ENST00000556846 TBC1D16Q8TBP0 767 aa9.18□□□□□ -0.94
PCNX1-213ENST00000556846 POLLQ9UGP5 575 aa9.18□□□□□ -0.94
PCNX1-213ENST00000556846 CNOT7Q9UIV1 285 aaKnown RBP9.18□□□□□ -0.94
PCNX1-213ENST00000556846 DICER1Q9UPY3 1922 aaKnown RBP9.18□□□□□ -0.94
PCNX1-213ENST00000556846 UFL1O94874 794 aa9.17□□□□□ -0.94
PCNX1-213ENST00000556846 VEGFBP49765 207 aa9.17□□□□□ -0.94
PCNX1-213ENST00000556846 EXOSC9Q06265 439 aaKnown RBP9.17□□□□□ -0.94
PCNX1-213ENST00000556846 GRM1Q13255 1194 aa9.17□□□□□ -0.94
PCNX1-213ENST00000556846 FKBP5Q13451 457 aaPredicted RBP9.17□□□□□ -0.94
PCNX1-213ENST00000556846 CWF19L2Q2TBE0 894 aaKnown RBP9.17□□□□□ -0.94
PCNX1-213ENST00000556846 RBM26Q5T8P6 1007 aaKnown RBP9.17□□□□□ -0.94
PCNX1-213ENST00000556846 COL13A1Q5TAT6 717 aaPredicted RBP9.17□□□□□ -0.94
PCNX1-213ENST00000556846 G2E3Q7L622 706 aa9.17□□□□□ -0.94
PCNX1-213ENST00000556846 AIDAQ96BJ3 306 aa9.17□□□□□ -0.94
PCNX1-213ENST00000556846 CDC5LQ99459 802 aaKnown RBP9.17□□□□□ -0.94
PCNX1-213ENST00000556846 MYH16Q9H6N6 1097 aa9.17□□□□□ -0.94
PCNX1-213ENST00000556846 GGA1Q9UJY5 639 aa9.17□□□□□ -0.94
PCNX1-213ENST00000556846 COL4A5P29400 1685 aa9.16□□□□□ -0.94
PCNX1-213ENST00000556846 CNTNAP1P78357 1384 aa9.16□□□□□ -0.94
PCNX1-213ENST00000556846 FANCIQ9NVI1 1328 aa9.16□□□□□ -0.94
PCNX1-213ENST00000556846 YDJCA8MPS7 323 aa9.16□□□□□ -0.94
PCNX1-213ENST00000556846 TRAF5O00463 557 aa9.16□□□□□ -0.94
PCNX1-213ENST00000556846 PSMD14O00487 310 aa9.16□□□□□ -0.94
PCNX1-213ENST00000556846 ECE2O60344 883 aa9.16□□□□□ -0.94
PCNX1-213ENST00000556846 IGKV5-2P06315 115 aa9.16□□□□□ -0.94
PCNX1-213ENST00000556846 CTSWP56202 376 aa9.16□□□□□ -0.94
PCNX1-213ENST00000556846 FMR1Q06787 632 aaKnown RBP eCLIP9.16□□□□□ -0.94
PCNX1-213ENST00000556846 FLIIQ13045 1269 aa9.16□□□□□ -0.94
PCNX1-213ENST00000556846 UBE3BQ7Z3V4 1068 aa9.16□□□□□ -0.94
PCNX1-213ENST00000556846 TNS4Q8IZW8 715 aa9.16□□□□□ -0.94
PCNX1-213ENST00000556846 GPR101Q96P66 508 aaPredicted RBP9.16□□□□□ -0.94
PCNX1-213ENST00000556846 ZNF408Q9H9D4 720 aa9.16□□□□□ -0.94
PCNX1-213ENST00000556846 SCN4AP35499 1836 aa9.16□□□□□ -0.94
PCNX1-213ENST00000556846 CDHR2Q9BYE9 1310 aa9.15□□□□□ -0.94
PCNX1-213ENST00000556846 RASSF10A6NK89 507 aa9.15□□□□□ -0.94
PCNX1-213ENST00000556846 NEURL1BA8MQ27 555 aa9.15□□□□□ -0.94
PCNX1-213ENST00000556846 VAMP4O75379 141 aa9.15□□□□□ -0.94
PCNX1-213ENST00000556846 ATP2B4P23634 1241 aa9.15□□□□□ -0.94
PCNX1-213ENST00000556846 IGHMBP2P38935 993 aaKnown RBP9.15□□□□□ -0.94
PCNX1-213ENST00000556846 POTEEQ6S8J3 1075 aa9.15□□□□□ -0.94
PCNX1-213ENST00000556846 CDC37L1Q7L3B6 337 aa9.15□□□□□ -0.94
PCNX1-213ENST00000556846 TTLL11Q8NHH1 800 aa9.15□□□□□ -0.94
PCNX1-213ENST00000556846 ZC3H15Q8WU90 426 aaKnown RBP9.15□□□□□ -0.94
PCNX1-213ENST00000556846 DNAAF4Q8WXU2 420 aa9.15□□□□□ -0.94
PCNX1-213ENST00000556846 DPF2Q92785 391 aa9.15□□□□□ -0.94
PCNX1-213ENST00000556846 GLIS2Q9BZE0 524 aaPredicted RBP9.15□□□□□ -0.94
PCNX1-213ENST00000556846 KCNQ5Q9NR82 932 aa9.15□□□□□ -0.94
PCNX1-213ENST00000556846 PODXL2Q9NZ53 605 aa9.15□□□□□ -0.94
PCNX1-213ENST00000556846 ANKRD36CQ5JPF3 1778 aa9.14□□□□□ -0.95
PCNX1-213ENST00000556846 XDHP47989 1333 aa9.14□□□□□ -0.95
PCNX1-213ENST00000556846 WDR33Q9C0J8 1336 aaKnown RBP9.14□□□□□ -0.95
PCNX1-213ENST00000556846 SHTN1A0MZ66 631 aa9.14□□□□□ -0.95
PCNX1-213ENST00000556846 H7C1W4 665 aa9.14□□□□□ -0.95
PCNX1-213ENST00000556846 CELF2O95319 508 aaKnown RBP9.14□□□□□ -0.95
PCNX1-213ENST00000556846 RPS12P25398 132 aaKnown RBP9.14□□□□□ -0.95
PCNX1-213ENST00000556846 ECE1P42892 770 aa9.14□□□□□ -0.95
PCNX1-213ENST00000556846 HIRAP54198 1017 aaPredicted RBP9.14□□□□□ -0.95
PCNX1-213ENST00000556846 GCKRQ14397 625 aa9.14□□□□□ -0.95
PCNX1-213ENST00000556846 TBC1D10BQ4KMP7 808 aaPredicted RBP9.14□□□□□ -0.95
PCNX1-213ENST00000556846 SAMD7Q7Z3H4 446 aa9.14□□□□□ -0.95
PCNX1-213ENST00000556846 USP48Q86UV5 1035 aa9.14□□□□□ -0.95
PCNX1-213ENST00000556846 LINS1Q8NG48 757 aa9.14□□□□□ -0.95
PCNX1-213ENST00000556846 TRPM4Q8TD43 1214 aa9.14□□□□□ -0.95
PCNX1-213ENST00000556846 RNF25Q96BH1 459 aaPredicted RBP9.14□□□□□ -0.95
PCNX1-213ENST00000556846 DCPSQ96C86 337 aaKnown RBP9.14□□□□□ -0.95
PCNX1-213ENST00000556846 BEGAINQ9BUH8 593 aa9.14□□□□□ -0.95
PCNX1-213ENST00000556846 GREM2Q9H772 168 aa9.14□□□□□ -0.95
PCNX1-213ENST00000556846 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.13□□□□□ -0.95
PCNX1-213ENST00000556846 RIOK3O14730 519 aaKnown RBP9.13□□□□□ -0.95
PCNX1-213ENST00000556846 MAP2K1Q02750 393 aaPredicted RBP9.13□□□□□ -0.95
PCNX1-213ENST00000556846 CST9Q5W186 159 aa9.13□□□□□ -0.95
PCNX1-213ENST00000556846 FBXW7Q969H0 707 aa9.13□□□□□ -0.95
PCNX1-213ENST00000556846 ZFP91Q96JP5 570 aaPredicted RBP9.13□□□□□ -0.95
PCNX1-213ENST00000556846 MPHOSPH8Q99549 860 aa9.13□□□□□ -0.95
PCNX1-213ENST00000556846 IRX2Q9BZI1 471 aaPredicted RBP9.13□□□□□ -0.95
PCNX1-213ENST00000556846 BSDC1Q9NW68 430 aaPredicted RBP9.13□□□□□ -0.95
PCNX1-213ENST00000556846 PGAP2Q9UHJ9 254 aa9.13□□□□□ -0.95
PCNX1-213ENST00000556846 MINPP1Q9UNW1 487 aa9.13□□□□□ -0.95
PCNX1-213ENST00000556846 CHMP3Q9Y3E7 222 aa9.13□□□□□ -0.95
PCNX1-213ENST00000556846 F6X3S4 739 aa9.12□□□□□ -0.95
PCNX1-213ENST00000556846 FOXN1O15353 648 aa9.12□□□□□ -0.95
PCNX1-213ENST00000556846 VIL1P09327 827 aaKnown RBP9.12□□□□□ -0.95
PCNX1-213ENST00000556846 ITGA6P23229 1130 aa9.12□□□□□ -0.95
PCNX1-213ENST00000556846 KCNJ4P48050 445 aa9.12□□□□□ -0.95
PCNX1-213ENST00000556846 CTCFP49711 727 aaPredicted RBP9.12□□□□□ -0.95
PCNX1-213ENST00000556846 CYP4F22Q6NT55 531 aa9.12□□□□□ -0.95
PCNX1-213ENST00000556846 KRT26Q7Z3Y9 468 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms