RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 PAPPA2Q9BXP8 1791 aa18.96■□□□□ 0.63
CHD8-211ENST00000556833 SLC4A2P04920 1241 aa18.96■□□□□ 0.63
CHD8-211ENST00000556833 SLC10A3P09131 477 aa18.96■□□□□ 0.63
CHD8-211ENST00000556833 MLLT1Q03111 559 aaPredicted RBP18.96■□□□□ 0.63
CHD8-211ENST00000556833 NBPF9Q3BBW0 867 aa18.96■□□□□ 0.63
CHD8-211ENST00000556833 TXNRD3Q86VQ6 643 aa18.96■□□□□ 0.63
CHD8-211ENST00000556833 CCDC102AQ96A19 550 aa18.96■□□□□ 0.63
CHD8-211ENST00000556833 GMLQ99445 158 aa18.96■□□□□ 0.63
CHD8-211ENST00000556833 RNF186Q9NXI6 227 aa18.96■□□□□ 0.63
CHD8-211ENST00000556833 MED23Q9ULK4 1368 aa18.95■□□□□ 0.62
CHD8-211ENST00000556833 SASH1O94885 1247 aa18.95■□□□□ 0.62
CHD8-211ENST00000556833 CCT4P50991 539 aaKnown RBP18.95■□□□□ 0.62
CHD8-211ENST00000556833 RASAL3Q86YV0 1011 aa18.95■□□□□ 0.62
CHD8-211ENST00000556833 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.95■□□□□ 0.62
CHD8-211ENST00000556833 UBE2Q2LH0YL09 131 aa18.94■□□□□ 0.62
CHD8-211ENST00000556833 MKRN3Q13064 507 aaKnown RBP18.94■□□□□ 0.62
CHD8-211ENST00000556833 TTLL12Q14166 644 aaPredicted RBP18.94■□□□□ 0.62
CHD8-211ENST00000556833 WWC1Q8IX03 1113 aa18.94■□□□□ 0.62
CHD8-211ENST00000556833 BSDC1Q9NW68 430 aaPredicted RBP18.94■□□□□ 0.62
CHD8-211ENST00000556833 ZNF609O15014 1411 aa18.93■□□□□ 0.62
CHD8-211ENST00000556833 IGHMBP2P38935 993 aaKnown RBP18.93■□□□□ 0.62
CHD8-211ENST00000556833 FKBP5Q13451 457 aaPredicted RBP18.93■□□□□ 0.62
CHD8-211ENST00000556833 PRKG1Q13976 671 aa18.93■□□□□ 0.62
CHD8-211ENST00000556833 DACT2Q5SW24 774 aa18.93■□□□□ 0.62
CHD8-211ENST00000556833 PODNQ7Z5L7 613 aa18.93■□□□□ 0.62
CHD8-211ENST00000556833 CSRNP1Q96S65 589 aa18.93■□□□□ 0.62
CHD8-211ENST00000556833 A0A1B0GUL6 1792 aa18.93■□□□□ 0.62
CHD8-211ENST00000556833 SNAP23O00161 211 aa18.92■□□□□ 0.62
CHD8-211ENST00000556833 ITGA6P23229 1130 aa18.92■□□□□ 0.62
CHD8-211ENST00000556833 FLIIQ13045 1269 aa18.92■□□□□ 0.62
CHD8-211ENST00000556833 H7C1W4 665 aa18.91■□□□□ 0.62
CHD8-211ENST00000556833 SOX10P56693 466 aa18.91■□□□□ 0.62
CHD8-211ENST00000556833 GCKRQ14397 625 aa18.91■□□□□ 0.62
CHD8-211ENST00000556833 KIAA0825Q8IV33 1275 aa18.91■□□□□ 0.62
CHD8-211ENST00000556833 CHMP4AQ9BY43 222 aa18.91■□□□□ 0.62
CHD8-211ENST00000556833 FANCIQ9NVI1 1328 aa18.91■□□□□ 0.62
CHD8-211ENST00000556833 KCNJ4P48050 445 aa18.9■□□□□ 0.62
CHD8-211ENST00000556833 MPHOSPH8Q99549 860 aa18.9■□□□□ 0.62
CHD8-211ENST00000556833 SAGE1Q9NXZ1 904 aa18.9■□□□□ 0.62
CHD8-211ENST00000556833 CHMP3Q9Y3E7 222 aa18.9■□□□□ 0.62
CHD8-211ENST00000556833 ZNF804BA4D1E1 1349 aa18.9■□□□□ 0.62
CHD8-211ENST00000556833 TNRC18O15417 2968 aaPredicted RBP18.89■□□□□ 0.61
CHD8-211ENST00000556833 WNT10BO00744 389 aa18.89■□□□□ 0.61
CHD8-211ENST00000556833 GTF2IP78347 998 aa18.89■□□□□ 0.61
CHD8-211ENST00000556833 OGFOD1Q8N543 542 aa18.89■□□□□ 0.61
CHD8-211ENST00000556833 HELBQ8NG08 1087 aaPredicted RBP18.89■□□□□ 0.61
CHD8-211ENST00000556833 DNAAF4Q8WXU2 420 aa18.89■□□□□ 0.61
CHD8-211ENST00000556833 COA1Q9GZY4 146 aa18.89■□□□□ 0.61
CHD8-211ENST00000556833 FZD1Q9UP38 647 aa18.89■□□□□ 0.61
CHD8-211ENST00000556833 CACNA1FO60840 1977 aa18.89■□□□□ 0.61
CHD8-211ENST00000556833 PITPNM2Q9BZ72 1349 aa18.89■□□□□ 0.61
CHD8-211ENST00000556833 F6X3S4 739 aa18.88■□□□□ 0.61
CHD8-211ENST00000556833 TAF5LO75529 589 aa18.88■□□□□ 0.61
CHD8-211ENST00000556833 TTLL5Q6EMB2 1281 aa18.88■□□□□ 0.61
CHD8-211ENST00000556833 MRS2Q9HD23 443 aa18.88■□□□□ 0.61
CHD8-211ENST00000556833 JAG2Q9Y219 1238 aa18.88■□□□□ 0.61
CHD8-211ENST00000556833 TBC1D8O95759 1140 aa18.87■□□□□ 0.61
CHD8-211ENST00000556833 CASP7P55210 303 aa18.87■□□□□ 0.61
CHD8-211ENST00000556833 CHRNDQ07001 517 aa18.87■□□□□ 0.61
CHD8-211ENST00000556833 CCDC27Q2M243 656 aa18.87■□□□□ 0.61
CHD8-211ENST00000556833 STRIP1Q5VSL9 837 aa18.87■□□□□ 0.61
CHD8-211ENST00000556833 MYH16Q9H6N6 1097 aa18.87■□□□□ 0.61
CHD8-211ENST00000556833 LEMD3Q9Y2U8 911 aa18.87■□□□□ 0.61
CHD8-211ENST00000556833 F8W031 263 aaPredicted RBP18.86■□□□□ 0.61
CHD8-211ENST00000556833 RGS19P49795 217 aa18.86■□□□□ 0.61
CHD8-211ENST00000556833 EXOSC9Q06265 439 aaKnown RBP18.86■□□□□ 0.61
CHD8-211ENST00000556833 PCDHAC2Q9Y5I4 1007 aa18.86■□□□□ 0.61
CHD8-211ENST00000556833 MYO3BQ8WXR4 1341 aa18.85■□□□□ 0.61
CHD8-211ENST00000556833 FKBP1BP68106 108 aa18.85■□□□□ 0.61
CHD8-211ENST00000556833 PLA2G12BQ9BX93 195 aa18.85■□□□□ 0.61
CHD8-211ENST00000556833 ANKRD2Q9GZV1 360 aa18.85■□□□□ 0.61
CHD8-211ENST00000556833 ECM29Q5VYK3 1845 aa18.84■□□□□ 0.61
CHD8-211ENST00000556833 ANKRD18BA2A2Z9 1011 aa18.84■□□□□ 0.61
CHD8-211ENST00000556833 PLIN1O60240 522 aa18.84■□□□□ 0.61
CHD8-211ENST00000556833 NF2P35240 595 aa18.84■□□□□ 0.61
CHD8-211ENST00000556833 LINS1Q8NG48 757 aa18.84■□□□□ 0.61
CHD8-211ENST00000556833 ZNF594Q96JF6 807 aaPredicted RBP18.84■□□□□ 0.61
CHD8-211ENST00000556833 PDE4DIPQ5VU43 2346 aa18.83■□□□□ 0.61
CHD8-211ENST00000556833 IL16Q14005 1332 aa18.83■□□□□ 0.61
CHD8-211ENST00000556833 VAMP4O75379 141 aa18.83■□□□□ 0.6
CHD8-211ENST00000556833 CSF1RP07333 972 aa18.83■□□□□ 0.6
CHD8-211ENST00000556833 PTPN12Q05209 780 aaKnown RBP18.83■□□□□ 0.6
CHD8-211ENST00000556833 CTU1Q7Z7A3 348 aaKnown RBP18.83■□□□□ 0.6
CHD8-211ENST00000556833 CERS5Q8N5B7 392 aa18.83■□□□□ 0.6
CHD8-211ENST00000556833 CD209Q9NNX6 404 aa18.83■□□□□ 0.6
CHD8-211ENST00000556833 HDAC9Q9UKV0 1011 aa18.83■□□□□ 0.6
CHD8-211ENST00000556833 SPINK5Q9NQ38 1064 aaPredicted RBP18.82■□□□□ 0.6
CHD8-211ENST00000556833 ANGEL1Q9UNK9 670 aaKnown RBP18.82■□□□□ 0.6
CHD8-211ENST00000556833 CLRN2A0PK11 232 aa18.81■□□□□ 0.6
CHD8-211ENST00000556833 FOXO4P98177 505 aa18.81■□□□□ 0.6
CHD8-211ENST00000556833 IFIT5Q13325 482 aaKnown RBP18.81■□□□□ 0.6
CHD8-211ENST00000556833 EPHA10Q5JZY3 1008 aa18.81■□□□□ 0.6
CHD8-211ENST00000556833 APOBEC3FQ8IUX4 373 aaKnown RBP18.81■□□□□ 0.6
CHD8-211ENST00000556833 ZNF296Q8WUU4 475 aaPredicted RBP18.81■□□□□ 0.6
CHD8-211ENST00000556833 AOX1Q06278 1338 aa18.8■□□□□ 0.6
CHD8-211ENST00000556833 DLGAP5Q15398 846 aa18.8■□□□□ 0.6
CHD8-211ENST00000556833 TAF7LQ5H9L4 462 aa18.8■□□□□ 0.6
CHD8-211ENST00000556833 LMBR1LQ6UX01 489 aa18.8■□□□□ 0.6
CHD8-211ENST00000556833 ARMC9Q7Z3E5 817 aa18.8■□□□□ 0.6
CHD8-211ENST00000556833 SLC4A10Q6U841 1118 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms