RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 SYT9Q86SS6 491 aa8.28□□□□□ -1.08
TMEM260-212ENST00000556810 ANKLE2Q86XL3 938 aa8.28□□□□□ -1.08
TMEM260-212ENST00000556810 HSH2DQ96JZ2 352 aa8.28□□□□□ -1.08
TMEM260-212ENST00000556810 ANKIB1Q9P2G1 1089 aa8.28□□□□□ -1.08
TMEM260-212ENST00000556810 EFCAB6Q5THR3 1501 aa8.28□□□□□ -1.08
TMEM260-212ENST00000556810 RALGAPBQ86X10 1494 aa8.27□□□□□ -1.09
TMEM260-212ENST00000556810 HSPA5P11021 654 aaKnown RBP8.27□□□□□ -1.09
TMEM260-212ENST00000556810 CRTC2Q53ET0 693 aaPredicted RBP8.27□□□□□ -1.09
TMEM260-212ENST00000556810 STAG2Q8N3U4 1231 aa8.27□□□□□ -1.09
TMEM260-212ENST00000556810 GAS2L2Q8NHY3 880 aa8.27□□□□□ -1.09
TMEM260-212ENST00000556810 SCG3Q8WXD2 468 aaKnown RBP8.27□□□□□ -1.09
TMEM260-212ENST00000556810 CEP63Q96MT8 703 aa8.27□□□□□ -1.09
TMEM260-212ENST00000556810 CARD11Q9BXL7 1154 aa8.27□□□□□ -1.09
TMEM260-212ENST00000556810 NOP53Q9NZM5 478 aaKnown RBP8.27□□□□□ -1.09
TMEM260-212ENST00000556810 MED1Q15648 1581 aaPredicted RBP8.27□□□□□ -1.09
TMEM260-212ENST00000556810 LAMC1P11047 1609 aa8.26□□□□□ -1.09
TMEM260-212ENST00000556810 TNRQ92752 1358 aa8.26□□□□□ -1.09
TMEM260-212ENST00000556810 ELOA3CA0A087WX78 387 aaPredicted RBP8.26□□□□□ -1.09
TMEM260-212ENST00000556810 LOC100996750A0A140TA64 210 aa8.26□□□□□ -1.09
TMEM260-212ENST00000556810 ELOA3DA6NLF2 546 aaPredicted RBP8.26□□□□□ -1.09
TMEM260-212ENST00000556810 SIN3BO75182 1162 aa8.26□□□□□ -1.09
TMEM260-212ENST00000556810 PTK7Q13308 1070 aa8.26□□□□□ -1.09
TMEM260-212ENST00000556810 RGL3Q3MIN7 710 aa8.26□□□□□ -1.09
TMEM260-212ENST00000556810 ELOA3BQ3SY89 546 aa8.26□□□□□ -1.09
TMEM260-212ENST00000556810 ZNF326Q5BKZ1 582 aaKnown RBP8.26□□□□□ -1.09
TMEM260-212ENST00000556810 THEMISQ8N1K5 641 aaPredicted RBP8.26□□□□□ -1.09
TMEM260-212ENST00000556810 ELOA3Q8NG57 546 aa8.26□□□□□ -1.09
TMEM260-212ENST00000556810 SUSD3Q96L08 255 aa8.26□□□□□ -1.09
TMEM260-212ENST00000556810 SLC30A3Q99726 388 aa8.26□□□□□ -1.09
TMEM260-212ENST00000556810 C2orf49Q9BVC5 232 aaPredicted RBP8.26□□□□□ -1.09
TMEM260-212ENST00000556810 KRTAP4-6Q9BYQ5 205 aa8.26□□□□□ -1.09
TMEM260-212ENST00000556810 BRD7Q9NPI1 651 aa8.26□□□□□ -1.09
TMEM260-212ENST00000556810 ARHGAP31Q2M1Z3 1444 aa8.26□□□□□ -1.09
TMEM260-212ENST00000556810 RPGRIP1LQ68CZ1 1315 aa8.26□□□□□ -1.09
TMEM260-212ENST00000556810 MROH1Q8NDA8 1641 aa8.25□□□□□ -1.09
TMEM260-212ENST00000556810 ROCK2O75116 1388 aaKnown RBP8.25□□□□□ -1.09
TMEM260-212ENST00000556810 CPS1P31327 1500 aa8.25□□□□□ -1.09
TMEM260-212ENST00000556810 DPYDQ12882 1025 aa8.25□□□□□ -1.09
TMEM260-212ENST00000556810 DDX10Q13206 875 aaKnown RBP8.25□□□□□ -1.09
TMEM260-212ENST00000556810 NBPF8Q3BBV2 869 aa8.25□□□□□ -1.09
TMEM260-212ENST00000556810 ALDH16A1Q8IZ83 802 aa8.25□□□□□ -1.09
TMEM260-212ENST00000556810 ZNF280CQ8ND82 737 aa8.25□□□□□ -1.09
TMEM260-212ENST00000556810 MDFIQ99750 246 aa8.25□□□□□ -1.09
TMEM260-212ENST00000556810 SLC52A1Q9NWF4 448 aa8.25□□□□□ -1.09
TMEM260-212ENST00000556810 KIAA1210Q9ULL0 1709 aa8.25□□□□□ -1.09
TMEM260-212ENST00000556810 TRPM1Q7Z4N2 1603 aa8.25□□□□□ -1.09
TMEM260-212ENST00000556810 FAM196BA6NMK8 535 aa8.24□□□□□ -1.09
TMEM260-212ENST00000556810 USP17L15C9J2P7 530 aa8.24□□□□□ -1.09
TMEM260-212ENST00000556810 USP17L10C9JJH3 530 aa8.24□□□□□ -1.09
TMEM260-212ENST00000556810 USP17L13C9JLJ4 530 aa8.24□□□□□ -1.09
TMEM260-212ENST00000556810 USP17L12C9JPN9 530 aa8.24□□□□□ -1.09
TMEM260-212ENST00000556810 USP17L11C9JVI0 530 aa8.24□□□□□ -1.09
TMEM260-212ENST00000556810 USP17L21D6R901 530 aa8.24□□□□□ -1.09
TMEM260-212ENST00000556810 USP17L18D6R9N7 530 aa8.24□□□□□ -1.09
TMEM260-212ENST00000556810 USP17L22D6RA61 530 aa8.24□□□□□ -1.09
TMEM260-212ENST00000556810 USP17L17D6RBQ6 530 aa8.24□□□□□ -1.09
TMEM260-212ENST00000556810 USP17L19D6RCP7 530 aa8.24□□□□□ -1.09
TMEM260-212ENST00000556810 USP17L20D6RJB6 530 aa8.24□□□□□ -1.09
TMEM260-212ENST00000556810 ALAS2P22557 587 aa8.24□□□□□ -1.09
TMEM260-212ENST00000556810 LMOD1P29536 600 aaPredicted RBP8.24□□□□□ -1.09
TMEM260-212ENST00000556810 KCNQ4P56696 695 aa8.24□□□□□ -1.09
TMEM260-212ENST00000556810 TYRO3Q06418 890 aa8.24□□□□□ -1.09
TMEM260-212ENST00000556810 SPEM2Q0P670 501 aa8.24□□□□□ -1.09
TMEM260-212ENST00000556810 USP17L24Q0WX57 530 aa8.24□□□□□ -1.09
TMEM260-212ENST00000556810 HINFPQ9BQA5 517 aa8.24□□□□□ -1.09
TMEM260-212ENST00000556810 C1orf115Q9H7X2 142 aa8.24□□□□□ -1.09
TMEM260-212ENST00000556810 CFAP65Q6ZU64 1925 aaKnown RBP8.23□□□□□ -1.09
TMEM260-212ENST00000556810 PRAG1Q86YV5 1406 aa8.23□□□□□ -1.09
TMEM260-212ENST00000556810 ADARB2-AS1A8MUL3 147 aa8.23□□□□□ -1.09
TMEM260-212ENST00000556810 CCER2I3L3R5 266 aa8.23□□□□□ -1.09
TMEM260-212ENST00000556810 HIF1AQ16665 826 aa8.23□□□□□ -1.09
TMEM260-212ENST00000556810 CDCA8Q53HL2 280 aa8.23□□□□□ -1.09
TMEM260-212ENST00000556810 ANKMY2Q8IV38 441 aa8.23□□□□□ -1.09
TMEM260-212ENST00000556810 NGLY1Q96IV0 654 aa8.23□□□□□ -1.09
TMEM260-212ENST00000556810 VRTNQ9H8Y1 702 aa8.23□□□□□ -1.09
TMEM260-212ENST00000556810 KCNH4Q9UQ05 1017 aa8.23□□□□□ -1.09
TMEM260-212ENST00000556810 ABCC3O15438 1527 aa8.23□□□□□ -1.09
TMEM260-212ENST00000556810 USP47Q96K76 1375 aa8.22□□□□□ -1.09
TMEM260-212ENST00000556810 CLTCL1P53675 1640 aa8.22□□□□□ -1.09
TMEM260-212ENST00000556810 NPHP4O75161 1426 aaPredicted RBP8.22□□□□□ -1.09
TMEM260-212ENST00000556810 SPATA31E1Q6ZUB1 1445 aa8.22□□□□□ -1.09
TMEM260-212ENST00000556810 TNFRSF25Q93038 417 aa8.22□□□□□ -1.09
TMEM260-212ENST00000556810 TRIM11Q96F44 468 aa8.22□□□□□ -1.09
TMEM260-212ENST00000556810 UGGT1Q9NYU2 1555 aa8.22□□□□□ -1.09
TMEM260-212ENST00000556810 EIF3AQ14152 1382 aaKnown RBP8.22□□□□□ -1.09
TMEM260-212ENST00000556810 ALKQ9UM73 1620 aa8.21□□□□□ -1.09
TMEM260-212ENST00000556810 MED14O60244 1454 aa8.21□□□□□ -1.09
TMEM260-212ENST00000556810 STRCP1A6NGW2 1772 aa8.21□□□□□ -1.1
TMEM260-212ENST00000556810 LGR5O75473 907 aa8.21□□□□□ -1.1
TMEM260-212ENST00000556810 IGFBP4P22692 258 aa8.21□□□□□ -1.1
TMEM260-212ENST00000556810 BTLAQ7Z6A9 289 aa8.21□□□□□ -1.1
TMEM260-212ENST00000556810 RAB44Q7Z6P3 723 aaPredicted RBP8.21□□□□□ -1.1
TMEM260-212ENST00000556810 GPRASP1Q5JY77 1395 aa8.21□□□□□ -1.1
TMEM260-212ENST00000556810 MYOM2P54296 1465 aa8.2□□□□□ -1.1
TMEM260-212ENST00000556810 NLRP1Q9C000 1473 aa8.2□□□□□ -1.1
TMEM260-212ENST00000556810 BAG6P46379 1132 aa8.2□□□□□ -1.1
TMEM260-212ENST00000556810 RTN1Q16799 776 aa8.2□□□□□ -1.1
TMEM260-212ENST00000556810 HIRIP3Q9BW71 556 aaPredicted RBP8.2□□□□□ -1.1
TMEM260-212ENST00000556810 PLVAPQ9BX97 442 aa8.2□□□□□ -1.1
TMEM260-212ENST00000556810 IQGAP1P46940 1657 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms