RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 KIF4AO95239 1232 aa8.19□□□□□ -1.1
PRPF39-210ENST00000556718 SCNN1AP37088 669 aa8.19□□□□□ -1.1
PRPF39-210ENST00000556718 NFIAQ12857 509 aa8.19□□□□□ -1.1
PRPF39-210ENST00000556718 TTC39BQ5VTQ0 682 aaPredicted RBP8.19□□□□□ -1.1
PRPF39-210ENST00000556718 COL26A1Q96A83 441 aa8.19□□□□□ -1.1
PRPF39-210ENST00000556718 CEP41Q9BYV8 373 aa8.19□□□□□ -1.1
PRPF39-210ENST00000556718 CXXC1Q9P0U4 656 aaPredicted RBP8.19□□□□□ -1.1
PRPF39-210ENST00000556718 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.19□□□□□ -1.1
PRPF39-210ENST00000556718 BTBD11A6QL63 1104 aa8.18□□□□□ -1.1
PRPF39-210ENST00000556718 IRAK1P51617 712 aa8.18□□□□□ -1.1
PRPF39-210ENST00000556718 GP2P55259 537 aaKnown RBP8.18□□□□□ -1.1
PRPF39-210ENST00000556718 KLHDC7BQ96G42 594 aa8.18□□□□□ -1.1
PRPF39-210ENST00000556718 PAX4O43316 350 aa8.17□□□□□ -1.1
PRPF39-210ENST00000556718 TAL1P17542 331 aaPredicted RBP8.17□□□□□ -1.1
PRPF39-210ENST00000556718 ELOAQ14241 798 aaKnown RBP8.17□□□□□ -1.1
PRPF39-210ENST00000556718 DUOXA2Q1HG44 320 aa8.17□□□□□ -1.1
PRPF39-210ENST00000556718 CEP120Q8N960 986 aa8.17□□□□□ -1.1
PRPF39-210ENST00000556718 POP1Q99575 1024 aaKnown RBP8.17□□□□□ -1.1
PRPF39-210ENST00000556718 PBX4Q9BYU1 374 aa8.17□□□□□ -1.1
PRPF39-210ENST00000556718 ZMYND15Q9H091 742 aa8.17□□□□□ -1.1
PRPF39-210ENST00000556718 ABI2Q9NYB9 513 aaPredicted RBP8.17□□□□□ -1.1
PRPF39-210ENST00000556718 FAM13BQ9NYF5 915 aa8.17□□□□□ -1.1
PRPF39-210ENST00000556718 PRR19A6NJB7 356 aa8.16□□□□□ -1.1
PRPF39-210ENST00000556718 ACPPP15309 386 aa8.16□□□□□ -1.1
PRPF39-210ENST00000556718 SPINK2P20155 84 aa8.16□□□□□ -1.1
PRPF39-210ENST00000556718 RNF43Q68DV7 783 aa8.16□□□□□ -1.1
PRPF39-210ENST00000556718 KLHL23Q8NBE8 558 aa8.16□□□□□ -1.1
PRPF39-210ENST00000556718 MYRFLQ96LU7 910 aa8.16□□□□□ -1.1
PRPF39-210ENST00000556718 SRPK2P78362 688 aaKnown RBP8.15□□□□□ -1.1
PRPF39-210ENST00000556718 UVSSAQ2YD98 709 aa8.15□□□□□ -1.1
PRPF39-210ENST00000556718 FMNL2Q96PY5 1086 aa8.15□□□□□ -1.1
PRPF39-210ENST00000556718 TMEM63CQ9P1W3 806 aa8.15□□□□□ -1.1
PRPF39-210ENST00000556718 STIM2Q9P246 746 aa8.15□□□□□ -1.1
PRPF39-210ENST00000556718 KANSL3Q9P2N6 904 aa8.15□□□□□ -1.1
PRPF39-210ENST00000556718 FNDC3AQ9Y2H6 1198 aaKnown RBP8.15□□□□□ -1.1
PRPF39-210ENST00000556718 FAM117BQ6P1L5 589 aa8.14□□□□□ -1.11
PRPF39-210ENST00000556718 NCAPG2Q86XI2 1143 aa8.14□□□□□ -1.11
PRPF39-210ENST00000556718 DBNDD2Q9BQY9 259 aa8.14□□□□□ -1.11
PRPF39-210ENST00000556718 ADAM19Q9H013 955 aa8.14□□□□□ -1.11
PRPF39-210ENST00000556718 SEC31BQ9NQW1 1179 aa8.14□□□□□ -1.11
PRPF39-210ENST00000556718 CNTN3Q9P232 1028 aa8.14□□□□□ -1.11
PRPF39-210ENST00000556718 SLAIN2Q9P270 581 aa8.14□□□□□ -1.11
PRPF39-210ENST00000556718 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.13□□□□□ -1.11
PRPF39-210ENST00000556718 KRTAP4-8A0A0G2JLE6 195 aa8.13□□□□□ -1.11
PRPF39-210ENST00000556718 PTPRAP18433 802 aa8.13□□□□□ -1.11
PRPF39-210ENST00000556718 TMEM164Q5U3C3 297 aa8.13□□□□□ -1.11
PRPF39-210ENST00000556718 ATCAYQ86WG3 371 aa8.13□□□□□ -1.11
PRPF39-210ENST00000556718 FAM20CQ8IXL6 584 aa8.13□□□□□ -1.11
PRPF39-210ENST00000556718 ELP3Q9H9T3 547 aa8.13□□□□□ -1.11
PRPF39-210ENST00000556718 TRPA1O75762 1119 aa8.12□□□□□ -1.11
PRPF39-210ENST00000556718 PREPP48147 710 aa8.12□□□□□ -1.11
PRPF39-210ENST00000556718 SHKBP1Q8TBC3 707 aa8.12□□□□□ -1.11
PRPF39-210ENST00000556718 NUDT16Q96DE0 195 aaKnown RBP8.12□□□□□ -1.11
PRPF39-210ENST00000556718 H3BRJ5 948 aa8.11□□□□□ -1.11
PRPF39-210ENST00000556718 NFKBIEO00221 500 aa8.11□□□□□ -1.11
PRPF39-210ENST00000556718 BMP3P12645 472 aa8.11□□□□□ -1.11
PRPF39-210ENST00000556718 NLRP12P59046 1061 aa8.11□□□□□ -1.11
PRPF39-210ENST00000556718 HGSNATQ68CP4 663 aa8.11□□□□□ -1.11
PRPF39-210ENST00000556718 INTS5Q6P9B9 1019 aaKnown RBP8.11□□□□□ -1.11
PRPF39-210ENST00000556718 BEND4Q6ZU67 534 aa8.11□□□□□ -1.11
PRPF39-210ENST00000556718 DTX1Q86Y01 620 aa8.11□□□□□ -1.11
PRPF39-210ENST00000556718 CLEC10AQ8IUN9 316 aa8.11□□□□□ -1.11
PRPF39-210ENST00000556718 HHIPQ96QV1 700 aa8.11□□□□□ -1.11
PRPF39-210ENST00000556718 FAM83CQ9BQN1 747 aa8.11□□□□□ -1.11
PRPF39-210ENST00000556718 KCNF1Q9H3M0 494 aa8.11□□□□□ -1.11
PRPF39-210ENST00000556718 SEPT3Q9UH03 358 aa8.11□□□□□ -1.11
PRPF39-210ENST00000556718 GRIK1P39086 918 aa8.1□□□□□ -1.11
PRPF39-210ENST00000556718 TXKP42681 527 aa8.1□□□□□ -1.11
PRPF39-210ENST00000556718 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.1□□□□□ -1.11
PRPF39-210ENST00000556718 C1orf127Q8N9H9 656 aa8.1□□□□□ -1.11
PRPF39-210ENST00000556718 SALL4Q9UJQ4 1053 aa8.1□□□□□ -1.11
PRPF39-210ENST00000556718 SART1O43290 800 aaKnown RBP8.09□□□□□ -1.11
PRPF39-210ENST00000556718 HOXA10P31260 410 aaPredicted RBP8.09□□□□□ -1.11
PRPF39-210ENST00000556718 PDE12Q6L8Q7 609 aaKnown RBP8.09□□□□□ -1.11
PRPF39-210ENST00000556718 ABTB2Q8N961 1025 aa8.09□□□□□ -1.11
PRPF39-210ENST00000556718 SLC7A3Q8WY07 619 aa8.09□□□□□ -1.11
PRPF39-210ENST00000556718 CLP1Q92989 425 aaKnown RBP8.09□□□□□ -1.11
PRPF39-210ENST00000556718 A6NHS1 94 aa8.08□□□□□ -1.12
PRPF39-210ENST00000556718 WDR64B1ANS9 1081 aa8.08□□□□□ -1.12
PRPF39-210ENST00000556718 ATG7O95352 703 aa8.08□□□□□ -1.12
PRPF39-210ENST00000556718 PIP4K2BP78356 416 aa8.08□□□□□ -1.12
PRPF39-210ENST00000556718 ANKRD34AQ69YU3 496 aa8.08□□□□□ -1.12
PRPF39-210ENST00000556718 ZNF438Q7Z4V0 828 aa8.08□□□□□ -1.12
PRPF39-210ENST00000556718 RUSC1Q9BVN2 902 aa8.08□□□□□ -1.12
PRPF39-210ENST00000556718 OSGEPQ9NPF4 335 aa8.08□□□□□ -1.12
PRPF39-210ENST00000556718 RNF114Q9Y508 228 aa8.08□□□□□ -1.12
PRPF39-210ENST00000556718 FAM177BA6PVY3 158 aa8.07□□□□□ -1.12
PRPF39-210ENST00000556718 RNF208Q9H0X6 261 aa8.07□□□□□ -1.12
PRPF39-210ENST00000556718 GGNBP2Q9H3C7 697 aa8.07□□□□□ -1.12
PRPF39-210ENST00000556718 DZANK1Q9NVP4 752 aa8.07□□□□□ -1.12
PRPF39-210ENST00000556718 PDE2AO00408 941 aaPredicted RBP8.06□□□□□ -1.12
PRPF39-210ENST00000556718 WNT11O96014 354 aa8.06□□□□□ -1.12
PRPF39-210ENST00000556718 CABP4P57796 275 aa8.06□□□□□ -1.12
PRPF39-210ENST00000556718 EDEM1Q92611 657 aa8.06□□□□□ -1.12
PRPF39-210ENST00000556718 WNT8BQ93098 351 aa8.06□□□□□ -1.12
PRPF39-210ENST00000556718 MFSD14AQ96MC6 490 aa8.06□□□□□ -1.12
PRPF39-210ENST00000556718 SOX13Q9UN79 622 aa8.06□□□□□ -1.12
PRPF39-210ENST00000556718 CES1P23141 567 aa8.05□□□□□ -1.12
PRPF39-210ENST00000556718 SGO2Q562F6 1265 aa8.05□□□□□ -1.12
PRPF39-210ENST00000556718 FDX2Q6P4F2 183 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms