RNA–Protein interactions for RNA: ENST00000556496.2

NRXN3-213, Transcript of neurexin 3, humanhuman

TSL 1 (best)

Gene NRXN3, Length 2,737 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3-213ENST00000556496 HCLS1P14317 486 aaPredicted RBP12.48□□□□□ -0.41
NRXN3-213ENST00000556496 IFFO2Q5TF58 517 aa12.48□□□□□ -0.41
NRXN3-213ENST00000556496 CHST3Q7LGC8 479 aa12.48□□□□□ -0.41
NRXN3-213ENST00000556496 SCAND2PQ9GZW5 306 aaPredicted RBP12.48□□□□□ -0.41
NRXN3-213ENST00000556496 ELP1O95163 1332 aa12.48□□□□□ -0.41
NRXN3-213ENST00000556496 DZIP3Q86Y13 1208 aaKnown RBP12.48□□□□□ -0.41
NRXN3-213ENST00000556496 NAP1L2Q9ULW6 460 aaPredicted RBP12.48□□□□□ -0.41
NRXN3-213ENST00000556496 RIC1Q4ADV7 1423 aa12.48□□□□□ -0.41
NRXN3-213ENST00000556496 A0A0G2JS52 829 aa12.47□□□□□ -0.41
NRXN3-213ENST00000556496 SPATA32Q96LK8 384 aa12.47□□□□□ -0.41
NRXN3-213ENST00000556496 LLPHQ9BRT6 129 aaKnown RBP12.47□□□□□ -0.41
NRXN3-213ENST00000556496 AGXT2Q9BYV1 514 aa12.47□□□□□ -0.41
NRXN3-213ENST00000556496 IL6STP40189 918 aaPredicted RBP12.47□□□□□ -0.41
NRXN3-213ENST00000556496 CCT2P78371 535 aaKnown RBP12.47□□□□□ -0.41
NRXN3-213ENST00000556496 SMARCC2Q8TAQ2 1214 aa12.47□□□□□ -0.41
NRXN3-213ENST00000556496 APPBP2Q92624 585 aa12.47□□□□□ -0.41
NRXN3-213ENST00000556496 CTNNA3Q9UI47 895 aa12.47□□□□□ -0.41
NRXN3-213ENST00000556496 NOL7Q9UMY1 257 aaKnown RBP12.47□□□□□ -0.41
NRXN3-213ENST00000556496 GOLGA6L4A6NEF3 574 aa12.46□□□□□ -0.41
NRXN3-213ENST00000556496 ERVV-1B6SEH8 477 aa12.46□□□□□ -0.41
NRXN3-213ENST00000556496 FOXP2O15409 715 aa12.46□□□□□ -0.41
NRXN3-213ENST00000556496 MCAMP43121 646 aa12.46□□□□□ -0.41
NRXN3-213ENST00000556496 HAND2P61296 217 aa12.46□□□□□ -0.41
NRXN3-213ENST00000556496 NSUN7Q8NE18 718 aaKnown RBP12.46□□□□□ -0.41
NRXN3-213ENST00000556496 NAP1L5Q96NT1 182 aaPredicted RBP12.46□□□□□ -0.41
NRXN3-213ENST00000556496 PUS7LQ9H0K6 701 aaKnown RBP12.46□□□□□ -0.41
NRXN3-213ENST00000556496 ITGB4P16144 1822 aa12.46□□□□□ -0.41
NRXN3-213ENST00000556496 SPEF2Q9C093 1822 aa12.46□□□□□ -0.41
NRXN3-213ENST00000556496 PDE8AO60658 829 aa12.46□□□□□ -0.41
NRXN3-213ENST00000556496 FGAP02671 866 aa12.46□□□□□ -0.41
NRXN3-213ENST00000556496 IMMTQ16891 758 aaKnown RBP12.46□□□□□ -0.41
NRXN3-213ENST00000556496 UVSSAQ2YD98 709 aa12.46□□□□□ -0.41
NRXN3-213ENST00000556496 LEO1Q8WVC0 666 aaPredicted RBP12.46□□□□□ -0.41
NRXN3-213ENST00000556496 NCOA5Q9HCD5 579 aaKnown RBP12.46□□□□□ -0.41
NRXN3-213ENST00000556496 UBN2Q6ZU65 1347 aa12.46□□□□□ -0.42
NRXN3-213ENST00000556496 COL14A1Q05707 1796 aaKnown RBP12.46□□□□□ -0.42
NRXN3-213ENST00000556496 PTPDC1A2A3K4 754 aa12.46□□□□□ -0.42
NRXN3-213ENST00000556496 CTDNEP1O95476 244 aa12.46□□□□□ -0.42
NRXN3-213ENST00000556496 LIG1P18858 919 aa12.46□□□□□ -0.42
NRXN3-213ENST00000556496 RESTQ13127 1097 aa12.46□□□□□ -0.42
NRXN3-213ENST00000556496 FUCA2Q9BTY2 467 aa12.46□□□□□ -0.42
NRXN3-213ENST00000556496 CCDC39Q9UFE4 941 aa12.46□□□□□ -0.42
NRXN3-213ENST00000556496 ABCC12Q96J65 1359 aa12.45□□□□□ -0.42
NRXN3-213ENST00000556496 PPFIA3O75145 1194 aa12.45□□□□□ -0.42
NRXN3-213ENST00000556496 PDE8BO95263 885 aa12.45□□□□□ -0.42
NRXN3-213ENST00000556496 PDIA3P30101 505 aaKnown RBP12.45□□□□□ -0.42
NRXN3-213ENST00000556496 FOSBP53539 338 aa12.45□□□□□ -0.42
NRXN3-213ENST00000556496 HMGN5P82970 282 aaKnown RBP12.45□□□□□ -0.42
NRXN3-213ENST00000556496 VGLL2Q8N8G2 317 aa12.45□□□□□ -0.42
NRXN3-213ENST00000556496 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.45□□□□□ -0.42
NRXN3-213ENST00000556496 ZSCAN16Q9H4T2 348 aaPredicted RBP12.45□□□□□ -0.42
NRXN3-213ENST00000556496 USP25Q9UHP3 1055 aa12.45□□□□□ -0.42
NRXN3-213ENST00000556496 LRP6O75581 1613 aa12.45□□□□□ -0.42
NRXN3-213ENST00000556496 GPAA1O43292 621 aa12.45□□□□□ -0.42
NRXN3-213ENST00000556496 ADAMTS2O95450 1211 aa12.45□□□□□ -0.42
NRXN3-213ENST00000556496 ZNF34Q8IZ26 560 aa12.45□□□□□ -0.42
NRXN3-213ENST00000556496 PTMAP06454 111 aaKnown RBP12.44□□□□□ -0.42
NRXN3-213ENST00000556496 CAMK4Q16566 473 aa12.44□□□□□ -0.42
NRXN3-213ENST00000556496 KLHL34Q8N239 644 aa12.44□□□□□ -0.42
NRXN3-213ENST00000556496 ZNF274Q96GC6 653 aaPredicted RBP12.44□□□□□ -0.42
NRXN3-213ENST00000556496 NUP62CLQ9H1M0 184 aa12.44□□□□□ -0.42
NRXN3-213ENST00000556496 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.44□□□□□ -0.42
NRXN3-213ENST00000556496 KIF3AQ9Y496 699 aa12.44□□□□□ -0.42
NRXN3-213ENST00000556496 SLC9C2Q5TAH2 1124 aa12.44□□□□□ -0.42
NRXN3-213ENST00000556496 GPHNQ9NQX3 736 aaPredicted RBP12.44□□□□□ -0.42
NRXN3-213ENST00000556496 DACT1Q9NYF0 836 aa12.44□□□□□ -0.42
NRXN3-213ENST00000556496 ZKSCAN5Q9Y2L8 839 aa12.44□□□□□ -0.42
NRXN3-213ENST00000556496 FAM177BA6PVY3 158 aa12.43□□□□□ -0.42
NRXN3-213ENST00000556496 CCDC192P0DO97 292 aa12.43□□□□□ -0.42
NRXN3-213ENST00000556496 DDB1Q16531 1140 aa12.43□□□□□ -0.42
NRXN3-213ENST00000556496 MAP3K11Q16584 847 aa12.43□□□□□ -0.42
NRXN3-213ENST00000556496 NAA16Q6N069 864 aaPredicted RBP12.43□□□□□ -0.42
NRXN3-213ENST00000556496 ACSBG1Q96GR2 724 aa12.43□□□□□ -0.42
NRXN3-213ENST00000556496 IDH1O75874 414 aaKnown RBP12.43□□□□□ -0.42
NRXN3-213ENST00000556496 PHKA1P46020 1223 aa12.43□□□□□ -0.42
NRXN3-213ENST00000556496 EIF5P55010 431 aaKnown RBP12.43□□□□□ -0.42
NRXN3-213ENST00000556496 CCDC102BQ68D86 513 aa12.43□□□□□ -0.42
NRXN3-213ENST00000556496 ZSCAN25Q6NSZ9 544 aa12.43□□□□□ -0.42
NRXN3-213ENST00000556496 HELBQ8NG08 1087 aaPredicted RBP12.43□□□□□ -0.42
NRXN3-213ENST00000556496 ZNF512BQ96KM6 892 aaPredicted RBP12.43□□□□□ -0.42
NRXN3-213ENST00000556496 CFAP45Q9UL16 551 aa12.43□□□□□ -0.42
NRXN3-213ENST00000556496 ZNF213O14771 459 aa12.42□□□□□ -0.42
NRXN3-213ENST00000556496 ADD2P35612 726 aa12.42□□□□□ -0.42
NRXN3-213ENST00000556496 ATP6V1AP38606 617 aa12.42□□□□□ -0.42
NRXN3-213ENST00000556496 CEBPZQ03701 1054 aaKnown RBP12.42□□□□□ -0.42
NRXN3-213ENST00000556496 TTF1Q15361 905 aaPredicted RBP12.42□□□□□ -0.42
NRXN3-213ENST00000556496 FBXL16Q8N461 479 aa12.42□□□□□ -0.42
NRXN3-213ENST00000556496 BICD2Q8TD16 824 aa12.42□□□□□ -0.42
NRXN3-213ENST00000556496 PGBD1Q96JS3 809 aa12.42□□□□□ -0.42
NRXN3-213ENST00000556496 CDCA7Q9BWT1 371 aaPredicted RBP12.42□□□□□ -0.42
NRXN3-213ENST00000556496 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.42□□□□□ -0.42
NRXN3-213ENST00000556496 PRC1O43663 620 aa12.42□□□□□ -0.42
NRXN3-213ENST00000556496 ADCY5O95622 1261 aa12.42□□□□□ -0.42
NRXN3-213ENST00000556496 MCM5P33992 734 aa12.42□□□□□ -0.42
NRXN3-213ENST00000556496 PUM3Q15397 648 aaKnown RBP12.42□□□□□ -0.42
NRXN3-213ENST00000556496 SUSD4Q5VX71 490 aa12.42□□□□□ -0.42
NRXN3-213ENST00000556496 INTS5Q6P9B9 1019 aaKnown RBP12.42□□□□□ -0.42
NRXN3-213ENST00000556496 RALYLQ86SE5 291 aaKnown RBP12.42□□□□□ -0.42
NRXN3-213ENST00000556496 CHMP4CQ96CF2 233 aa12.42□□□□□ -0.42
NRXN3-213ENST00000556496 TNMDQ9H2S6 317 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms