RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 KANSL3Q9P2N6 904 aa7.75□□□□□ -1.17
SRP54-211ENST00000556445 CADPSQ9ULU8 1353 aa7.74□□□□□ -1.17
SRP54-211ENST00000556445 DEAF1O75398 565 aaPredicted RBP7.74□□□□□ -1.17
SRP54-211ENST00000556445 USP5P45974 858 aa7.74□□□□□ -1.17
SRP54-211ENST00000556445 GDF6Q6KF10 455 aaPredicted RBP7.74□□□□□ -1.17
SRP54-211ENST00000556445 ADAMTSL4Q6UY14 1074 aa7.74□□□□□ -1.17
SRP54-211ENST00000556445 FBXO11Q86XK2 927 aa7.74□□□□□ -1.17
SRP54-211ENST00000556445 FAM9AQ8IZU1 332 aaPredicted RBP7.74□□□□□ -1.17
SRP54-211ENST00000556445 NACC1Q96RE7 527 aa7.74□□□□□ -1.17
SRP54-211ENST00000556445 RASSF4Q9H2L5 321 aa7.74□□□□□ -1.17
SRP54-211ENST00000556445 SALL4Q9UJQ4 1053 aa7.74□□□□□ -1.17
SRP54-211ENST00000556445 TOP2BQ02880 1626 aa7.74□□□□□ -1.17
SRP54-211ENST00000556445 ARHGAP4P98171 946 aa7.73□□□□□ -1.17
SRP54-211ENST00000556445 SHISA2Q6UWI4 295 aa7.73□□□□□ -1.17
SRP54-211ENST00000556445 NCAPG2Q86XI2 1143 aa7.73□□□□□ -1.17
SRP54-211ENST00000556445 GLYCTKQ8IVS8 523 aa7.73□□□□□ -1.17
SRP54-211ENST00000556445 IL22RA1Q8N6P7 574 aa7.73□□□□□ -1.17
SRP54-211ENST00000556445 TTC16Q8NEE8 873 aa7.73□□□□□ -1.17
SRP54-211ENST00000556445 SPACA7Q96KW9 195 aa7.73□□□□□ -1.17
SRP54-211ENST00000556445 BIVM-ERCC5R4GMW8 1640 aa7.73□□□□□ -1.17
SRP54-211ENST00000556445 TNFRSF21O75509 655 aa7.72□□□□□ -1.17
SRP54-211ENST00000556445 ACPPP15309 386 aa7.72□□□□□ -1.17
SRP54-211ENST00000556445 CES1P23141 567 aa7.72□□□□□ -1.17
SRP54-211ENST00000556445 GATA4P43694 442 aa7.72□□□□□ -1.17
SRP54-211ENST00000556445 EHHADHQ08426 723 aa7.72□□□□□ -1.17
SRP54-211ENST00000556445 ADGRE1Q14246 886 aa7.72□□□□□ -1.17
SRP54-211ENST00000556445 CEP135Q66GS9 1140 aa7.72□□□□□ -1.17
SRP54-211ENST00000556445 LENG1Q96BZ8 264 aaPredicted RBP7.72□□□□□ -1.17
SRP54-211ENST00000556445 PBX4Q9BYU1 374 aa7.72□□□□□ -1.17
SRP54-211ENST00000556445 SYNJ1O43426 1573 aa7.71□□□□□ -1.17
SRP54-211ENST00000556445 C9orf172C9J069 976 aa7.71□□□□□ -1.18
SRP54-211ENST00000556445 MBTPS1Q14703 1052 aa7.71□□□□□ -1.18
SRP54-211ENST00000556445 CACTIN-AS1Q8N1I8 211 aa7.71□□□□□ -1.18
SRP54-211ENST00000556445 FOXD3Q9UJU5 478 aaPredicted RBP7.71□□□□□ -1.18
SRP54-211ENST00000556445 NFKBIEO00221 500 aa7.7□□□□□ -1.18
SRP54-211ENST00000556445 DLL1O00548 723 aa7.7□□□□□ -1.18
SRP54-211ENST00000556445 EREGO14944 169 aa7.7□□□□□ -1.18
SRP54-211ENST00000556445 SMNDC1O75940 238 aaKnown RBP eCLIP7.7□□□□□ -1.18
SRP54-211ENST00000556445 SUZ12Q15022 739 aaKnown RBP7.7□□□□□ -1.18
SRP54-211ENST00000556445 SNX29Q8TEQ0 813 aa7.7□□□□□ -1.18
SRP54-211ENST00000556445 PHACTR2O75167 634 aa7.69□□□□□ -1.18
SRP54-211ENST00000556445 BRD1O95696 1058 aa7.69□□□□□ -1.18
SRP54-211ENST00000556445 HSP90B1P14625 803 aaKnown RBP7.69□□□□□ -1.18
SRP54-211ENST00000556445 CDK11BP21127 795 aaKnown RBP7.69□□□□□ -1.18
SRP54-211ENST00000556445 DOC2BQ14184 412 aa7.69□□□□□ -1.18
SRP54-211ENST00000556445 SETDB1Q15047 1291 aa7.69□□□□□ -1.18
SRP54-211ENST00000556445 CCER1Q8TC90 406 aaPredicted RBP7.69□□□□□ -1.18
SRP54-211ENST00000556445 PMEPA1Q969W9 287 aa7.69□□□□□ -1.18
SRP54-211ENST00000556445 POP1Q99575 1024 aaKnown RBP7.69□□□□□ -1.18
SRP54-211ENST00000556445 LACRTQ9GZZ8 138 aa7.69□□□□□ -1.18
SRP54-211ENST00000556445 DZANK1Q9NVP4 752 aa7.69□□□□□ -1.18
SRP54-211ENST00000556445 CDK11AQ9UQ88 783 aaPredicted RBP7.69□□□□□ -1.18
SRP54-211ENST00000556445 GNEQ9Y223 722 aaKnown RBP7.69□□□□□ -1.18
SRP54-211ENST00000556445 TM4SF5O14894 197 aa7.68□□□□□ -1.18
SRP54-211ENST00000556445 ADAM23O75077 832 aa7.68□□□□□ -1.18
SRP54-211ENST00000556445 FURINP09958 794 aa7.68□□□□□ -1.18
SRP54-211ENST00000556445 CDC27P30260 824 aa7.68□□□□□ -1.18
SRP54-211ENST00000556445 NRG1Q02297 640 aaPredicted RBP7.68□□□□□ -1.18
SRP54-211ENST00000556445 HHIPQ96QV1 700 aa7.68□□□□□ -1.18
SRP54-211ENST00000556445 ADAM19Q9H013 955 aa7.68□□□□□ -1.18
SRP54-211ENST00000556445 MUC3BQ9H195 1237 aa7.68□□□□□ -1.18
SRP54-211ENST00000556445 SRA1Q9HD15 236 aaKnown RBP7.68□□□□□ -1.18
SRP54-211ENST00000556445 BRPF3Q9ULD4 1205 aa7.68□□□□□ -1.18
SRP54-211ENST00000556445 PPME1Q9Y570 386 aa7.68□□□□□ -1.18
SRP54-211ENST00000556445 LAMC3Q9Y6N6 1575 aa7.67□□□□□ -1.18
SRP54-211ENST00000556445 TRPA1O75762 1119 aa7.67□□□□□ -1.18
SRP54-211ENST00000556445 IGF2-ASQ6U949 168 aa7.67□□□□□ -1.18
SRP54-211ENST00000556445 TXNRD3Q86VQ6 643 aa7.67□□□□□ -1.18
SRP54-211ENST00000556445 MAP4K3Q8IVH8 894 aa7.67□□□□□ -1.18
SRP54-211ENST00000556445 ZFYVE28Q9HCC9 887 aa7.67□□□□□ -1.18
SRP54-211ENST00000556445 SH2B1Q9NRF2 756 aaPredicted RBP7.67□□□□□ -1.18
SRP54-211ENST00000556445 TPSG1Q9NRR2 321 aa7.67□□□□□ -1.18
SRP54-211ENST00000556445 SOGA1O94964 1423 aa7.67□□□□□ -1.18
SRP54-211ENST00000556445 CEP164Q9UPV0 1460 aa7.67□□□□□ -1.18
SRP54-211ENST00000556445 SOWAHDA6NJG2 315 aa7.66□□□□□ -1.18
SRP54-211ENST00000556445 IGHA2P01877 340 aa7.66□□□□□ -1.18
SRP54-211ENST00000556445 PTPRAP18433 802 aa7.66□□□□□ -1.18
SRP54-211ENST00000556445 EPHA1P21709 976 aa7.66□□□□□ -1.18
SRP54-211ENST00000556445 TMCO4Q5TGY1 634 aa7.66□□□□□ -1.18
SRP54-211ENST00000556445 TXNDC11Q6PKC3 985 aa7.66□□□□□ -1.18
SRP54-211ENST00000556445 PUS7Q96PZ0 661 aaKnown RBP7.66□□□□□ -1.18
SRP54-211ENST00000556445 FAM129BQ96TA1 746 aa7.66□□□□□ -1.18
SRP54-211ENST00000556445 ZKSCAN3Q9BRR0 538 aa7.66□□□□□ -1.18
SRP54-211ENST00000556445 USP21Q9UK80 565 aa7.66□□□□□ -1.18
SRP54-211ENST00000556445 TNIKQ9UKE5 1360 aa7.66□□□□□ -1.18
SRP54-211ENST00000556445 GOLGA3Q08378 1498 aa7.66□□□□□ -1.18
SRP54-211ENST00000556445 KIF21BO75037 1637 aa7.66□□□□□ -1.18
SRP54-211ENST00000556445 LINC01387J3KSC0 135 aa7.65□□□□□ -1.18
SRP54-211ENST00000556445 K7ELQ4 463 aaPredicted RBP7.65□□□□□ -1.18
SRP54-211ENST00000556445 PDE2AO00408 941 aaPredicted RBP7.65□□□□□ -1.18
SRP54-211ENST00000556445 NDUFB5O43674 189 aa7.65□□□□□ -1.18
SRP54-211ENST00000556445 CUX1P39880 1505 aa7.65□□□□□ -1.18
SRP54-211ENST00000556445 PEAR1Q5VY43 1037 aaPredicted RBP7.65□□□□□ -1.18
SRP54-211ENST00000556445 AEBP1Q8IUX7 1158 aa7.65□□□□□ -1.18
SRP54-211ENST00000556445 TMEM102Q8N9M5 508 aaPredicted RBP7.65□□□□□ -1.18
SRP54-211ENST00000556445 GALNT11Q8NCW6 608 aa7.65□□□□□ -1.18
SRP54-211ENST00000556445 OSMRQ99650 979 aa7.65□□□□□ -1.18
SRP54-211ENST00000556445 SSBP4Q9BWG4 385 aaPredicted RBP7.65□□□□□ -1.18
SRP54-211ENST00000556445 LATS2Q9NRM7 1088 aa7.65□□□□□ -1.18
SRP54-211ENST00000556445 AMOTL2Q9Y2J4 779 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms