RNA–Protein interactions for RNA: ENST00000556360.1

PCNX4-212, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-212ENST00000556360 SALL4Q9UJQ4 1053 aa9.08□□□□□ -0.96
PCNX4-212ENST00000556360 SERPINA10Q9UK55 444 aa9.08□□□□□ -0.96
PCNX4-212ENST00000556360 NFKBIEO00221 500 aa9.07□□□□□ -0.96
PCNX4-212ENST00000556360 IGLV1-40P01703 118 aa9.07□□□□□ -0.96
PCNX4-212ENST00000556360 NCAPG2Q86XI2 1143 aa9.07□□□□□ -0.96
PCNX4-212ENST00000556360 CNTN3Q9P232 1028 aa9.07□□□□□ -0.96
PCNX4-212ENST00000556360 DHX15O43143 795 aaKnown RBP9.06□□□□□ -0.96
PCNX4-212ENST00000556360 ADAM11O75078 769 aa9.06□□□□□ -0.96
PCNX4-212ENST00000556360 FAM117BQ6P1L5 589 aa9.06□□□□□ -0.96
PCNX4-212ENST00000556360 ZNF438Q7Z4V0 828 aa9.06□□□□□ -0.96
PCNX4-212ENST00000556360 ATCAYQ86WG3 371 aa9.06□□□□□ -0.96
PCNX4-212ENST00000556360 FOXD4L4Q8WXT5 416 aaPredicted RBP9.06□□□□□ -0.96
PCNX4-212ENST00000556360 CARD10Q9BWT7 1032 aa9.06□□□□□ -0.96
PCNX4-212ENST00000556360 STOML1Q9UBI4 398 aa9.06□□□□□ -0.96
PCNX4-212ENST00000556360 KIAA1324LA8MWY0 1029 aaPredicted RBP9.05□□□□□ -0.96
PCNX4-212ENST00000556360 H3BRJ5 948 aa9.05□□□□□ -0.96
PCNX4-212ENST00000556360 PIP4K2BP78356 416 aa9.05□□□□□ -0.96
PCNX4-212ENST00000556360 CCDC97Q96F63 343 aaPredicted RBP9.05□□□□□ -0.96
PCNX4-212ENST00000556360 OSGEPQ9NPF4 335 aa9.05□□□□□ -0.96
PCNX4-212ENST00000556360 SEC31BQ9NQW1 1179 aa9.05□□□□□ -0.96
PCNX4-212ENST00000556360 SH2B1Q9NRF2 756 aaPredicted RBP9.05□□□□□ -0.96
PCNX4-212ENST00000556360 KLHDC7BQ96G42 594 aa9.04□□□□□ -0.96
PCNX4-212ENST00000556360 PCMTD2Q9NV79 361 aa9.04□□□□□ -0.96
PCNX4-212ENST00000556360 DZANK1Q9NVP4 752 aa9.04□□□□□ -0.96
PCNX4-212ENST00000556360 KANSL3Q9P2N6 904 aa9.04□□□□□ -0.96
PCNX4-212ENST00000556360 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.04□□□□□ -0.96
PCNX4-212ENST00000556360 PDGFAP04085 211 aa9.03□□□□□ -0.96
PCNX4-212ENST00000556360 DUOXA2Q1HG44 320 aa9.03□□□□□ -0.96
PCNX4-212ENST00000556360 ZDHHC13Q8IUH4 622 aa9.03□□□□□ -0.96
PCNX4-212ENST00000556360 C1orf127Q8N9H9 656 aa9.03□□□□□ -0.96
PCNX4-212ENST00000556360 UBASH3BQ8TF42 649 aa9.03□□□□□ -0.96
PCNX4-212ENST00000556360 EDEM1Q92611 657 aa9.03□□□□□ -0.96
PCNX4-212ENST00000556360 MYRFLQ96LU7 910 aa9.03□□□□□ -0.96
PCNX4-212ENST00000556360 CHRDQ9H2X0 955 aa9.03□□□□□ -0.96
PCNX4-212ENST00000556360 DDX3YO15523 660 aaKnown RBP9.02□□□□□ -0.97
PCNX4-212ENST00000556360 MZF1P28698 734 aaPredicted RBP9.02□□□□□ -0.97
PCNX4-212ENST00000556360 CDC25BP30305 580 aa9.02□□□□□ -0.97
PCNX4-212ENST00000556360 NOM1Q5C9Z4 860 aaKnown RBP9.02□□□□□ -0.97
PCNX4-212ENST00000556360 UTP4Q969X6 686 aaKnown RBP9.02□□□□□ -0.97
PCNX4-212ENST00000556360 GGNBP2Q9H3C7 697 aa9.02□□□□□ -0.97
PCNX4-212ENST00000556360 FAM177BA6PVY3 158 aa9.01□□□□□ -0.97
PCNX4-212ENST00000556360 ACPPP15309 386 aa9.01□□□□□ -0.97
PCNX4-212ENST00000556360 CES1P23141 567 aa9.01□□□□□ -0.97
PCNX4-212ENST00000556360 SSTR4P31391 388 aa9.01□□□□□ -0.97
PCNX4-212ENST00000556360 CABP4P57796 275 aa9.01□□□□□ -0.97
PCNX4-212ENST00000556360 NFIAQ12857 509 aa9.01□□□□□ -0.97
PCNX4-212ENST00000556360 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.01□□□□□ -0.97
PCNX4-212ENST00000556360 PMEPA1Q969W9 287 aa9.01□□□□□ -0.97
PCNX4-212ENST00000556360 C7orf69Q9H7B7 122 aa9.01□□□□□ -0.97
PCNX4-212ENST00000556360 SOX13Q9UN79 622 aa9.01□□□□□ -0.97
PCNX4-212ENST00000556360 MED26O95402 600 aa9□□□□□ -0.97
PCNX4-212ENST00000556360 TGFB1P01137 390 aa9□□□□□ -0.97
PCNX4-212ENST00000556360 PCSK2P16519 638 aa9□□□□□ -0.97
PCNX4-212ENST00000556360 NPR3P17342 541 aa9□□□□□ -0.97
PCNX4-212ENST00000556360 EIF1AXP47813 144 aaKnown RBP9□□□□□ -0.97
PCNX4-212ENST00000556360 RNF43Q68DV7 783 aa9□□□□□ -0.97
PCNX4-212ENST00000556360 ANKRD34AQ69YU3 496 aa9□□□□□ -0.97
PCNX4-212ENST00000556360 MCTP1Q6DN14 999 aa9□□□□□ -0.97
PCNX4-212ENST00000556360 TMEM102Q8N9M5 508 aaPredicted RBP9□□□□□ -0.97
PCNX4-212ENST00000556360 PDE2AO00408 941 aaPredicted RBP8.99□□□□□ -0.97
PCNX4-212ENST00000556360 COBLO75128 1261 aa8.99□□□□□ -0.97
PCNX4-212ENST00000556360 DNM1Q05193 864 aaKnown RBP8.99□□□□□ -0.97
PCNX4-212ENST00000556360 KRTAP1-3Q8IUG1 177 aa8.99□□□□□ -0.97
PCNX4-212ENST00000556360 FAM20CQ8IXL6 584 aa8.99□□□□□ -0.97
PCNX4-212ENST00000556360 COL17A1Q9UMD9 1497 aaPredicted RBP8.98□□□□□ -0.97
PCNX4-212ENST00000556360 TMEM88BA6NKF7 163 aa8.98□□□□□ -0.97
PCNX4-212ENST00000556360 SPINK2P20155 84 aa8.98□□□□□ -0.97
PCNX4-212ENST00000556360 MPSTP25325 297 aa8.98□□□□□ -0.97
PCNX4-212ENST00000556360 SSFA2P28290 1259 aa8.98□□□□□ -0.97
PCNX4-212ENST00000556360 CLEC10AQ8IUN9 316 aa8.98□□□□□ -0.97
PCNX4-212ENST00000556360 TRIM42Q8IWZ5 723 aa8.98□□□□□ -0.97
PCNX4-212ENST00000556360 HHIPQ96QV1 700 aa8.98□□□□□ -0.97
PCNX4-212ENST00000556360 DBNDD2Q9BQY9 259 aa8.98□□□□□ -0.97
PCNX4-212ENST00000556360 RNF208Q9H0X6 261 aa8.98□□□□□ -0.97
PCNX4-212ENST00000556360 HIF3AQ9Y2N7 669 aa8.98□□□□□ -0.97
PCNX4-212ENST00000556360 MEGF11A6BM72 1044 aa8.97□□□□□ -0.97
PCNX4-212ENST00000556360 A6NHS1 94 aa8.97□□□□□ -0.97
PCNX4-212ENST00000556360 ALKBH2Q6NS38 261 aa8.97□□□□□ -0.97
PCNX4-212ENST00000556360 GTF3C2Q8WUA4 911 aaPredicted RBP8.97□□□□□ -0.97
PCNX4-212ENST00000556360 FAM83CQ9BQN1 747 aa8.97□□□□□ -0.97
PCNX4-212ENST00000556360 HMX2A2RU54 273 aa8.96□□□□□ -0.98
PCNX4-212ENST00000556360 PRR19A6NJB7 356 aa8.96□□□□□ -0.98
PCNX4-212ENST00000556360 PREPP48147 710 aa8.96□□□□□ -0.98
PCNX4-212ENST00000556360 INTS5Q6P9B9 1019 aaKnown RBP8.96□□□□□ -0.98
PCNX4-212ENST00000556360 NXPE3Q969Y0 559 aa8.96□□□□□ -0.98
PCNX4-212ENST00000556360 C8orf34Q49A92 452 aa8.95□□□□□ -0.98
PCNX4-212ENST00000556360 VN1R5Q7Z5H4 357 aa8.95□□□□□ -0.98
PCNX4-212ENST00000556360 BSNDQ8WZ55 320 aa8.95□□□□□ -0.98
PCNX4-212ENST00000556360 RUSC1Q9BVN2 902 aa8.95□□□□□ -0.98
PCNX4-212ENST00000556360 TNFRSF21O75509 655 aa8.94□□□□□ -0.98
PCNX4-212ENST00000556360 TRPA1O75762 1119 aa8.94□□□□□ -0.98
PCNX4-212ENST00000556360 NLRP12P59046 1061 aa8.94□□□□□ -0.98
PCNX4-212ENST00000556360 C19orf57Q0VDD7 668 aa8.94□□□□□ -0.98
PCNX4-212ENST00000556360 LCE3BQ5TA77 95 aa8.94□□□□□ -0.98
PCNX4-212ENST00000556360 SNX29Q8TEQ0 813 aa8.94□□□□□ -0.98
PCNX4-212ENST00000556360 ZKSCAN3Q9BRR0 538 aa8.94□□□□□ -0.98
PCNX4-212ENST00000556360 BHLHE41Q9C0J9 482 aaPredicted RBP8.94□□□□□ -0.98
PCNX4-212ENST00000556360 SOX17Q9H6I2 414 aaPredicted RBP8.94□□□□□ -0.98
PCNX4-212ENST00000556360 POLIQ9UNA4 740 aa8.94□□□□□ -0.98
PCNX4-212ENST00000556360 PPP1R15AO75807 674 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms