RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 KANSL3Q9P2N6 904 aa6.61□□□□□ -1.35
SUPT16H-206ENST00000556309 FOXD3Q9UJU5 478 aaPredicted RBP6.61□□□□□ -1.35
SUPT16H-206ENST00000556309 NAGPAQ9UK23 515 aa6.61□□□□□ -1.35
SUPT16H-206ENST00000556309 PATL2C9JE40 543 aaKnown RBP6.6□□□□□ -1.35
SUPT16H-206ENST00000556309 PSAPP07602 524 aa6.6□□□□□ -1.35
SUPT16H-206ENST00000556309 COL13A1Q5TAT6 717 aaPredicted RBP6.6□□□□□ -1.35
SUPT16H-206ENST00000556309 MSL1Q68DK7 614 aa6.6□□□□□ -1.35
SUPT16H-206ENST00000556309 PDE12Q6L8Q7 609 aaKnown RBP6.6□□□□□ -1.35
SUPT16H-206ENST00000556309 SHISA2Q6UWI4 295 aa6.6□□□□□ -1.35
SUPT16H-206ENST00000556309 FAM35AQ86V20 835 aa6.6□□□□□ -1.35
SUPT16H-206ENST00000556309 C1orf127Q8N9H9 656 aa6.6□□□□□ -1.35
SUPT16H-206ENST00000556309 NUDT8Q8WV74 236 aa6.6□□□□□ -1.35
SUPT16H-206ENST00000556309 TTC9Q92623 222 aa6.6□□□□□ -1.35
SUPT16H-206ENST00000556309 GZF1Q9H116 711 aaPredicted RBP6.6□□□□□ -1.35
SUPT16H-206ENST00000556309 SRA1Q9HD15 236 aaKnown RBP6.6□□□□□ -1.35
SUPT16H-206ENST00000556309 RPLP1P05386 114 aaKnown RBP6.59□□□□□ -1.35
SUPT16H-206ENST00000556309 MAPK1P28482 360 aa6.59□□□□□ -1.35
SUPT16H-206ENST00000556309 USP5P45974 858 aa6.59□□□□□ -1.35
SUPT16H-206ENST00000556309 CD97P48960 835 aa6.59□□□□□ -1.35
SUPT16H-206ENST00000556309 PLAURQ03405 335 aa6.59□□□□□ -1.35
SUPT16H-206ENST00000556309 PSAPL1Q6NUJ1 521 aa6.59□□□□□ -1.35
SUPT16H-206ENST00000556309 XKR5Q6UX68 686 aa6.59□□□□□ -1.35
SUPT16H-206ENST00000556309 OR13H1Q8NG92 308 aa6.59□□□□□ -1.35
SUPT16H-206ENST00000556309 TRPM4Q8TD43 1214 aa6.59□□□□□ -1.35
SUPT16H-206ENST00000556309 LOC102724428A0A0B4J2F2 783 aa6.58□□□□□ -1.36
SUPT16H-206ENST00000556309 TNFRSF21O75509 655 aa6.58□□□□□ -1.36
SUPT16H-206ENST00000556309 EIF2AK2P19525 551 aaKnown RBP6.58□□□□□ -1.36
SUPT16H-206ENST00000556309 IREB2P48200 963 aaKnown RBP6.58□□□□□ -1.36
SUPT16H-206ENST00000556309 NRLP54845 237 aa6.58□□□□□ -1.36
SUPT16H-206ENST00000556309 SIK1P57059 783 aa6.58□□□□□ -1.36
SUPT16H-206ENST00000556309 GPLD1P80108 840 aa6.58□□□□□ -1.36
SUPT16H-206ENST00000556309 DMRTC2Q8IXT2 367 aaPredicted RBP6.58□□□□□ -1.36
SUPT16H-206ENST00000556309 EREGO14944 169 aa6.57□□□□□ -1.36
SUPT16H-206ENST00000556309 GPR182O15218 404 aa6.57□□□□□ -1.36
SUPT16H-206ENST00000556309 POLR3DP05423 398 aaPredicted RBP6.57□□□□□ -1.36
SUPT16H-206ENST00000556309 FSTP19883 344 aa6.57□□□□□ -1.36
SUPT16H-206ENST00000556309 EHHADHQ08426 723 aa6.57□□□□□ -1.36
SUPT16H-206ENST00000556309 PERM1Q5SV97 790 aa6.57□□□□□ -1.36
SUPT16H-206ENST00000556309 FAM129BQ96TA1 746 aa6.57□□□□□ -1.36
SUPT16H-206ENST00000556309 NIF3L1Q9GZT8 377 aa6.57□□□□□ -1.36
SUPT16H-206ENST00000556309 CHRDQ9H2X0 955 aa6.57□□□□□ -1.36
SUPT16H-206ENST00000556309 DCTN4Q9UJW0 460 aa6.57□□□□□ -1.36
SUPT16H-206ENST00000556309 KIAA1324LA8MWY0 1029 aaPredicted RBP6.56□□□□□ -1.36
SUPT16H-206ENST00000556309 PHACTR2O75167 634 aa6.56□□□□□ -1.36
SUPT16H-206ENST00000556309 GHRHP01286 108 aa6.56□□□□□ -1.36
SUPT16H-206ENST00000556309 ACPPP15309 386 aa6.56□□□□□ -1.36
SUPT16H-206ENST00000556309 CES1P23141 567 aa6.56□□□□□ -1.36
SUPT16H-206ENST00000556309 NOS3P29474 1203 aa6.56□□□□□ -1.36
SUPT16H-206ENST00000556309 ORC1Q13415 861 aa6.56□□□□□ -1.36
SUPT16H-206ENST00000556309 FZD5Q13467 585 aa6.56□□□□□ -1.36
SUPT16H-206ENST00000556309 LCE1DQ5T752 114 aa6.56□□□□□ -1.36
SUPT16H-206ENST00000556309 INTS5Q6P9B9 1019 aaKnown RBP6.56□□□□□ -1.36
SUPT16H-206ENST00000556309 SND1Q7KZF4 910 aaKnown RBP eCLIP6.56□□□□□ -1.36
SUPT16H-206ENST00000556309 TMC7Q7Z402 723 aa6.56□□□□□ -1.36
SUPT16H-206ENST00000556309 WFDC8Q8IUA0 241 aa6.56□□□□□ -1.36
SUPT16H-206ENST00000556309 MAP4K3Q8IVH8 894 aa6.56□□□□□ -1.36
SUPT16H-206ENST00000556309 DZIP1LQ8IYY4 767 aaKnown RBP6.56□□□□□ -1.36
SUPT16H-206ENST00000556309 TMEM130Q8N3G9 435 aa6.56□□□□□ -1.36
SUPT16H-206ENST00000556309 LPIN3Q9BQK8 851 aa6.56□□□□□ -1.36
SUPT16H-206ENST00000556309 TRPA1O75762 1119 aa6.55□□□□□ -1.36
SUPT16H-206ENST00000556309 IGHA2P01877 340 aa6.55□□□□□ -1.36
SUPT16H-206ENST00000556309 SOX18P35713 384 aa6.55□□□□□ -1.36
SUPT16H-206ENST00000556309 GRIK1P39086 918 aa6.55□□□□□ -1.36
SUPT16H-206ENST00000556309 HYAL2Q12891 473 aa6.55□□□□□ -1.36
SUPT16H-206ENST00000556309 USPL1Q5W0Q7 1092 aa6.55□□□□□ -1.36
SUPT16H-206ENST00000556309 ELMSAN1Q6PJG2 1045 aa6.55□□□□□ -1.36
SUPT16H-206ENST00000556309 NCAPG2Q86XI2 1143 aa6.55□□□□□ -1.36
SUPT16H-206ENST00000556309 RBCK1Q9BYM8 510 aa6.55□□□□□ -1.36
SUPT16H-206ENST00000556309 KRTAP4-7Q9BYR0 210 aa6.55□□□□□ -1.36
SUPT16H-206ENST00000556309 MRPL18Q9H0U6 180 aaKnown RBP6.55□□□□□ -1.36
SUPT16H-206ENST00000556309 SMG9Q9H0W8 520 aaKnown RBP6.55□□□□□ -1.36
SUPT16H-206ENST00000556309 RNF114Q9Y508 228 aa6.55□□□□□ -1.36
SUPT16H-206ENST00000556309 ATP11AP98196 1134 aa6.54□□□□□ -1.36
SUPT16H-206ENST00000556309 PDE3BQ13370 1112 aa6.54□□□□□ -1.36
SUPT16H-206ENST00000556309 CACTIN-AS1Q8N1I8 211 aa6.54□□□□□ -1.36
SUPT16H-206ENST00000556309 SNX29Q8TEQ0 813 aa6.54□□□□□ -1.36
SUPT16H-206ENST00000556309 PLD4Q96BZ4 506 aa6.54□□□□□ -1.36
SUPT16H-206ENST00000556309 CITED4Q96RK1 184 aa6.54□□□□□ -1.36
SUPT16H-206ENST00000556309 AKTIPQ9H8T0 292 aa6.54□□□□□ -1.36
SUPT16H-206ENST00000556309 ZFYVE28Q9HCC9 887 aa6.54□□□□□ -1.36
SUPT16H-206ENST00000556309 ZBTB7CA1YPR0 619 aa6.53□□□□□ -1.36
SUPT16H-206ENST00000556309 HOXD8P13378 290 aaPredicted RBP6.53□□□□□ -1.36
SUPT16H-206ENST00000556309 TAL1P17542 331 aaPredicted RBP6.53□□□□□ -1.36
SUPT16H-206ENST00000556309 TRIM26Q12899 539 aaPredicted RBP6.53□□□□□ -1.36
SUPT16H-206ENST00000556309 GDF6Q6KF10 455 aaPredicted RBP6.53□□□□□ -1.36
SUPT16H-206ENST00000556309 SPACA7Q96KW9 195 aa6.53□□□□□ -1.36
SUPT16H-206ENST00000556309 RASSF4Q9H2L5 321 aa6.53□□□□□ -1.36
SUPT16H-206ENST00000556309 LATS2Q9NRM7 1088 aa6.53□□□□□ -1.36
SUPT16H-206ENST00000556309 SALL4Q9UJQ4 1053 aa6.53□□□□□ -1.36
SUPT16H-206ENST00000556309 KIF4AO95239 1232 aa6.52□□□□□ -1.37
SUPT16H-206ENST00000556309 GP2P55259 537 aaKnown RBP6.52□□□□□ -1.37
SUPT16H-206ENST00000556309 GRIK5Q16478 980 aa6.52□□□□□ -1.37
SUPT16H-206ENST00000556309 ADAMTSL4Q6UY14 1074 aa6.52□□□□□ -1.37
SUPT16H-206ENST00000556309 CEP120Q8N960 986 aa6.52□□□□□ -1.37
SUPT16H-206ENST00000556309 MEGF10Q96KG7 1140 aa6.52□□□□□ -1.37
SUPT16H-206ENST00000556309 DMRTB1Q96MA1 342 aa6.52□□□□□ -1.37
SUPT16H-206ENST00000556309 RBSNQ9H1K0 784 aa6.52□□□□□ -1.37
SUPT16H-206ENST00000556309 TRIM33Q9UPN9 1127 aa6.52□□□□□ -1.37
SUPT16H-206ENST00000556309 AMOTL2Q9Y2J4 779 aa6.52□□□□□ -1.37
SUPT16H-206ENST00000556309 SSTR4P31391 388 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms