RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 FAM160A1Q05DH4 1040 aa6.09□□□□□ -1.43
SPTLC2-204ENST00000556264 SPRED3Q2MJR0 410 aa6.09□□□□□ -1.43
SPTLC2-204ENST00000556264 RAB44Q7Z6P3 723 aaPredicted RBP6.09□□□□□ -1.43
SPTLC2-204ENST00000556264 PHC3Q8NDX5 983 aa6.09□□□□□ -1.43
SPTLC2-204ENST00000556264 EAF1Q96JC9 268 aaPredicted RBP6.09□□□□□ -1.43
SPTLC2-204ENST00000556264 SLC30A3Q99726 388 aa6.09□□□□□ -1.43
SPTLC2-204ENST00000556264 ZFYVE1Q9HBF4 777 aa6.09□□□□□ -1.43
SPTLC2-204ENST00000556264 DZANK1Q9NVP4 752 aa6.09□□□□□ -1.43
SPTLC2-204ENST00000556264 HCN2Q9UL51 889 aa6.09□□□□□ -1.43
SPTLC2-204ENST00000556264 TLR6Q9Y2C9 796 aa6.09□□□□□ -1.43
SPTLC2-204ENST00000556264 EFR3BQ9Y2G0 817 aa6.09□□□□□ -1.43
SPTLC2-204ENST00000556264 TLDC2A0PJX2 215 aa6.08□□□□□ -1.44
SPTLC2-204ENST00000556264 SLC35F4A4IF30 521 aa6.08□□□□□ -1.44
SPTLC2-204ENST00000556264 METTL12A8MUP2 240 aa6.08□□□□□ -1.44
SPTLC2-204ENST00000556264 H7C1W4 665 aa6.08□□□□□ -1.44
SPTLC2-204ENST00000556264 DGAT1O75907 488 aa6.08□□□□□ -1.44
SPTLC2-204ENST00000556264 SSBP05455 408 aaKnown RBP eCLIP6.08□□□□□ -1.44
SPTLC2-204ENST00000556264 CELA3AP09093 270 aa6.08□□□□□ -1.44
SPTLC2-204ENST00000556264 CD33P20138 364 aa6.08□□□□□ -1.44
SPTLC2-204ENST00000556264 NASPP49321 788 aaPredicted RBP6.08□□□□□ -1.44
SPTLC2-204ENST00000556264 PTSQ03393 145 aa6.08□□□□□ -1.44
SPTLC2-204ENST00000556264 DBN1Q16643 649 aa6.08□□□□□ -1.44
SPTLC2-204ENST00000556264 PKDCCQ504Y2 493 aa6.08□□□□□ -1.44
SPTLC2-204ENST00000556264 FBXL19Q6PCT2 694 aa6.08□□□□□ -1.44
SPTLC2-204ENST00000556264 DHX32Q7L7V1 743 aaKnown RBP6.08□□□□□ -1.44
SPTLC2-204ENST00000556264 ABHD17AQ96GS6 310 aa6.08□□□□□ -1.44
SPTLC2-204ENST00000556264 NSUN5Q96P11 429 aaKnown RBP6.08□□□□□ -1.44
SPTLC2-204ENST00000556264 CEP44Q9C0F1 390 aa6.08□□□□□ -1.44
SPTLC2-204ENST00000556264 OSBPL2Q9H1P3 480 aa6.08□□□□□ -1.44
SPTLC2-204ENST00000556264 GINM1Q9NU53 330 aa6.08□□□□□ -1.44
SPTLC2-204ENST00000556264 NDFIP2Q9NV92 336 aa6.08□□□□□ -1.44
SPTLC2-204ENST00000556264 TMA7Q9Y2S6 64 aaKnown RBP6.08□□□□□ -1.44
SPTLC2-204ENST00000556264 PF4P02776 101 aa6.07□□□□□ -1.44
SPTLC2-204ENST00000556264 LIG3P49916 1009 aa6.07□□□□□ -1.44
SPTLC2-204ENST00000556264 CKAP2LQ8IYA6 745 aa6.07□□□□□ -1.44
SPTLC2-204ENST00000556264 TRIM22Q8IYM9 498 aa6.07□□□□□ -1.44
SPTLC2-204ENST00000556264 NXPE3Q969Y0 559 aa6.07□□□□□ -1.44
SPTLC2-204ENST00000556264 SPACA7Q96KW9 195 aa6.07□□□□□ -1.44
SPTLC2-204ENST00000556264 HHIPQ96QV1 700 aa6.07□□□□□ -1.44
SPTLC2-204ENST00000556264 NT5C1AQ9BXI3 368 aa6.07□□□□□ -1.44
SPTLC2-204ENST00000556264 EFCC1Q9HA90 598 aa6.07□□□□□ -1.44
SPTLC2-204ENST00000556264 A0A096LPE4 126 aa6.06□□□□□ -1.44
SPTLC2-204ENST00000556264 LOC102724428A0A0B4J2F2 783 aa6.06□□□□□ -1.44
SPTLC2-204ENST00000556264 A0A1W2PPZ6 126 aa6.06□□□□□ -1.44
SPTLC2-204ENST00000556264 J3QW42 95 aa6.06□□□□□ -1.44
SPTLC2-204ENST00000556264 HOXD8P13378 290 aaPredicted RBP6.06□□□□□ -1.44
SPTLC2-204ENST00000556264 ITPKAP23677 461 aa6.06□□□□□ -1.44
SPTLC2-204ENST00000556264 NRLP54845 237 aa6.06□□□□□ -1.44
SPTLC2-204ENST00000556264 SIK1P57059 783 aa6.06□□□□□ -1.44
SPTLC2-204ENST00000556264 MLLT1Q03111 559 aaPredicted RBP6.06□□□□□ -1.44
SPTLC2-204ENST00000556264 NFX1Q12986 1120 aaKnown RBP6.06□□□□□ -1.44
SPTLC2-204ENST00000556264 CAMK2GQ13555 558 aaPredicted RBP6.06□□□□□ -1.44
SPTLC2-204ENST00000556264 BMS1Q14692 1282 aaKnown RBP6.06□□□□□ -1.44
SPTLC2-204ENST00000556264 GOLM1Q8NBJ4 401 aa6.06□□□□□ -1.44
SPTLC2-204ENST00000556264 ASAP3Q8TDY4 903 aa6.06□□□□□ -1.44
SPTLC2-204ENST00000556264 RHOVQ96L33 236 aa6.06□□□□□ -1.44
SPTLC2-204ENST00000556264 ZNF408Q9H9D4 720 aa6.06□□□□□ -1.44
SPTLC2-204ENST00000556264 UBP1Q9NZI7 540 aa6.06□□□□□ -1.44
SPTLC2-204ENST00000556264 SUPT16HQ9Y5B9 1047 aaKnown RBP6.06□□□□□ -1.44
SPTLC2-204ENST00000556264 MRVI1Q9Y6F6 885 aa6.06□□□□□ -1.44
SPTLC2-204ENST00000556264 ZBTB42B2RXF5 422 aa6.05□□□□□ -1.44
SPTLC2-204ENST00000556264 NFKBIEO00221 500 aa6.05□□□□□ -1.44
SPTLC2-204ENST00000556264 PDE2AO00408 941 aaPredicted RBP6.05□□□□□ -1.44
SPTLC2-204ENST00000556264 ENC1O14682 589 aa6.05□□□□□ -1.44
SPTLC2-204ENST00000556264 PPM1GO15355 546 aaPredicted RBP6.05□□□□□ -1.44
SPTLC2-204ENST00000556264 GREM1O60565 184 aa6.05□□□□□ -1.44
SPTLC2-204ENST00000556264 GARTP22102 1010 aa6.05□□□□□ -1.44
SPTLC2-204ENST00000556264 ETFBP38117 255 aa6.05□□□□□ -1.44
SPTLC2-204ENST00000556264 SNAP47Q5SQN1 464 aa6.05□□□□□ -1.44
SPTLC2-204ENST00000556264 TTBK2Q6IQ55 1244 aa6.05□□□□□ -1.44
SPTLC2-204ENST00000556264 HFE2Q6ZVN8 426 aa6.05□□□□□ -1.44
SPTLC2-204ENST00000556264 CRIPAKQ8N1N5 446 aa6.05□□□□□ -1.44
SPTLC2-204ENST00000556264 CCDC155Q8N6L0 562 aa6.05□□□□□ -1.44
SPTLC2-204ENST00000556264 TMEM102Q8N9M5 508 aaPredicted RBP6.05□□□□□ -1.44
SPTLC2-204ENST00000556264 NECAB3Q96P71 396 aaPredicted RBP6.05□□□□□ -1.44
SPTLC2-204ENST00000556264 BHLHE41Q9C0J9 482 aaPredicted RBP6.05□□□□□ -1.44
SPTLC2-204ENST00000556264 IGFLR1Q9H665 355 aa6.05□□□□□ -1.44
SPTLC2-204ENST00000556264 ATP13A2Q9NQ11 1180 aa6.05□□□□□ -1.44
SPTLC2-204ENST00000556264 SEC31BQ9NQW1 1179 aa6.05□□□□□ -1.44
SPTLC2-204ENST00000556264 KCNQ5Q9NR82 932 aa6.05□□□□□ -1.44
SPTLC2-204ENST00000556264 ANKRD62A6NC57 917 aa6.04□□□□□ -1.44
SPTLC2-204ENST00000556264 PAGE1O75459 146 aa6.04□□□□□ -1.44
SPTLC2-204ENST00000556264 TFE3P19532 575 aaPredicted RBP6.04□□□□□ -1.44
SPTLC2-204ENST00000556264 CDK11BP21127 795 aaKnown RBP6.04□□□□□ -1.44
SPTLC2-204ENST00000556264 SOX9P48436 509 aa6.04□□□□□ -1.44
SPTLC2-204ENST00000556264 ZNF157P51786 506 aaPredicted RBP6.04□□□□□ -1.44
SPTLC2-204ENST00000556264 LMNB2Q03252 620 aa6.04□□□□□ -1.44
SPTLC2-204ENST00000556264 APOBRQ0VD83 1088 aa6.04□□□□□ -1.44
SPTLC2-204ENST00000556264 FAAP100Q0VG06 881 aa6.04□□□□□ -1.44
SPTLC2-204ENST00000556264 NEUROD1Q13562 356 aa6.04□□□□□ -1.44
SPTLC2-204ENST00000556264 COL9A2Q14055 689 aaPredicted RBP6.04□□□□□ -1.44
SPTLC2-204ENST00000556264 SDE2Q6IQ49 451 aa6.04□□□□□ -1.44
SPTLC2-204ENST00000556264 AGMOQ6ZNB7 445 aa6.04□□□□□ -1.44
SPTLC2-204ENST00000556264 ZNF662Q6ZS27 426 aa6.04□□□□□ -1.44
SPTLC2-204ENST00000556264 TRPM4Q8TD43 1214 aa6.04□□□□□ -1.44
SPTLC2-204ENST00000556264 CPLX3Q8WVH0 158 aa6.04□□□□□ -1.44
SPTLC2-204ENST00000556264 GTPBP3Q969Y2 492 aaKnown RBP6.04□□□□□ -1.44
SPTLC2-204ENST00000556264 PBX4Q9BYU1 374 aa6.04□□□□□ -1.44
SPTLC2-204ENST00000556264 RASSF4Q9H2L5 321 aa6.04□□□□□ -1.44
SPTLC2-204ENST00000556264 GPN3Q9UHW5 284 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms