RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 MYH14Q7Z406 1995 aaKnown RBP9.5□□□□□ -0.89
ATXN3-236ENST00000556220 IQCA1LA6NCM1 817 aa9.49□□□□□ -0.89
ATXN3-236ENST00000556220 RASSF10A6NK89 507 aa9.49□□□□□ -0.89
ATXN3-236ENST00000556220 C21orf2O43822 256 aa9.49□□□□□ -0.89
ATXN3-236ENST00000556220 VARSP26640 1264 aaKnown RBP9.49□□□□□ -0.89
ATXN3-236ENST00000556220 MTHFSP49914 203 aa9.49□□□□□ -0.89
ATXN3-236ENST00000556220 MPNDQ8N594 471 aa9.49□□□□□ -0.89
ATXN3-236ENST00000556220 ZNF511Q8NB15 262 aa9.49□□□□□ -0.89
ATXN3-236ENST00000556220 NFATC2IPQ8NCF5 419 aa9.49□□□□□ -0.89
ATXN3-236ENST00000556220 ZNF622Q969S3 477 aaKnown RBP eCLIP9.49□□□□□ -0.89
ATXN3-236ENST00000556220 KIFC2Q96AC6 838 aa9.49□□□□□ -0.89
ATXN3-236ENST00000556220 CARD14Q9BXL6 1004 aa9.49□□□□□ -0.89
ATXN3-236ENST00000556220 TAF1DQ9H5J8 278 aaPredicted RBP9.49□□□□□ -0.89
ATXN3-236ENST00000556220 POLKQ9UBT6 870 aa9.49□□□□□ -0.89
ATXN3-236ENST00000556220 NARFQ9UHQ1 456 aa9.49□□□□□ -0.89
ATXN3-236ENST00000556220 CFAP99D6REC4 459 aa9.48□□□□□ -0.89
ATXN3-236ENST00000556220 EIF4A2Q14240 407 aaKnown RBP9.48□□□□□ -0.89
ATXN3-236ENST00000556220 TUSC1Q2TAM9 212 aa9.48□□□□□ -0.89
ATXN3-236ENST00000556220 LINC01559Q495D7 138 aa9.48□□□□□ -0.89
ATXN3-236ENST00000556220 AMOTQ4VCS5 1084 aa9.48□□□□□ -0.89
ATXN3-236ENST00000556220 SOS1Q07889 1333 aaPredicted RBP9.48□□□□□ -0.89
ATXN3-236ENST00000556220 WDR33Q9C0J8 1336 aaKnown RBP9.48□□□□□ -0.89
ATXN3-236ENST00000556220 LTBP3Q9NS15 1303 aa9.48□□□□□ -0.89
ATXN3-236ENST00000556220 PDE4DIPQ5VU43 2346 aa9.48□□□□□ -0.89
ATXN3-236ENST00000556220 CTHP32929 405 aa9.47□□□□□ -0.89
ATXN3-236ENST00000556220 ZNF530Q6P9A1 599 aaPredicted RBP9.47□□□□□ -0.89
ATXN3-236ENST00000556220 DNAJC10Q8IXB1 793 aa9.47□□□□□ -0.89
ATXN3-236ENST00000556220 TAOK3Q9H2K8 898 aa9.47□□□□□ -0.89
ATXN3-236ENST00000556220 ZNF831Q5JPB2 1677 aa9.47□□□□□ -0.89
ATXN3-236ENST00000556220 CYP19A1P11511 503 aaPredicted RBP9.46□□□□□ -0.9
ATXN3-236ENST00000556220 SNRPBP14678 240 aaKnown RBP9.46□□□□□ -0.9
ATXN3-236ENST00000556220 BRIP1Q9BX63 1249 aa9.46□□□□□ -0.9
ATXN3-236ENST00000556220 SLC24A3Q9HC58 644 aa9.46□□□□□ -0.9
ATXN3-236ENST00000556220 WFS1O76024 890 aa9.45□□□□□ -0.9
ATXN3-236ENST00000556220 PDE6BP35913 854 aa9.45□□□□□ -0.9
ATXN3-236ENST00000556220 EAPPQ56P03 285 aaPredicted RBP9.45□□□□□ -0.9
ATXN3-236ENST00000556220 C1orf141Q5JVX7 400 aa9.45□□□□□ -0.9
ATXN3-236ENST00000556220 MYSM1Q5VVJ2 828 aa9.45□□□□□ -0.9
ATXN3-236ENST00000556220 CNTROBQ8N137 903 aa9.45□□□□□ -0.9
ATXN3-236ENST00000556220 CAPN5O15484 640 aaPredicted RBP9.44□□□□□ -0.9
ATXN3-236ENST00000556220 F12P00748 615 aaPredicted RBP9.44□□□□□ -0.9
ATXN3-236ENST00000556220 CDCA8Q53HL2 280 aa9.44□□□□□ -0.9
ATXN3-236ENST00000556220 SOGA3Q5TF21 947 aa9.44□□□□□ -0.9
ATXN3-236ENST00000556220 BICDL1Q6ZP65 573 aa9.44□□□□□ -0.9
ATXN3-236ENST00000556220 CNKSR1Q969H4 720 aa9.44□□□□□ -0.9
ATXN3-236ENST00000556220 HACL1Q9UJ83 578 aa9.44□□□□□ -0.9
ATXN3-236ENST00000556220 ABT1Q9ULW3 272 aaKnown RBP9.44□□□□□ -0.9
ATXN3-236ENST00000556220 ZBTB1Q9Y2K1 713 aa9.44□□□□□ -0.9
ATXN3-236ENST00000556220 CARMIL3Q8ND23 1372 aa9.44□□□□□ -0.9
ATXN3-236ENST00000556220 COL5A3P25940 1745 aaPredicted RBP9.44□□□□□ -0.9
ATXN3-236ENST00000556220 EPHX2P34913 555 aa9.43□□□□□ -0.9
ATXN3-236ENST00000556220 CSPP1Q1MSJ5 1256 aa9.43□□□□□ -0.9
ATXN3-236ENST00000556220 MAP1SQ66K74 1059 aaPredicted RBP9.43□□□□□ -0.9
ATXN3-236ENST00000556220 PNMA8AQ86V59 439 aaPredicted RBP9.43□□□□□ -0.9
ATXN3-236ENST00000556220 FAM174AQ8TBP5 190 aa9.43□□□□□ -0.9
ATXN3-236ENST00000556220 LIMD1Q9UGP4 676 aa9.43□□□□□ -0.9
ATXN3-236ENST00000556220 COL15A1P39059 1388 aa9.42□□□□□ -0.9
ATXN3-236ENST00000556220 LILRB3O75022 631 aa9.42□□□□□ -0.9
ATXN3-236ENST00000556220 ECE1P42892 770 aa9.42□□□□□ -0.9
ATXN3-236ENST00000556220 NFX1Q12986 1120 aaKnown RBP9.42□□□□□ -0.9
ATXN3-236ENST00000556220 TBC1D9BQ66K14 1250 aa9.42□□□□□ -0.9
ATXN3-236ENST00000556220 STYK1Q6J9G0 422 aa9.42□□□□□ -0.9
ATXN3-236ENST00000556220 PRR5LQ6MZQ0 368 aa9.42□□□□□ -0.9
ATXN3-236ENST00000556220 C7orf43Q8WVR3 580 aa9.42□□□□□ -0.9
ATXN3-236ENST00000556220 GPR101Q96P66 508 aaPredicted RBP9.42□□□□□ -0.9
ATXN3-236ENST00000556220 MCOLN1Q9GZU1 580 aa9.42□□□□□ -0.9
ATXN3-236ENST00000556220 RSPH6AQ9H0K4 717 aa9.42□□□□□ -0.9
ATXN3-236ENST00000556220 DDX21Q9NR30 783 aaKnown RBP eCLIP9.42□□□□□ -0.9
ATXN3-236ENST00000556220 CCDC88AQ3V6T2 1871 aa9.41□□□□□ -0.9
ATXN3-236ENST00000556220 A0A087WZG4 1122 aa9.41□□□□□ -0.9
ATXN3-236ENST00000556220 SRGNP10124 158 aa9.41□□□□□ -0.9
ATXN3-236ENST00000556220 CANXP27824 592 aaKnown RBP9.41□□□□□ -0.9
ATXN3-236ENST00000556220 EIF5P55010 431 aaKnown RBP9.41□□□□□ -0.9
ATXN3-236ENST00000556220 SLC39A6Q13433 755 aa9.41□□□□□ -0.9
ATXN3-236ENST00000556220 QPCTQ16769 361 aa9.41□□□□□ -0.9
ATXN3-236ENST00000556220 PRPF40BQ6NWY9 871 aaKnown RBP9.41□□□□□ -0.9
ATXN3-236ENST00000556220 MASTLQ96GX5 879 aa9.41□□□□□ -0.9
ATXN3-236ENST00000556220 CAPNS2Q96L46 248 aa9.41□□□□□ -0.9
ATXN3-236ENST00000556220 SLC52A2Q9HAB3 445 aa9.41□□□□□ -0.9
ATXN3-236ENST00000556220 MAP10Q9P2G4 905 aa9.41□□□□□ -0.9
ATXN3-236ENST00000556220 TLL2Q9Y6L7 1015 aa9.41□□□□□ -0.9
ATXN3-236ENST00000556220 ZNF541Q9H0D2 1346 aa9.4□□□□□ -0.9
ATXN3-236ENST00000556220 TERTO14746 1132 aaKnown RBP9.4□□□□□ -0.9
ATXN3-236ENST00000556220 PER1O15534 1290 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-236ENST00000556220 MAP2K2P36507 400 aa9.4□□□□□ -0.9
ATXN3-236ENST00000556220 TNNT2P45379 298 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-236ENST00000556220 CYP4F22Q6NT55 531 aa9.4□□□□□ -0.9
ATXN3-236ENST00000556220 AEBP1Q8IUX7 1158 aa9.4□□□□□ -0.9
ATXN3-236ENST00000556220 VIRMAQ69YN4 1812 aaKnown RBP9.4□□□□□ -0.91
ATXN3-236ENST00000556220 TIAM2Q8IVF5 1701 aa9.39□□□□□ -0.91
ATXN3-236ENST00000556220 NRXN2Q9P2S2 1712 aa9.39□□□□□ -0.91
ATXN3-236ENST00000556220 ADAMTS7Q9UKP4 1686 aa9.39□□□□□ -0.91
ATXN3-236ENST00000556220 FZD9O00144 591 aa9.39□□□□□ -0.91
ATXN3-236ENST00000556220 CCDC93Q567U6 631 aa9.39□□□□□ -0.91
ATXN3-236ENST00000556220 AKAP4Q5JQC9 854 aa9.39□□□□□ -0.91
ATXN3-236ENST00000556220 TRIM46Q7Z4K8 759 aa9.39□□□□□ -0.91
ATXN3-236ENST00000556220 ARMC2Q8NEN0 867 aa9.39□□□□□ -0.91
ATXN3-236ENST00000556220 CDK15Q96Q40 435 aa9.39□□□□□ -0.91
ATXN3-236ENST00000556220 LGR6Q9HBX8 967 aa9.39□□□□□ -0.91
ATXN3-236ENST00000556220 ZNF277Q9NRM2 450 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms