RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 TTC14Q96N46 770 aa17.33■□□□□ 0.37
NEK9-209ENST00000556170 EPB41L2O43491 1005 aaKnown RBP17.33■□□□□ 0.36
NEK9-209ENST00000556170 LEO1Q8WVC0 666 aaPredicted RBP17.33■□□□□ 0.36
NEK9-209ENST00000556170 HOMER1Q86YM7 354 aa17.33■□□□□ 0.36
NEK9-209ENST00000556170 PPP1R9BQ96SB3 815 aa17.33■□□□□ 0.36
NEK9-209ENST00000556170 NCOA3Q9Y6Q9 1424 aa17.33■□□□□ 0.36
NEK9-209ENST00000556170 E7EWF7 191 aa17.32■□□□□ 0.36
NEK9-209ENST00000556170 HSPD1P10809 573 aaKnown RBP17.32■□□□□ 0.36
NEK9-209ENST00000556170 TMEM67Q5HYA8 995 aa17.32■□□□□ 0.36
NEK9-209ENST00000556170 BRINP3Q76B58 766 aa17.32■□□□□ 0.36
NEK9-209ENST00000556170 CEP57L1Q8IYX8 460 aa17.32■□□□□ 0.36
NEK9-209ENST00000556170 UBAC1Q9BSL1 405 aa17.32■□□□□ 0.36
NEK9-209ENST00000556170 CCDC186Q7Z3E2 898 aa17.32■□□□□ 0.36
NEK9-209ENST00000556170 FAM200AQ8TCP9 573 aa17.32■□□□□ 0.36
NEK9-209ENST00000556170 ZSCAN16Q9H4T2 348 aaPredicted RBP17.32■□□□□ 0.36
NEK9-209ENST00000556170 PRDM10Q9NQV6 1147 aa17.32■□□□□ 0.36
NEK9-209ENST00000556170 GPHNQ9NQX3 736 aaPredicted RBP17.32■□□□□ 0.36
NEK9-209ENST00000556170 GPAA1O43292 621 aa17.32■□□□□ 0.36
NEK9-209ENST00000556170 ZKSCAN3Q9BRR0 538 aa17.32■□□□□ 0.36
NEK9-209ENST00000556170 FTOQ9C0B1 505 aaKnown RBP eCLIP17.32■□□□□ 0.36
NEK9-209ENST00000556170 ZHX1Q9UKY1 873 aaPredicted RBP17.32■□□□□ 0.36
NEK9-209ENST00000556170 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.32■□□□□ 0.36
NEK9-209ENST00000556170 SLC5A1P13866 664 aa17.31■□□□□ 0.36
NEK9-209ENST00000556170 METAP2P50579 478 aaKnown RBP eCLIP17.31■□□□□ 0.36
NEK9-209ENST00000556170 TRIM22Q8IYM9 498 aa17.31■□□□□ 0.36
NEK9-209ENST00000556170 NOL7Q9UMY1 257 aaKnown RBP17.31■□□□□ 0.36
NEK9-209ENST00000556170 NIP7Q9Y221 180 aaKnown RBP eCLIP17.31■□□□□ 0.36
NEK9-209ENST00000556170 ERVV-2B6SEH9 535 aa17.31■□□□□ 0.36
NEK9-209ENST00000556170 CLIP2Q9UDT6 1046 aa17.31■□□□□ 0.36
NEK9-209ENST00000556170 A0A087WWV3 80 aa17.31■□□□□ 0.36
NEK9-209ENST00000556170 GOLGA8AA7E2F4 631 aa17.31■□□□□ 0.36
NEK9-209ENST00000556170 SNAP23O00161 211 aa17.31■□□□□ 0.36
NEK9-209ENST00000556170 C16orf45Q96MC5 204 aaPredicted RBP17.31■□□□□ 0.36
NEK9-209ENST00000556170 MYL10Q9BUA6 226 aa17.31■□□□□ 0.36
NEK9-209ENST00000556170 HELLSQ9NRZ9 838 aa17.31■□□□□ 0.36
NEK9-209ENST00000556170 SLC12A7Q9Y666 1083 aa17.31■□□□□ 0.36
NEK9-209ENST00000556170 A0A1B0GVL5 298 aa17.3■□□□□ 0.36
NEK9-209ENST00000556170 RAD21O60216 631 aa17.3■□□□□ 0.36
NEK9-209ENST00000556170 UVSSAQ2YD98 709 aa17.3■□□□□ 0.36
NEK9-209ENST00000556170 CCDC24Q8N4L8 307 aa17.3■□□□□ 0.36
NEK9-209ENST00000556170 PDILTQ8N807 584 aa17.3■□□□□ 0.36
NEK9-209ENST00000556170 GTF3C6Q969F1 213 aa17.3■□□□□ 0.36
NEK9-209ENST00000556170 ZFYP08048 801 aaPredicted RBP17.3■□□□□ 0.36
NEK9-209ENST00000556170 SLC26A6Q9BXS9 759 aa17.3■□□□□ 0.36
NEK9-209ENST00000556170 B4E1Z4 1266 aa17.3■□□□□ 0.36
NEK9-209ENST00000556170 RANBP6O60518 1105 aaKnown RBP17.3■□□□□ 0.36
NEK9-209ENST00000556170 HSP90AA4PQ58FG1 418 aa17.3■□□□□ 0.36
NEK9-209ENST00000556170 CLEC17AQ6ZS10 378 aa17.3■□□□□ 0.36
NEK9-209ENST00000556170 GREM2Q9H772 168 aa17.3■□□□□ 0.36
NEK9-209ENST00000556170 JAG2Q9Y219 1238 aa17.3■□□□□ 0.36
NEK9-209ENST00000556170 WDR17Q8IZU2 1322 aa17.3■□□□□ 0.36
NEK9-209ENST00000556170 ZNF335Q9H4Z2 1342 aaPredicted RBP17.3■□□□□ 0.36
NEK9-209ENST00000556170 PDCL3Q9H2J4 239 aa17.3■□□□□ 0.36
NEK9-209ENST00000556170 TRMT1Q9NXH9 659 aaKnown RBP17.3■□□□□ 0.36
NEK9-209ENST00000556170 SPATA31A3Q5VYP0 1347 aa17.29■□□□□ 0.36
NEK9-209ENST00000556170 IARSP41252 1262 aaKnown RBP17.29■□□□□ 0.36
NEK9-209ENST00000556170 SCRN1Q12765 414 aa17.29■□□□□ 0.36
NEK9-209ENST00000556170 NOLC1Q14978 699 aaKnown RBP eCLIP17.29■□□□□ 0.36
NEK9-209ENST00000556170 MAGEB6Q8N7X4 407 aa17.29■□□□□ 0.36
NEK9-209ENST00000556170 CCDC34Q96HJ3 373 aa17.29■□□□□ 0.36
NEK9-209ENST00000556170 NR1I2O75469 434 aa17.29■□□□□ 0.36
NEK9-209ENST00000556170 DDB1Q16531 1140 aa17.29■□□□□ 0.36
NEK9-209ENST00000556170 GNL3LQ9NVN8 582 aaKnown RBP17.29■□□□□ 0.36
NEK9-209ENST00000556170 PTGS1P23219 599 aa17.29■□□□□ 0.36
NEK9-209ENST00000556170 ALG1Q9BT22 464 aa17.29■□□□□ 0.36
NEK9-209ENST00000556170 ZBTB1Q9Y2K1 713 aa17.29■□□□□ 0.36
NEK9-209ENST00000556170 CDKL5O76039 1030 aa17.28■□□□□ 0.36
NEK9-209ENST00000556170 SERPINC1P01008 464 aa17.28■□□□□ 0.36
NEK9-209ENST00000556170 PXDNQ92626 1479 aa17.28■□□□□ 0.36
NEK9-209ENST00000556170 RIMS1Q86UR5 1692 aaKnown RBP17.28■□□□□ 0.36
NEK9-209ENST00000556170 OFD1O75665 1012 aa17.28■□□□□ 0.36
NEK9-209ENST00000556170 HEG1Q9ULI3 1381 aa17.28■□□□□ 0.36
NEK9-209ENST00000556170 C1orf167Q5SNV9 1468 aa17.28■□□□□ 0.36
NEK9-209ENST00000556170 FGAP02671 866 aa17.28■□□□□ 0.36
NEK9-209ENST00000556170 OSBP2Q969R2 916 aa17.28■□□□□ 0.36
NEK9-209ENST00000556170 OLFM4Q6UX06 510 aa17.27■□□□□ 0.36
NEK9-209ENST00000556170 JMYQ8N9B5 988 aa17.27■□□□□ 0.36
NEK9-209ENST00000556170 PIGBQ92521 554 aa17.27■□□□□ 0.36
NEK9-209ENST00000556170 TPM3P06753 285 aa17.27■□□□□ 0.36
NEK9-209ENST00000556170 KCNQ4P56696 695 aa17.27■□□□□ 0.36
NEK9-209ENST00000556170 TOB2Q14106 344 aaPredicted RBP17.27■□□□□ 0.36
NEK9-209ENST00000556170 CCAR2Q8N163 923 aaKnown RBP17.27■□□□□ 0.36
NEK9-209ENST00000556170 ANO10Q9NW15 660 aa17.27■□□□□ 0.36
NEK9-209ENST00000556170 TTF1Q15361 905 aaPredicted RBP17.27■□□□□ 0.35
NEK9-209ENST00000556170 FAM177A1Q8N128 213 aaPredicted RBP17.27■□□□□ 0.35
NEK9-209ENST00000556170 APPBP2Q92624 585 aa17.27■□□□□ 0.35
NEK9-209ENST00000556170 PHKBQ93100 1093 aa17.27■□□□□ 0.35
NEK9-209ENST00000556170 H7C1W4 665 aa17.26■□□□□ 0.35
NEK9-209ENST00000556170 SLC4A4Q9Y6R1 1079 aa17.26■□□□□ 0.35
NEK9-209ENST00000556170 ZBTB43O43298 467 aa17.26■□□□□ 0.35
NEK9-209ENST00000556170 HLFQ16534 295 aa17.26■□□□□ 0.35
NEK9-209ENST00000556170 MFSD6Q6ZSS7 791 aa17.26■□□□□ 0.35
NEK9-209ENST00000556170 USP28Q96RU2 1077 aa17.26■□□□□ 0.35
NEK9-209ENST00000556170 MAST3O60307 1309 aa17.26■□□□□ 0.35
NEK9-209ENST00000556170 MBD4O95243 580 aa17.26■□□□□ 0.35
NEK9-209ENST00000556170 SLC3A2P08195 630 aaKnown RBP17.26■□□□□ 0.35
NEK9-209ENST00000556170 MAPK8IP2Q13387 824 aaPredicted RBP17.26■□□□□ 0.35
NEK9-209ENST00000556170 ARMT1Q9H993 441 aa17.25■□□□□ 0.35
NEK9-209ENST00000556170 GJB4Q9NTQ9 266 aa17.25■□□□□ 0.35
NEK9-209ENST00000556170 CYP7A1P22680 504 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms