RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067	SPATA31A5	Q5VU36	1347 aa		7	□□□□□ -1.29
ATL1-208	ENST00000556067	SPATA31A7	Q8IWB4	1347 aa		7	□□□□□ -1.29
ATL1-208	ENST00000556067	DDX58	O95786	925 aa	Known RBP	6.99	□□□□□ -1.29
ATL1-208	ENST00000556067	CCT4	P50991	539 aa	Known RBP	6.99	□□□□□ -1.29
ATL1-208	ENST00000556067	FKBP5	Q13451	457 aa	Predicted RBP	6.99	□□□□□ -1.29
ATL1-208	ENST00000556067	CENPQ	Q7L2Z9	268 aa	Predicted RBP	6.99	□□□□□ -1.29
ATL1-208	ENST00000556067	FNBP4	Q8N3X1	1017 aa	Predicted RBP	6.99	□□□□□ -1.29
ATL1-208	ENST00000556067	BANK1	Q8NDB2	785 aa		6.99	□□□□□ -1.29
ATL1-208	ENST00000556067	RWDD1	Q9H446	243 aa	Predicted RBP	6.99	□□□□□ -1.29
ATL1-208	ENST00000556067	HYPK	Q9NX55	129 aa		6.99	□□□□□ -1.29
ATL1-208	ENST00000556067	LRRC37A3	O60309	1634 aa		6.98	□□□□□ -1.29
ATL1-208	ENST00000556067	GIGYF1	O75420	1035 aa	Predicted RBP	6.98	□□□□□ -1.29
ATL1-208	ENST00000556067	PTK2	Q05397	1052 aa		6.98	□□□□□ -1.29
ATL1-208	ENST00000556067	FLII	Q13045	1269 aa		6.98	□□□□□ -1.29
ATL1-208	ENST00000556067	SLC39A6	Q13433	755 aa		6.98	□□□□□ -1.29
ATL1-208	ENST00000556067	PDXDC2P	Q6P474	469 aa		6.98	□□□□□ -1.29
ATL1-208	ENST00000556067	SLC4A10	Q6U841	1118 aa		6.98	□□□□□ -1.29
ATL1-208	ENST00000556067	SH3RF1	Q7Z6J0	888 aa		6.98	□□□□□ -1.29
ATL1-208	ENST00000556067	NPM2	Q86SE8	214 aa	Known RBP	6.98	□□□□□ -1.29
ATL1-208	ENST00000556067	TMEM57	Q8N5G2	664 aa		6.98	□□□□□ -1.29
ATL1-208	ENST00000556067	MTMR14	Q8NCE2	650 aa		6.98	□□□□□ -1.29
ATL1-208	ENST00000556067	SYTL4	Q96C24	671 aa	Predicted RBP	6.98	□□□□□ -1.29
ATL1-208	ENST00000556067	GJD4	Q96KN9	370 aa	Predicted RBP	6.98	□□□□□ -1.29
ATL1-208	ENST00000556067	TEX13A	Q9BXU3	409 aa	Predicted RBP	6.98	□□□□□ -1.29
ATL1-208	ENST00000556067	HDAC5	Q9UQL6	1122 aa		6.98	□□□□□ -1.29
ATL1-208	ENST00000556067	KDM6A	O15550	1401 aa	Predicted RBP	6.98	□□□□□ -1.29
ATL1-208	ENST00000556067	SLIT2	O94813	1529 aa		6.97	□□□□□ -1.29
ATL1-208	ENST00000556067	AXIN1	O15169	862 aa		6.97	□□□□□ -1.29
ATL1-208	ENST00000556067	KCNQ3	O43525	872 aa		6.97	□□□□□ -1.29
ATL1-208	ENST00000556067	RLBP1	P12271	317 aa		6.97	□□□□□ -1.29
ATL1-208	ENST00000556067	VASH1	Q7L8A9	365 aa	Predicted RBP	6.97	□□□□□ -1.29
ATL1-208	ENST00000556067	TRPC5	Q9UL62	973 aa	Predicted RBP	6.97	□□□□□ -1.29
ATL1-208	ENST00000556067	ZC3H4	Q9UPT8	1303 aa	Known RBP	6.97	□□□□□ -1.29
ATL1-208	ENST00000556067	PLCH1	Q4KWH8	1693 aa		6.96	□□□□□ -1.29
ATL1-208	ENST00000556067	PKD1L3	Q7Z443	1732 aa		6.96	□□□□□ -1.29
ATL1-208	ENST00000556067	DISP2	A7MBM2	1401 aa		6.96	□□□□□ -1.3
ATL1-208	ENST00000556067	TNS2	Q63HR2	1409 aa		6.96	□□□□□ -1.3
ATL1-208	ENST00000556067	NNT	Q13423	1086 aa		6.96	□□□□□ -1.3
ATL1-208	ENST00000556067	ERFE	Q4G0M1	354 aa		6.96	□□□□□ -1.3
ATL1-208	ENST00000556067	INTS3	Q68E01	1043 aa	Known RBP	6.96	□□□□□ -1.3
ATL1-208	ENST00000556067	SLC10A4	Q96EP9	437 aa		6.96	□□□□□ -1.3
ATL1-208	ENST00000556067	ZNF496	Q96IT1	587 aa	Predicted RBP	6.96	□□□□□ -1.3
ATL1-208	ENST00000556067	DDX21	Q9NR30	783 aa	Known RBP eCLIP	6.96	□□□□□ -1.3
ATL1-208	ENST00000556067	AAAS	Q9NRG9	546 aa		6.96	□□□□□ -1.3
ATL1-208	ENST00000556067	CHPF2	Q9P2E5	772 aa		6.96	□□□□□ -1.3
ATL1-208	ENST00000556067	TNN	Q9UQP3	1299 aa		6.96	□□□□□ -1.3
ATL1-208	ENST00000556067	ABCC4	O15439	1325 aa		6.96	□□□□□ -1.3
ATL1-208	ENST00000556067	AFF2	P51816	1311 aa		6.96	□□□□□ -1.3
ATL1-208	ENST00000556067	NWD2	Q9ULI1	1742 aa		6.96	□□□□□ -1.3
ATL1-208	ENST00000556067	APBB1	O00213	710 aa		6.95	□□□□□ -1.3
ATL1-208	ENST00000556067	PTCD1	O75127	700 aa	Known RBP	6.95	□□□□□ -1.3
ATL1-208	ENST00000556067	STARD3NL	O95772	234 aa		6.95	□□□□□ -1.3
ATL1-208	ENST00000556067	ADH1C	P00326	375 aa		6.95	□□□□□ -1.3
ATL1-208	ENST00000556067	GNAI3	P08754	354 aa		6.95	□□□□□ -1.3
ATL1-208	ENST00000556067	FSHR	P23945	695 aa		6.95	□□□□□ -1.3
ATL1-208	ENST00000556067	NEXN	Q0ZGT2	675 aa		6.95	□□□□□ -1.3
ATL1-208	ENST00000556067	TMEM132A	Q24JP5	1023 aa		6.95	□□□□□ -1.3
ATL1-208	ENST00000556067	G2E3	Q7L622	706 aa		6.95	□□□□□ -1.3
ATL1-208	ENST00000556067	ADAM32	Q8TC27	787 aa		6.95	□□□□□ -1.3
ATL1-208	ENST00000556067	SMARCC1	Q92922	1105 aa	Predicted RBP	6.95	□□□□□ -1.3
ATL1-208	ENST00000556067	C1QTNF2	Q9BXJ5	285 aa		6.95	□□□□□ -1.3
ATL1-208	ENST00000556067	SRCIN1	Q9C0H9	1055 aa		6.95	□□□□□ -1.3
ATL1-208	ENST00000556067	NDUFB9	Q9Y6M9	179 aa		6.95	□□□□□ -1.3
ATL1-208	ENST00000556067	MRC1	P22897	1456 aa		6.95	□□□□□ -1.3
ATL1-208	ENST00000556067	ERBB4	Q15303	1308 aa		6.95	□□□□□ -1.3
ATL1-208	ENST00000556067	HEG1	Q9ULI3	1381 aa		6.95	□□□□□ -1.3
ATL1-208	ENST00000556067	BCL9L	Q86UU0	1499 aa		6.94	□□□□□ -1.3
ATL1-208	ENST00000556067	ZBTB7B	O15156	539 aa	Predicted RBP	6.94	□□□□□ -1.3
ATL1-208	ENST00000556067	HMMR	O75330	724 aa		6.94	□□□□□ -1.3
ATL1-208	ENST00000556067	AVP	P01185	164 aa		6.94	□□□□□ -1.3
ATL1-208	ENST00000556067	MYL6B	P14649	208 aa		6.94	□□□□□ -1.3
ATL1-208	ENST00000556067	RAB15	P59190	212 aa		6.94	□□□□□ -1.3
ATL1-208	ENST00000556067	AIMP1	Q12904	312 aa	Known RBP	6.94	□□□□□ -1.3
ATL1-208	ENST00000556067	CTC1	Q2NKJ3	1217 aa		6.94	□□□□□ -1.3
ATL1-208	ENST00000556067	ZNF772	Q68DY9	489 aa	Predicted RBP	6.94	□□□□□ -1.3
ATL1-208	ENST00000556067	KSR2	Q6VAB6	950 aa		6.94	□□□□□ -1.3
ATL1-208	ENST00000556067	DNAAF4	Q8WXU2	420 aa		6.94	□□□□□ -1.3
ATL1-208	ENST00000556067	PIGB	Q92521	554 aa		6.94	□□□□□ -1.3
ATL1-208	ENST00000556067	CDK15	Q96Q40	435 aa		6.94	□□□□□ -1.3
ATL1-208	ENST00000556067	OCSTAMP	Q9BR26	566 aa		6.94	□□□□□ -1.3
ATL1-208	ENST00000556067	PHAX	Q9H814	394 aa	Known RBP	6.94	□□□□□ -1.3
ATL1-208	ENST00000556067	QTRT2	Q9H974	415 aa	Known RBP	6.94	□□□□□ -1.3
ATL1-208	ENST00000556067	ZBTB40	Q9NUA8	1239 aa		6.94	□□□□□ -1.3
ATL1-208	ENST00000556067	DACH1	Q9UI36	760 aa		6.94	□□□□□ -1.3
ATL1-208	ENST00000556067	ADAMTS7	Q9UKP4	1686 aa		6.93	□□□□□ -1.3
ATL1-208	ENST00000556067	KDM3B	Q7LBC6	1761 aa		6.93	□□□□□ -1.3
ATL1-208	ENST00000556067	SCN11A	Q9UI33	1791 aa		6.93	□□□□□ -1.3
ATL1-208	ENST00000556067	PI4KAP2	A4QPH2	592 aa		6.93	□□□□□ -1.3
ATL1-208	ENST00000556067		F6X3S4	739 aa		6.93	□□□□□ -1.3
ATL1-208	ENST00000556067	GNAI2	P04899	355 aa		6.93	□□□□□ -1.3
ATL1-208	ENST00000556067	HMGB2	P26583	209 aa	Known RBP	6.93	□□□□□ -1.3
ATL1-208	ENST00000556067	WDR4	P57081	412 aa	Known RBP	6.93	□□□□□ -1.3
ATL1-208	ENST00000556067	DZIP3	Q86Y13	1208 aa	Known RBP	6.93	□□□□□ -1.3
ATL1-208	ENST00000556067	RPAP2	Q8IXW5	612 aa	Predicted RBP	6.93	□□□□□ -1.3
ATL1-208	ENST00000556067	PI4KAP1	Q8N8J0	262 aa		6.93	□□□□□ -1.3
ATL1-208	ENST00000556067	MARCH10	Q8NA82	808 aa	Predicted RBP	6.93	□□□□□ -1.3
ATL1-208	ENST00000556067	ACSBG1	Q96GR2	724 aa		6.93	□□□□□ -1.3
ATL1-208	ENST00000556067	TBC1D2B	Q9UPU7	963 aa		6.93	□□□□□ -1.3
ATL1-208	ENST00000556067	NRAP	Q86VF7	1730 aa		6.93	□□□□□ -1.3
ATL1-208	ENST00000556067	LRP6	O75581	1613 aa		6.92	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms