RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 SCARF1Q14162 830 aa22.65■■□□□ 1.22
NPC2-208ENST00000556009 UBE3BQ7Z3V4 1068 aa22.65■■□□□ 1.22
NPC2-208ENST00000556009 CCDC102AQ96A19 550 aa22.65■■□□□ 1.22
NPC2-208ENST00000556009 MRS2Q9HD23 443 aa22.65■■□□□ 1.22
NPC2-208ENST00000556009 FAM155AB1AL88 458 aaPredicted RBP22.64■■□□□ 1.21
NPC2-208ENST00000556009 VAMP4O75379 141 aa22.64■■□□□ 1.21
NPC2-208ENST00000556009 CSF1RP07333 972 aa22.64■■□□□ 1.21
NPC2-208ENST00000556009 CASP7P55210 303 aa22.64■■□□□ 1.21
NPC2-208ENST00000556009 LINS1Q8NG48 757 aa22.64■■□□□ 1.21
NPC2-208ENST00000556009 DNAAF4Q8WXU2 420 aa22.64■■□□□ 1.21
NPC2-208ENST00000556009 MYH16Q9H6N6 1097 aa22.64■■□□□ 1.21
NPC2-208ENST00000556009 MYOZ2Q9NPC6 264 aa22.64■■□□□ 1.21
NPC2-208ENST00000556009 LEMD3Q9Y2U8 911 aa22.64■■□□□ 1.21
NPC2-208ENST00000556009 FANCIQ9NVI1 1328 aa22.63■■□□□ 1.21
NPC2-208ENST00000556009 ZNF316A6NFI3 1004 aaPredicted RBP22.63■■□□□ 1.21
NPC2-208ENST00000556009 IGHMBP2P38935 993 aaKnown RBP22.63■■□□□ 1.21
NPC2-208ENST00000556009 COA1Q9GZY4 146 aa22.63■■□□□ 1.21
NPC2-208ENST00000556009 PITPNM2Q9BZ72 1349 aa22.62■■□□□ 1.21
NPC2-208ENST00000556009 MMP14P50281 582 aa22.62■■□□□ 1.21
NPC2-208ENST00000556009 FKBP5Q13451 457 aaPredicted RBP22.62■■□□□ 1.21
NPC2-208ENST00000556009 ANGEL2Q5VTE6 544 aaKnown RBP22.62■■□□□ 1.21
NPC2-208ENST00000556009 CDCA5Q96FF9 252 aa22.62■■□□□ 1.21
NPC2-208ENST00000556009 ANKRD2Q9GZV1 360 aa22.62■■□□□ 1.21
NPC2-208ENST00000556009 ANP32CO43423 234 aa22.61■■□□□ 1.21
NPC2-208ENST00000556009 ITGA6P23229 1130 aa22.61■■□□□ 1.21
NPC2-208ENST00000556009 ZNF157P51786 506 aaPredicted RBP22.61■■□□□ 1.21
NPC2-208ENST00000556009 DACT2Q5SW24 774 aa22.61■■□□□ 1.21
NPC2-208ENST00000556009 STRIP1Q5VSL9 837 aa22.61■■□□□ 1.21
NPC2-208ENST00000556009 FKBP1BP68106 108 aa22.6■■□□□ 1.21
NPC2-208ENST00000556009 MYO3BQ8WXR4 1341 aa22.59■■□□□ 1.21
NPC2-208ENST00000556009 KIF23Q02241 960 aaPredicted RBP22.59■■□□□ 1.21
NPC2-208ENST00000556009 MPHOSPH8Q99549 860 aa22.59■■□□□ 1.21
NPC2-208ENST00000556009 ZNF804BA4D1E1 1349 aa22.58■■□□□ 1.21
NPC2-208ENST00000556009 SLC10A3P09131 477 aa22.58■■□□□ 1.21
NPC2-208ENST00000556009 EXOSC9Q06265 439 aaKnown RBP22.58■■□□□ 1.21
NPC2-208ENST00000556009 TXNRD3Q86VQ6 643 aa22.58■■□□□ 1.21
NPC2-208ENST00000556009 OGFOD1Q8N543 542 aa22.58■■□□□ 1.21
NPC2-208ENST00000556009 SAGE1Q9NXZ1 904 aa22.58■■□□□ 1.21
NPC2-208ENST00000556009 PAPPA2Q9BXP8 1791 aa22.58■■□□□ 1.2
NPC2-208ENST00000556009 FAM161AQ3B820 660 aa22.57■■□□□ 1.2
NPC2-208ENST00000556009 REM2Q8IYK8 340 aaPredicted RBP22.56■■□□□ 1.2
NPC2-208ENST00000556009 ANKRD18BA2A2Z9 1011 aa22.55■■□□□ 1.2
NPC2-208ENST00000556009 NBPF9Q3BBW0 867 aa22.55■■□□□ 1.2
NPC2-208ENST00000556009 BEND3Q5T5X7 828 aa22.55■■□□□ 1.2
NPC2-208ENST00000556009 TTLL5Q6EMB2 1281 aa22.55■■□□□ 1.2
NPC2-208ENST00000556009 MXD3Q9BW11 206 aa22.55■■□□□ 1.2
NPC2-208ENST00000556009 SCAF8Q9UPN6 1271 aaKnown RBP22.55■■□□□ 1.2
NPC2-208ENST00000556009 SALL2Q9Y467 1007 aaPredicted RBP22.55■■□□□ 1.2
NPC2-208ENST00000556009 FOXO4P98177 505 aa22.54■■□□□ 1.2
NPC2-208ENST00000556009 CHRNDQ07001 517 aa22.54■■□□□ 1.2
NPC2-208ENST00000556009 CSRNP1Q96S65 589 aa22.54■■□□□ 1.2
NPC2-208ENST00000556009 ECM29Q5VYK3 1845 aa22.53■■□□□ 1.2
NPC2-208ENST00000556009 WNT10BO00744 389 aa22.53■■□□□ 1.2
NPC2-208ENST00000556009 C15orf52Q6ZUT6 534 aaKnown RBP22.53■■□□□ 1.2
NPC2-208ENST00000556009 MCOLN1Q9GZU1 580 aa22.53■■□□□ 1.2
NPC2-208ENST00000556009 SPINK5Q9NQ38 1064 aaPredicted RBP22.53■■□□□ 1.2
NPC2-208ENST00000556009 CCDC85CA6NKD9 419 aa22.52■■□□□ 1.2
NPC2-208ENST00000556009 KLRK1P26718 216 aa22.52■■□□□ 1.2
NPC2-208ENST00000556009 RNF186Q9NXI6 227 aa22.52■■□□□ 1.2
NPC2-208ENST00000556009 F6X3S4 739 aa22.51■■□□□ 1.19
NPC2-208ENST00000556009 KCNJ4P48050 445 aa22.51■■□□□ 1.19
NPC2-208ENST00000556009 RGS19P49795 217 aa22.51■■□□□ 1.19
NPC2-208ENST00000556009 IFIT5Q13325 482 aaKnown RBP22.51■■□□□ 1.19
NPC2-208ENST00000556009 RASAL3Q86YV0 1011 aa22.51■■□□□ 1.19
NPC2-208ENST00000556009 FBXW7Q969H0 707 aa22.51■■□□□ 1.19
NPC2-208ENST00000556009 CD209Q9NNX6 404 aa22.51■■□□□ 1.19
NPC2-208ENST00000556009 IRS2Q9Y4H2 1338 aa22.51■■□□□ 1.19
NPC2-208ENST00000556009 GTF2IP78347 998 aa22.5■■□□□ 1.19
NPC2-208ENST00000556009 HDAC9Q9UKV0 1011 aa22.5■■□□□ 1.19
NPC2-208ENST00000556009 TRPA1O75762 1119 aa22.49■■□□□ 1.19
NPC2-208ENST00000556009 DGKZQ13574 1117 aa22.49■■□□□ 1.19
NPC2-208ENST00000556009 ZBED3Q96IU2 234 aaPredicted RBP22.49■■□□□ 1.19
NPC2-208ENST00000556009 PRAMEF18Q5VWM3 479 aa22.48■■□□□ 1.19
NPC2-208ENST00000556009 LMBR1LQ6UX01 489 aa22.48■■□□□ 1.19
NPC2-208ENST00000556009 MOB2Q70IA6 237 aa22.48■■□□□ 1.19
NPC2-208ENST00000556009 UBE2Q2LH0YL09 131 aa22.47■■□□□ 1.19
NPC2-208ENST00000556009 GRM8O00222 908 aa22.47■■□□□ 1.19
NPC2-208ENST00000556009 ALDH1L1O75891 902 aa22.47■■□□□ 1.19
NPC2-208ENST00000556009 NF2P35240 595 aa22.47■■□□□ 1.19
NPC2-208ENST00000556009 KIAA0825Q8IV33 1275 aa22.47■■□□□ 1.19
NPC2-208ENST00000556009 TAF5LO75529 589 aa22.46■■□□□ 1.19
NPC2-208ENST00000556009 SASH1O94885 1247 aa22.46■■□□□ 1.19
NPC2-208ENST00000556009 IL1R1P14778 569 aa22.46■■□□□ 1.19
NPC2-208ENST00000556009 CCDC57Q2TAC2 916 aa22.46■■□□□ 1.19
NPC2-208ENST00000556009 EPHA10Q5JZY3 1008 aa22.46■■□□□ 1.19
NPC2-208ENST00000556009 APOBEC3FQ8IUX4 373 aaKnown RBP22.46■■□□□ 1.19
NPC2-208ENST00000556009 HELBQ8NG08 1087 aaPredicted RBP22.46■■□□□ 1.19
NPC2-208ENST00000556009 SNAP23O00161 211 aa22.45■■□□□ 1.18
NPC2-208ENST00000556009 FKBP1AP62942 108 aaKnown RBP22.45■■□□□ 1.18
NPC2-208ENST00000556009 FAM9BQ8IZU0 186 aa22.45■■□□□ 1.18
NPC2-208ENST00000556009 MTMR14Q8NCE2 650 aa22.45■■□□□ 1.18
NPC2-208ENST00000556009 CHMP3Q9Y3E7 222 aa22.45■■□□□ 1.18
NPC2-208ENST00000556009 LDHAL6AQ6ZMR3 332 aa22.44■■□□□ 1.18
NPC2-208ENST00000556009 ZNF804AQ7Z570 1209 aa22.44■■□□□ 1.18
NPC2-208ENST00000556009 CERS5Q8N5B7 392 aa22.44■■□□□ 1.18
NPC2-208ENST00000556009 C9orf78Q9NZ63 289 aaPredicted RBP22.44■■□□□ 1.18
NPC2-208ENST00000556009 TTLL12Q14166 644 aaPredicted RBP22.43■■□□□ 1.18
NPC2-208ENST00000556009 DLGAP5Q15398 846 aa22.43■■□□□ 1.18
NPC2-208ENST00000556009 SRCIN1Q9C0H9 1055 aa22.43■■□□□ 1.18
NPC2-208ENST00000556009 LAMB1P07942 1786 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms