RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 PTPN12Q05209 780 aaKnown RBP24.58■■□□□ 1.53
SUPT16H-203ENST00000555752 FBXO46Q6PJ61 603 aaPredicted RBP24.58■■□□□ 1.53
SUPT16H-203ENST00000555752 CWC25Q9NXE8 425 aaPredicted RBP24.58■■□□□ 1.53
SUPT16H-203ENST00000555752 TXNRD3Q86VQ6 643 aa24.56■■□□□ 1.52
SUPT16H-203ENST00000555752 MINPP1Q9UNW1 487 aa24.56■■□□□ 1.52
SUPT16H-203ENST00000555752 FZD1Q9UP38 647 aa24.56■■□□□ 1.52
SUPT16H-203ENST00000555752 MED23Q9ULK4 1368 aa24.55■■□□□ 1.52
SUPT16H-203ENST00000555752 ADAMTS8Q9UP79 889 aa24.55■■□□□ 1.52
SUPT16H-203ENST00000555752 FKTNO75072 461 aa24.54■■□□□ 1.52
SUPT16H-203ENST00000555752 ZNF853P0CG23 659 aa24.54■■□□□ 1.52
SUPT16H-203ENST00000555752 CTSWP56202 376 aa24.54■■□□□ 1.52
SUPT16H-203ENST00000555752 NOM1Q5C9Z4 860 aaKnown RBP24.54■■□□□ 1.52
SUPT16H-203ENST00000555752 OGFOD1Q8N543 542 aa24.54■■□□□ 1.52
SUPT16H-203ENST00000555752 METTL22Q9BUU2 404 aaPredicted RBP24.54■■□□□ 1.52
SUPT16H-203ENST00000555752 NF2P35240 595 aa24.53■■□□□ 1.52
SUPT16H-203ENST00000555752 SREBF2Q12772 1141 aa24.53■■□□□ 1.52
SUPT16H-203ENST00000555752 WDR43Q15061 677 aaKnown RBP eCLIP24.53■■□□□ 1.52
SUPT16H-203ENST00000555752 GREM2Q9H772 168 aa24.53■■□□□ 1.52
SUPT16H-203ENST00000555752 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.53■■□□□ 1.52
SUPT16H-203ENST00000555752 MKI67P46013 3256 aaKnown RBP24.52■■□□□ 1.52
SUPT16H-203ENST00000555752 CCT4P50991 539 aaKnown RBP24.52■■□□□ 1.52
SUPT16H-203ENST00000555752 TTLL11Q8NHH1 800 aa24.52■■□□□ 1.52
SUPT16H-203ENST00000555752 CDC5LQ99459 802 aaKnown RBP24.52■■□□□ 1.52
SUPT16H-203ENST00000555752 MYBBP1AQ9BQG0 1328 aaKnown RBP24.52■■□□□ 1.52
SUPT16H-203ENST00000555752 HTTP42858 3142 aa24.51■■□□□ 1.51
SUPT16H-203ENST00000555752 KLRK1P26718 216 aa24.51■■□□□ 1.51
SUPT16H-203ENST00000555752 STRIP1Q5VSL9 837 aa24.51■■□□□ 1.51
SUPT16H-203ENST00000555752 ARMC9Q7Z3E5 817 aa24.51■■□□□ 1.51
SUPT16H-203ENST00000555752 C8orf58Q8NAV2 365 aa24.51■■□□□ 1.51
SUPT16H-203ENST00000555752 CFHR5Q9BXR6 569 aa24.51■■□□□ 1.51
SUPT16H-203ENST00000555752 BSDC1Q9NW68 430 aaPredicted RBP24.51■■□□□ 1.51
SUPT16H-203ENST00000555752 MAP3K2Q9Y2U5 619 aa24.51■■□□□ 1.51
SUPT16H-203ENST00000555752 IGKV5-2P06315 115 aa24.5■■□□□ 1.51
SUPT16H-203ENST00000555752 LDLRAD1Q5T700 205 aa24.5■■□□□ 1.51
SUPT16H-203ENST00000555752 SPRYD7Q5W111 196 aa24.5■■□□□ 1.51
SUPT16H-203ENST00000555752 KIAA0825Q8IV33 1275 aa24.5■■□□□ 1.51
SUPT16H-203ENST00000555752 ANGEL1Q9UNK9 670 aaKnown RBP24.5■■□□□ 1.51
SUPT16H-203ENST00000555752 MYH3P11055 1940 aa24.49■■□□□ 1.51
SUPT16H-203ENST00000555752 COA1Q9GZY4 146 aa24.49■■□□□ 1.51
SUPT16H-203ENST00000555752 MYO3BQ8WXR4 1341 aa24.49■■□□□ 1.51
SUPT16H-203ENST00000555752 POTEFA5A3E0 1075 aa24.47■■□□□ 1.51
SUPT16H-203ENST00000555752 TTLL5Q6EMB2 1281 aa24.47■■□□□ 1.51
SUPT16H-203ENST00000555752 APOBEC3FQ8IUX4 373 aaKnown RBP24.47■■□□□ 1.51
SUPT16H-203ENST00000555752 TRIM17Q9Y577 477 aa24.47■■□□□ 1.51
SUPT16H-203ENST00000555752 CENPFP49454 3210 aa24.46■■□□□ 1.51
SUPT16H-203ENST00000555752 DDX58O95786 925 aaKnown RBP24.46■■□□□ 1.51
SUPT16H-203ENST00000555752 ZBED3Q96IU2 234 aaPredicted RBP24.46■■□□□ 1.51
SUPT16H-203ENST00000555752 CLMNQ96JQ2 1002 aa24.46■■□□□ 1.51
SUPT16H-203ENST00000555752 IFT57Q9NWB7 429 aa24.46■■□□□ 1.51
SUPT16H-203ENST00000555752 PI4KAP2A4QPH2 592 aa24.45■■□□□ 1.5
SUPT16H-203ENST00000555752 GTF2IP78347 998 aa24.45■■□□□ 1.5
SUPT16H-203ENST00000555752 CWF19L2Q2TBE0 894 aaKnown RBP24.45■■□□□ 1.5
SUPT16H-203ENST00000555752 OTOP1Q7RTM1 612 aa24.45■■□□□ 1.5
SUPT16H-203ENST00000555752 IFNL1Q8IU54 200 aa24.45■■□□□ 1.5
SUPT16H-203ENST00000555752 PI4KAP1Q8N8J0 262 aa24.45■■□□□ 1.5
SUPT16H-203ENST00000555752 PCDHAC2Q9Y5I4 1007 aa24.45■■□□□ 1.5
SUPT16H-203ENST00000555752 SSC5DA1L4H1 1573 aa24.45■■□□□ 1.5
SUPT16H-203ENST00000555752 IGF2BP3O00425 579 aaKnown RBP eCLIP24.44■■□□□ 1.5
SUPT16H-203ENST00000555752 GNAI1P63096 354 aa24.44■■□□□ 1.5
SUPT16H-203ENST00000555752 TSPYL6Q8N831 410 aa24.44■■□□□ 1.5
SUPT16H-203ENST00000555752 DEFB129Q9H1M3 183 aa24.44■■□□□ 1.5
SUPT16H-203ENST00000555752 ZNF804BA4D1E1 1349 aa24.43■■□□□ 1.5
SUPT16H-203ENST00000555752 APAF1O14727 1248 aa24.43■■□□□ 1.5
SUPT16H-203ENST00000555752 HABP4Q5JVS0 413 aaKnown RBP24.43■■□□□ 1.5
SUPT16H-203ENST00000555752 KSR2Q6VAB6 950 aa24.43■■□□□ 1.5
SUPT16H-203ENST00000555752 SLC10A4Q96EP9 437 aa24.43■■□□□ 1.5
SUPT16H-203ENST00000555752 LEMD3Q9Y2U8 911 aa24.43■■□□□ 1.5
SUPT16H-203ENST00000555752 BRCA2P51587 3418 aa24.42■■□□□ 1.5
SUPT16H-203ENST00000555752 ALDH1A1P00352 501 aa24.42■■□□□ 1.5
SUPT16H-203ENST00000555752 CCDC30Q5VVM6 783 aa24.42■■□□□ 1.5
SUPT16H-203ENST00000555752 UBE3BQ7Z3V4 1068 aa24.42■■□□□ 1.5
SUPT16H-203ENST00000555752 GCC1Q96CN9 775 aa24.42■■□□□ 1.5
SUPT16H-203ENST00000555752 MANSC4A6NHS7 340 aaPredicted RBP24.41■■□□□ 1.5
SUPT16H-203ENST00000555752 DDX10Q13206 875 aaKnown RBP24.41■■□□□ 1.5
SUPT16H-203ENST00000555752 CERS5Q8N5B7 392 aa24.41■■□□□ 1.5
SUPT16H-203ENST00000555752 WNK4Q96J92 1243 aa24.41■■□□□ 1.5
SUPT16H-203ENST00000555752 NEURL1BA8MQ27 555 aa24.4■■□□□ 1.5
SUPT16H-203ENST00000555752 SNAP23O00161 211 aa24.4■■□□□ 1.5
SUPT16H-203ENST00000555752 IGHMBP2P38935 993 aaKnown RBP24.4■■□□□ 1.5
SUPT16H-203ENST00000555752 AOX1Q06278 1338 aa24.39■■□□□ 1.5
SUPT16H-203ENST00000555752 H7C1W4 665 aa24.39■■□□□ 1.49
SUPT16H-203ENST00000555752 ITGA6P23229 1130 aa24.39■■□□□ 1.49
SUPT16H-203ENST00000555752 CAP1Q01518 475 aa24.39■■□□□ 1.49
SUPT16H-203ENST00000555752 DLGAP5Q15398 846 aa24.39■■□□□ 1.49
SUPT16H-203ENST00000555752 MAP3K11Q16584 847 aa24.39■■□□□ 1.49
SUPT16H-203ENST00000555752 CD99L2Q8TCZ2 262 aa24.39■■□□□ 1.49
SUPT16H-203ENST00000555752 LAMB1P07942 1786 aa24.39■■□□□ 1.49
SUPT16H-203ENST00000555752 COL1A1P02452 1464 aaPredicted RBP24.38■■□□□ 1.49
SUPT16H-203ENST00000555752 CLRN2A0PK11 232 aa24.38■■□□□ 1.49
SUPT16H-203ENST00000555752 MMP14P50281 582 aa24.38■■□□□ 1.49
SUPT16H-203ENST00000555752 INHBEP58166 350 aa24.38■■□□□ 1.49
SUPT16H-203ENST00000555752 G2E3Q7L622 706 aa24.38■■□□□ 1.49
SUPT16H-203ENST00000555752 CD209Q9NNX6 404 aa24.38■■□□□ 1.49
SUPT16H-203ENST00000555752 F8W031 263 aaPredicted RBP24.37■■□□□ 1.49
SUPT16H-203ENST00000555752 ZBTB48P10074 688 aaPredicted RBP24.37■■□□□ 1.49
SUPT16H-203ENST00000555752 GJA5P36382 358 aa24.37■■□□□ 1.49
SUPT16H-203ENST00000555752 NEXNQ0ZGT2 675 aa24.37■■□□□ 1.49
SUPT16H-203ENST00000555752 CRHR2Q13324 411 aa24.37■■□□□ 1.49
SUPT16H-203ENST00000555752 ANKRD2Q9GZV1 360 aa24.37■■□□□ 1.49
SUPT16H-203ENST00000555752 PTPN22Q9Y2R2 807 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms