RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 GGA3Q9NZ52 723 aa19.54■□□□□ 0.72
SNX6-205ENST00000555648 E9PSI1 815 aa19.53■□□□□ 0.72
SNX6-205ENST00000555648 CAPN15O75808 1086 aa19.53■□□□□ 0.72
SNX6-205ENST00000555648 ALDH1L1O75891 902 aa19.53■□□□□ 0.72
SNX6-205ENST00000555648 ZNF280AP59817 542 aaPredicted RBP19.53■□□□□ 0.72
SNX6-205ENST00000555648 C2orf69Q8N8R5 385 aa19.53■□□□□ 0.72
SNX6-205ENST00000555648 HHIPL1Q96JK4 782 aa19.53■□□□□ 0.72
SNX6-205ENST00000555648 PRDM10Q9NQV6 1147 aa19.53■□□□□ 0.72
SNX6-205ENST00000555648 WTIPA6NIX2 430 aaPredicted RBP19.52■□□□□ 0.72
SNX6-205ENST00000555648 MAP2K2P36507 400 aa19.52■□□□□ 0.72
SNX6-205ENST00000555648 CHRNDQ07001 517 aa19.52■□□□□ 0.72
SNX6-205ENST00000555648 SCARF1Q14162 830 aa19.52■□□□□ 0.72
SNX6-205ENST00000555648 LMBR1LQ6UX01 489 aa19.52■□□□□ 0.72
SNX6-205ENST00000555648 MYOZ2Q9NPC6 264 aa19.52■□□□□ 0.72
SNX6-205ENST00000555648 MYO3BQ8WXR4 1341 aa19.51■□□□□ 0.71
SNX6-205ENST00000555648 ADM5C9JUS6 153 aa19.51■□□□□ 0.71
SNX6-205ENST00000555648 LBX1P52954 281 aa19.51■□□□□ 0.71
SNX6-205ENST00000555648 HUNKP57058 714 aa19.51■□□□□ 0.71
SNX6-205ENST00000555648 FOXO4P98177 505 aa19.51■□□□□ 0.71
SNX6-205ENST00000555648 STRIP1Q5VSL9 837 aa19.51■□□□□ 0.71
SNX6-205ENST00000555648 GBA2Q9HCG7 927 aaPredicted RBP19.51■□□□□ 0.71
SNX6-205ENST00000555648 ZNF521Q96K83 1311 aa19.51■□□□□ 0.71
SNX6-205ENST00000555648 ANGEL2Q5VTE6 544 aaKnown RBP19.5■□□□□ 0.71
SNX6-205ENST00000555648 CNNM1Q9NRU3 951 aa19.5■□□□□ 0.71
SNX6-205ENST00000555648 HDAC9Q9UKV0 1011 aa19.5■□□□□ 0.71
SNX6-205ENST00000555648 AOC2O75106 756 aa19.49■□□□□ 0.71
SNX6-205ENST00000555648 TTLL5Q6EMB2 1281 aa19.49■□□□□ 0.71
SNX6-205ENST00000555648 GMLQ99445 158 aa19.49■□□□□ 0.71
SNX6-205ENST00000555648 TAF5LO75529 589 aa19.48■□□□□ 0.71
SNX6-205ENST00000555648 DACT2Q5SW24 774 aa19.48■□□□□ 0.71
SNX6-205ENST00000555648 DLK2Q6UY11 383 aa19.48■□□□□ 0.71
SNX6-205ENST00000555648 LDHAL6AQ6ZMR3 332 aa19.48■□□□□ 0.71
SNX6-205ENST00000555648 TXNRD3Q86VQ6 643 aa19.48■□□□□ 0.71
SNX6-205ENST00000555648 HELBQ8NG08 1087 aaPredicted RBP19.48■□□□□ 0.71
SNX6-205ENST00000555648 ZNF609O15014 1411 aa19.48■□□□□ 0.71
SNX6-205ENST00000555648 PLIN1O60240 522 aa19.47■□□□□ 0.71
SNX6-205ENST00000555648 HSPA8P11142 646 aaKnown RBP19.47■□□□□ 0.71
SNX6-205ENST00000555648 MMP14P50281 582 aa19.47■□□□□ 0.71
SNX6-205ENST00000555648 GTF2IP78347 998 aa19.47■□□□□ 0.71
SNX6-205ENST00000555648 NOGQ13253 232 aa19.47■□□□□ 0.71
SNX6-205ENST00000555648 MXD3Q9BW11 206 aa19.47■□□□□ 0.71
SNX6-205ENST00000555648 ASTN2O75129 1339 aaPredicted RBP19.47■□□□□ 0.71
SNX6-205ENST00000555648 KLRK1P26718 216 aa19.46■□□□□ 0.71
SNX6-205ENST00000555648 RGMBQ6NW40 437 aa19.46■□□□□ 0.71
SNX6-205ENST00000555648 ZNF804AQ7Z570 1209 aa19.46■□□□□ 0.71
SNX6-205ENST00000555648 MRPL50Q8N5N7 158 aaKnown RBP19.46■□□□□ 0.71
SNX6-205ENST00000555648 CDCA5Q96FF9 252 aa19.46■□□□□ 0.71
SNX6-205ENST00000555648 PTPRCP08575 1304 aa19.46■□□□□ 0.71
SNX6-205ENST00000555648 CA12O43570 354 aa19.45■□□□□ 0.7
SNX6-205ENST00000555648 SLFN5Q08AF3 891 aa19.45■□□□□ 0.7
SNX6-205ENST00000555648 EPHA10Q5JZY3 1008 aa19.45■□□□□ 0.7
SNX6-205ENST00000555648 CCDC102AQ96A19 550 aa19.45■□□□□ 0.7
SNX6-205ENST00000555648 ZNF594Q96JF6 807 aaPredicted RBP19.45■□□□□ 0.7
SNX6-205ENST00000555648 CD209Q9NNX6 404 aa19.45■□□□□ 0.7
SNX6-205ENST00000555648 PITPNM2Q9BZ72 1349 aa19.45■□□□□ 0.7
SNX6-205ENST00000555648 TRPM7Q96QT4 1865 aa19.44■□□□□ 0.7
SNX6-205ENST00000555648 ZNF157P51786 506 aaPredicted RBP19.44■□□□□ 0.7
SNX6-205ENST00000555648 BRPF1P55201 1214 aaPredicted RBP19.44■□□□□ 0.7
SNX6-205ENST00000555648 KIAA0825Q8IV33 1275 aa19.44■□□□□ 0.7
SNX6-205ENST00000555648 SUCLG2Q96I99 432 aa19.44■□□□□ 0.7
SNX6-205ENST00000555648 MYH3P11055 1940 aa19.43■□□□□ 0.7
SNX6-205ENST00000555648 CACNA1FO60840 1977 aa19.43■□□□□ 0.7
SNX6-205ENST00000555648 NF2P35240 595 aa19.43■□□□□ 0.7
SNX6-205ENST00000555648 C15orf52Q6ZUT6 534 aaKnown RBP19.43■□□□□ 0.7
SNX6-205ENST00000555648 SSH1Q8WYL5 1049 aa19.43■□□□□ 0.7
SNX6-205ENST00000555648 SNAP23O00161 211 aa19.42■□□□□ 0.7
SNX6-205ENST00000555648 NBPF7P0C2Y1 421 aaPredicted RBP19.42■□□□□ 0.7
SNX6-205ENST00000555648 NBPF9Q3BBW0 867 aa19.42■□□□□ 0.7
SNX6-205ENST00000555648 SCN9AQ15858 1988 aa19.42■□□□□ 0.7
SNX6-205ENST00000555648 CCER2I3L3R5 266 aa19.41■□□□□ 0.7
SNX6-205ENST00000555648 WNT10BO00744 389 aa19.41■□□□□ 0.7
SNX6-205ENST00000555648 FKBP1BP68106 108 aa19.41■□□□□ 0.7
SNX6-205ENST00000555648 TTLL12Q14166 644 aaPredicted RBP19.41■□□□□ 0.7
SNX6-205ENST00000555648 SMC4Q9NTJ3 1288 aa19.41■□□□□ 0.7
SNX6-205ENST00000555648 SASH1O94885 1247 aa19.4■□□□□ 0.7
SNX6-205ENST00000555648 DLGAP5Q15398 846 aa19.4■□□□□ 0.7
SNX6-205ENST00000555648 ALDH1L2Q3SY69 923 aa19.4■□□□□ 0.7
SNX6-205ENST00000555648 BICC1Q9H694 974 aaKnown RBP19.4■□□□□ 0.7
SNX6-205ENST00000555648 TSKSQ9UJT2 592 aa19.4■□□□□ 0.7
SNX6-205ENST00000555648 UBE4AQ14139 1066 aa19.39■□□□□ 0.69
SNX6-205ENST00000555648 VPS37DQ86XT2 251 aa19.39■□□□□ 0.69
SNX6-205ENST00000555648 APOBEC3FQ8IUX4 373 aaKnown RBP19.39■□□□□ 0.69
SNX6-205ENST00000555648 CDCA7LQ96GN5 454 aa19.39■□□□□ 0.69
SNX6-205ENST00000555648 SCAF8Q9UPN6 1271 aaKnown RBP19.39■□□□□ 0.69
SNX6-205ENST00000555648 UTYO14607 1347 aa19.39■□□□□ 0.69
SNX6-205ENST00000555648 F8W031 263 aaPredicted RBP19.38■□□□□ 0.69
SNX6-205ENST00000555648 MYO1BO43795 1136 aa19.38■□□□□ 0.69
SNX6-205ENST00000555648 IL1R1P14778 569 aa19.38■□□□□ 0.69
SNX6-205ENST00000555648 MROH5Q6ZUA9 1318 aa19.38■□□□□ 0.69
SNX6-205ENST00000555648 SPEF2Q9C093 1822 aa19.38■□□□□ 0.69
SNX6-205ENST00000555648 CT47B1P0C2W7 299 aaPredicted RBP19.37■□□□□ 0.69
SNX6-205ENST00000555648 HIBADHP31937 336 aaKnown RBP19.37■□□□□ 0.69
SNX6-205ENST00000555648 KIF23Q02241 960 aaPredicted RBP19.37■□□□□ 0.69
SNX6-205ENST00000555648 METTL24Q5JXM2 366 aa19.37■□□□□ 0.69
SNX6-205ENST00000555648 PRAMEF18Q5VWM3 479 aa19.37■□□□□ 0.69
SNX6-205ENST00000555648 RBM5P52756 815 aaKnown RBP eCLIP19.36■□□□□ 0.69
SNX6-205ENST00000555648 FKBP1AP62942 108 aaKnown RBP19.36■□□□□ 0.69
SNX6-205ENST00000555648 KAZALD1Q96I82 304 aa19.36■□□□□ 0.69
SNX6-205ENST00000555648 ZIC5Q96T25 663 aa19.36■□□□□ 0.69
SNX6-205ENST00000555648 PUS3Q9BZE2 481 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms