RNA–Protein interactions for RNA: ENST00000555548.1

PAX3-210, Transcript of paired box 3, humanhuman

TSL 4

Gene PAX3, Length 458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-210ENST00000555548 MICAL1Q8TDZ2 1067 aa9.57□□□□□ -0.88
PAX3-210ENST00000555548 ANAPC16Q96DE5 110 aa9.57□□□□□ -0.88
PAX3-210ENST00000555548 SRRTQ9BXP5 876 aaKnown RBP9.57□□□□□ -0.88
PAX3-210ENST00000555548 UBP1Q9NZI7 540 aa9.57□□□□□ -0.88
PAX3-210ENST00000555548 TLR6Q9Y2C9 796 aa9.57□□□□□ -0.88
PAX3-210ENST00000555548 FAM221BA6H8Z2 402 aa9.56□□□□□ -0.88
PAX3-210ENST00000555548 MARCH6O60337 910 aa9.56□□□□□ -0.88
PAX3-210ENST00000555548 GDF9O60383 454 aa9.56□□□□□ -0.88
PAX3-210ENST00000555548 APOBRQ0VD83 1088 aa9.56□□□□□ -0.88
PAX3-210ENST00000555548 TPTE2Q6XPS3 522 aa9.56□□□□□ -0.88
PAX3-210ENST00000555548 SLITRK4Q8IW52 837 aa9.56□□□□□ -0.88
PAX3-210ENST00000555548 GOLM1Q8NBJ4 401 aa9.56□□□□□ -0.88
PAX3-210ENST00000555548 HPS1Q92902 700 aa9.56□□□□□ -0.88
PAX3-210ENST00000555548 NKD1Q969G9 470 aa9.56□□□□□ -0.88
PAX3-210ENST00000555548 SHDQ96IW2 340 aa9.56□□□□□ -0.88
PAX3-210ENST00000555548 KCNH4Q9UQ05 1017 aa9.56□□□□□ -0.88
PAX3-210ENST00000555548 R3HCC1Q9Y3T6 440 aaKnown RBP9.56□□□□□ -0.88
PAX3-210ENST00000555548 BICRAQ9NZM4 1560 aa9.55□□□□□ -0.88
PAX3-210ENST00000555548 MMP20O60882 483 aa9.55□□□□□ -0.88
PAX3-210ENST00000555548 CELA3AP09093 270 aa9.55□□□□□ -0.88
PAX3-210ENST00000555548 RHOQP17081 205 aa9.55□□□□□ -0.88
PAX3-210ENST00000555548 ANAPC15P60006 121 aa9.55□□□□□ -0.88
PAX3-210ENST00000555548 CCINQ13939 588 aa9.55□□□□□ -0.88
PAX3-210ENST00000555548 IFFO2Q5TF58 517 aa9.55□□□□□ -0.88
PAX3-210ENST00000555548 AGMOQ6ZNB7 445 aa9.55□□□□□ -0.88
PAX3-210ENST00000555548 GSX2Q9BZM3 304 aa9.55□□□□□ -0.88
PAX3-210ENST00000555548 METTL14Q9HCE5 456 aaKnown RBP9.55□□□□□ -0.88
PAX3-210ENST00000555548 COL4A3BPQ9Y5P4 624 aa9.55□□□□□ -0.88
PAX3-210ENST00000555548 ROBO2Q9HCK4 1378 aa9.54□□□□□ -0.88
PAX3-210ENST00000555548 BMP2P12643 396 aa9.54□□□□□ -0.88
PAX3-210ENST00000555548 CRKP46108 304 aa9.54□□□□□ -0.88
PAX3-210ENST00000555548 GRIN2CQ14957 1233 aa9.54□□□□□ -0.88
PAX3-210ENST00000555548 TNNI3KQ59H18 835 aa9.54□□□□□ -0.88
PAX3-210ENST00000555548 FAM196AQ6ZSG2 479 aa9.54□□□□□ -0.88
PAX3-210ENST00000555548 RNF166Q96A37 237 aaPredicted RBP9.54□□□□□ -0.88
PAX3-210ENST00000555548 CNTNAP3BQ96NU0 1288 aa9.54□□□□□ -0.88
PAX3-210ENST00000555548 ZKSCAN3Q9BRR0 538 aa9.54□□□□□ -0.88
PAX3-210ENST00000555548 CNTNAP3Q9BZ76 1288 aa9.54□□□□□ -0.88
PAX3-210ENST00000555548 CCDC113Q9H0I3 377 aa9.54□□□□□ -0.88
PAX3-210ENST00000555548 RUBCNLQ9H714 662 aa9.54□□□□□ -0.88
PAX3-210ENST00000555548 IFT57Q9NWB7 429 aa9.54□□□□□ -0.88
PAX3-210ENST00000555548 MSRB2Q9Y3D2 182 aa9.54□□□□□ -0.88
PAX3-210ENST00000555548 SMAD7O15105 426 aaKnown RBP9.53□□□□□ -0.88
PAX3-210ENST00000555548 CAPN5O15484 640 aaPredicted RBP9.53□□□□□ -0.88
PAX3-210ENST00000555548 KIF4AO95239 1232 aa9.53□□□□□ -0.88
PAX3-210ENST00000555548 TFE3P19532 575 aaPredicted RBP9.53□□□□□ -0.88
PAX3-210ENST00000555548 ITPKAP23677 461 aa9.53□□□□□ -0.88
PAX3-210ENST00000555548 TARSP26639 723 aaKnown RBP9.53□□□□□ -0.88
PAX3-210ENST00000555548 RPS26P62854 115 aaKnown RBP9.53□□□□□ -0.88
PAX3-210ENST00000555548 FILIP1Q7Z7B0 1213 aa9.53□□□□□ -0.88
PAX3-210ENST00000555548 LRRC3Q9BY71 257 aa9.53□□□□□ -0.88
PAX3-210ENST00000555548 UNC13AQ9UPW8 1703 aa9.53□□□□□ -0.88
PAX3-210ENST00000555548 ENC1O14682 589 aa9.52□□□□□ -0.89
PAX3-210ENST00000555548 DNAJC6O75061 913 aa9.52□□□□□ -0.89
PAX3-210ENST00000555548 HOXD8P13378 290 aaPredicted RBP9.52□□□□□ -0.89
PAX3-210ENST00000555548 TTBK2Q6IQ55 1244 aa9.52□□□□□ -0.89
PAX3-210ENST00000555548 KRT25Q7Z3Z0 450 aa9.52□□□□□ -0.89
PAX3-210ENST00000555548 PGBD3Q8N328 593 aa9.52□□□□□ -0.89
PAX3-210ENST00000555548 NECAB3Q96P71 396 aaPredicted RBP9.52□□□□□ -0.89
PAX3-210ENST00000555548 OSMRQ99650 979 aa9.52□□□□□ -0.89
PAX3-210ENST00000555548 TMX1Q9H3N1 280 aa9.52□□□□□ -0.89
PAX3-210ENST00000555548 GPAMQ9HCL2 828 aa9.52□□□□□ -0.89
PAX3-210ENST00000555548 PCDH12Q9NPG4 1184 aa9.52□□□□□ -0.89
PAX3-210ENST00000555548 DZANK1Q9NVP4 752 aa9.52□□□□□ -0.89
PAX3-210ENST00000555548 ZFATQ9P243 1243 aa9.52□□□□□ -0.89
PAX3-210ENST00000555548 F11P03951 625 aa9.51□□□□□ -0.89
PAX3-210ENST00000555548 SOX18P35713 384 aa9.51□□□□□ -0.89
PAX3-210ENST00000555548 GRIA4P48058 902 aa9.51□□□□□ -0.89
PAX3-210ENST00000555548 CHMP4BP1P59074 171 aa9.51□□□□□ -0.89
PAX3-210ENST00000555548 HYAL2Q12891 473 aa9.51□□□□□ -0.89
PAX3-210ENST00000555548 CCDC84Q86UT8 332 aaPredicted RBP9.51□□□□□ -0.89
PAX3-210ENST00000555548 SH3TC2Q8TF17 1288 aa9.51□□□□□ -0.89
PAX3-210ENST00000555548 SPC25Q9HBM1 224 aa9.51□□□□□ -0.89
PAX3-210ENST00000555548 PPT2Q9UMR5 302 aa9.51□□□□□ -0.89
PAX3-210ENST00000555548 DYRK1BQ9Y463 629 aa9.51□□□□□ -0.89
PAX3-210ENST00000555548 PRKAB1Q9Y478 270 aa9.51□□□□□ -0.89
PAX3-210ENST00000555548 CECR2Q9BXF3 1484 aa9.51□□□□□ -0.89
PAX3-210ENST00000555548 TTLL8A6PVC2 850 aa9.5□□□□□ -0.89
PAX3-210ENST00000555548 TNFRSF10AO00220 468 aa9.5□□□□□ -0.89
PAX3-210ENST00000555548 EFSO43281 561 aa9.5□□□□□ -0.89
PAX3-210ENST00000555548 CDC45O75419 566 aa9.5□□□□□ -0.89
PAX3-210ENST00000555548 FAM157BP0CG42 384 aa9.5□□□□□ -0.89
PAX3-210ENST00000555548 RARAP10276 462 aa9.5□□□□□ -0.89
PAX3-210ENST00000555548 GIPRP48546 466 aa9.5□□□□□ -0.89
PAX3-210ENST00000555548 SFSWAPQ12872 951 aaKnown RBP9.5□□□□□ -0.89
PAX3-210ENST00000555548 SEZ6Q53EL9 994 aa9.5□□□□□ -0.89
PAX3-210ENST00000555548 RPS26P11Q5JNZ5 115 aaPredicted RBP9.5□□□□□ -0.89
PAX3-210ENST00000555548 COL13A1Q5TAT6 717 aaPredicted RBP9.5□□□□□ -0.89
PAX3-210ENST00000555548 CCDC81Q6ZN84 652 aa9.5□□□□□ -0.89
PAX3-210ENST00000555548 NOL8Q76FK4 1167 aaKnown RBP9.5□□□□□ -0.89
PAX3-210ENST00000555548 NCAPG2Q86XI2 1143 aa9.5□□□□□ -0.89
PAX3-210ENST00000555548 TRIM42Q8IWZ5 723 aa9.5□□□□□ -0.89
PAX3-210ENST00000555548 BHLHE41Q9C0J9 482 aaPredicted RBP9.5□□□□□ -0.89
PAX3-210ENST00000555548 TLR7Q9NYK1 1049 aaKnown RBP9.5□□□□□ -0.89
PAX3-210ENST00000555548 PPP1R12AO14974 1030 aaPredicted RBP9.49□□□□□ -0.89
PAX3-210ENST00000555548 PSAPP07602 524 aa9.49□□□□□ -0.89
PAX3-210ENST00000555548 EIF6P56537 245 aaKnown RBP9.49□□□□□ -0.89
PAX3-210ENST00000555548 SPRED3Q2MJR0 410 aa9.49□□□□□ -0.89
PAX3-210ENST00000555548 C6orf118Q5T5N4 469 aa9.49□□□□□ -0.89
PAX3-210ENST00000555548 LILRB2Q8N423 598 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms