RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 FER1L4A9Z1Z3 1794 aa8.97□□□□□ -0.97
LINC00643-203ENST00000555518 ELNP15502 786 aa8.97□□□□□ -0.97
LINC00643-203ENST00000555518 TRAPPC3LQ5T215 181 aa8.97□□□□□ -0.97
LINC00643-203ENST00000555518 ARTNQ5T4W7 220 aa8.97□□□□□ -0.97
LINC00643-203ENST00000555518 TNS4Q8IZW8 715 aa8.97□□□□□ -0.97
LINC00643-203ENST00000555518 ARID4BQ4LE39 1312 aaPredicted RBP8.97□□□□□ -0.97
LINC00643-203ENST00000555518 MYOM2P54296 1465 aa8.96□□□□□ -0.97
LINC00643-203ENST00000555518 TMEM131LA2VDJ0 1609 aa8.96□□□□□ -0.98
LINC00643-203ENST00000555518 RAC1P63000 192 aa8.96□□□□□ -0.98
LINC00643-203ENST00000555518 C20orf204Q6ZNR8 217 aa8.96□□□□□ -0.98
LINC00643-203ENST00000555518 PLEKHM2Q8IWE5 1019 aa8.96□□□□□ -0.98
LINC00643-203ENST00000555518 COG6Q9Y2V7 657 aa8.96□□□□□ -0.98
LINC00643-203ENST00000555518 C3P01024 1663 aa8.96□□□□□ -0.98
LINC00643-203ENST00000555518 PPLO60437 1756 aa8.96□□□□□ -0.98
LINC00643-203ENST00000555518 TRPM1Q7Z4N2 1603 aa8.95□□□□□ -0.98
LINC00643-203ENST00000555518 FAM229AH3BQW9 127 aa8.95□□□□□ -0.98
LINC00643-203ENST00000555518 IDI1Q13907 227 aa8.95□□□□□ -0.98
LINC00643-203ENST00000555518 RGL3Q3MIN7 710 aa8.95□□□□□ -0.98
LINC00643-203ENST00000555518 DCAF11Q8TEB1 546 aa8.95□□□□□ -0.98
LINC00643-203ENST00000555518 MYO5BQ9ULV0 1848 aa8.95□□□□□ -0.98
LINC00643-203ENST00000555518 NEXMIFQ5QGS0 1516 aa8.95□□□□□ -0.98
LINC00643-203ENST00000555518 TYRO3Q06418 890 aa8.94□□□□□ -0.98
LINC00643-203ENST00000555518 ADGRE1Q14246 886 aa8.94□□□□□ -0.98
LINC00643-203ENST00000555518 GRIK4Q16099 956 aa8.94□□□□□ -0.98
LINC00643-203ENST00000555518 PRSS36Q5K4E3 855 aa8.94□□□□□ -0.98
LINC00643-203ENST00000555518 CCDC102BQ68D86 513 aa8.94□□□□□ -0.98
LINC00643-203ENST00000555518 NBPF11Q86T75 865 aa8.94□□□□□ -0.98
LINC00643-203ENST00000555518 LARGE2Q8N3Y3 721 aa8.94□□□□□ -0.98
LINC00643-203ENST00000555518 TPCN2Q8NHX9 752 aa8.94□□□□□ -0.98
LINC00643-203ENST00000555518 SLC52A1Q9NWF4 448 aa8.94□□□□□ -0.98
LINC00643-203ENST00000555518 RBM19Q9Y4C8 960 aaKnown RBP8.94□□□□□ -0.98
LINC00643-203ENST00000555518 GPRASP1Q5JY77 1395 aa8.94□□□□□ -0.98
LINC00643-203ENST00000555518 SFI1A8K8P3 1242 aa8.93□□□□□ -0.98
LINC00643-203ENST00000555518 TBCELQ5QJ74 424 aa8.93□□□□□ -0.98
LINC00643-203ENST00000555518 TXNRD3Q86VQ6 643 aa8.93□□□□□ -0.98
LINC00643-203ENST00000555518 LENG1Q96BZ8 264 aaPredicted RBP8.93□□□□□ -0.98
LINC00643-203ENST00000555518 PHACTR1Q9C0D0 580 aa8.93□□□□□ -0.98
LINC00643-203ENST00000555518 TNRQ92752 1358 aa8.93□□□□□ -0.98
LINC00643-203ENST00000555518 A2ML1A8K2U0 1454 aa8.93□□□□□ -0.98
LINC00643-203ENST00000555518 LAMC1P11047 1609 aa8.93□□□□□ -0.98
LINC00643-203ENST00000555518 RIMS1Q86UR5 1692 aaKnown RBP8.93□□□□□ -0.98
LINC00643-203ENST00000555518 PALM3A6NDB9 673 aaPredicted RBP8.92□□□□□ -0.98
LINC00643-203ENST00000555518 RAD21O60216 631 aa8.92□□□□□ -0.98
LINC00643-203ENST00000555518 C8orf86Q6ZUL3 223 aa8.92□□□□□ -0.98
LINC00643-203ENST00000555518 STAG2Q8N3U4 1231 aa8.92□□□□□ -0.98
LINC00643-203ENST00000555518 GAS2L2Q8NHY3 880 aa8.92□□□□□ -0.98
LINC00643-203ENST00000555518 SUSD3Q96L08 255 aa8.92□□□□□ -0.98
LINC00643-203ENST00000555518 KIAA1210Q9ULL0 1709 aa8.91□□□□□ -0.98
LINC00643-203ENST00000555518 KDM5AP29375 1690 aaKnown RBP8.91□□□□□ -0.98
LINC00643-203ENST00000555518 PIK3C2GO75747 1445 aa8.91□□□□□ -0.98
LINC00643-203ENST00000555518 ZFYVE9O95405 1425 aa8.91□□□□□ -0.98
LINC00643-203ENST00000555518 RPGRIP1LQ68CZ1 1315 aa8.91□□□□□ -0.98
LINC00643-203ENST00000555518 ADGRF5Q8IZF2 1346 aa8.91□□□□□ -0.98
LINC00643-203ENST00000555518 A0A0A0MRY4 1105 aa8.91□□□□□ -0.98
LINC00643-203ENST00000555518 CEBPAP49715 358 aaPredicted RBP8.91□□□□□ -0.98
LINC00643-203ENST00000555518 MBTPS1Q14703 1052 aa8.91□□□□□ -0.98
LINC00643-203ENST00000555518 PCSK7Q16549 785 aa8.91□□□□□ -0.98
LINC00643-203ENST00000555518 FOXD4L6Q3SYB3 417 aaPredicted RBP8.91□□□□□ -0.98
LINC00643-203ENST00000555518 FOXD4L3Q6VB84 417 aaPredicted RBP8.91□□□□□ -0.98
LINC00643-203ENST00000555518 DEPDC4Q8N2C3 294 aa8.91□□□□□ -0.98
LINC00643-203ENST00000555518 BHMTQ93088 406 aa8.91□□□□□ -0.98
LINC00643-203ENST00000555518 KRTAP9-2Q9BYQ4 174 aa8.91□□□□□ -0.98
LINC00643-203ENST00000555518 UBE2OQ9C0C9 1292 aaKnown RBP8.91□□□□□ -0.98
LINC00643-203ENST00000555518 TSPAN10Q9H1Z9 355 aaPredicted RBP8.91□□□□□ -0.98
LINC00643-203ENST00000555518 HCN4Q9Y3Q4 1203 aa8.91□□□□□ -0.98
LINC00643-203ENST00000555518 ZBTB7BO15156 539 aaPredicted RBP8.9□□□□□ -0.98
LINC00643-203ENST00000555518 ZNF326Q5BKZ1 582 aaKnown RBP8.9□□□□□ -0.98
LINC00643-203ENST00000555518 SH3PXD2AQ5TCZ1 1133 aa8.9□□□□□ -0.98
LINC00643-203ENST00000555518 RAB44Q7Z6P3 723 aaPredicted RBP8.9□□□□□ -0.98
LINC00643-203ENST00000555518 HSH2DQ96JZ2 352 aa8.9□□□□□ -0.98
LINC00643-203ENST00000555518 SLC6A14Q9UN76 642 aa8.9□□□□□ -0.98
LINC00643-203ENST00000555518 UBR1Q8IWV7 1749 aa8.9□□□□□ -0.98
LINC00643-203ENST00000555518 NLRP1Q9C000 1473 aa8.89□□□□□ -0.99
LINC00643-203ENST00000555518 USP17L3A6NCW0 530 aa8.89□□□□□ -0.99
LINC00643-203ENST00000555518 USP17L4A6NCW7 530 aa8.89□□□□□ -0.99
LINC00643-203ENST00000555518 HSPA5P11021 654 aaKnown RBP8.89□□□□□ -0.99
LINC00643-203ENST00000555518 LRP8Q14114 963 aa8.89□□□□□ -0.99
LINC00643-203ENST00000555518 USP17L2Q6R6M4 530 aa8.89□□□□□ -0.99
LINC00643-203ENST00000555518 USP17L1Q7RTZ2 530 aa8.89□□□□□ -0.99
LINC00643-203ENST00000555518 SIX5Q8N196 739 aa8.89□□□□□ -0.99
LINC00643-203ENST00000555518 JPH1Q9HDC5 661 aaPredicted RBP8.89□□□□□ -0.99
LINC00643-203ENST00000555518 ADGRB1O14514 1584 aa8.89□□□□□ -0.99
LINC00643-203ENST00000555518 MYO3AQ8NEV4 1616 aa8.88□□□□□ -0.99
LINC00643-203ENST00000555518 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.88□□□□□ -0.99
LINC00643-203ENST00000555518 PPP1R12BO60237 982 aaPredicted RBP8.88□□□□□ -0.99
LINC00643-203ENST00000555518 SELPP16109 830 aa8.88□□□□□ -0.99
LINC00643-203ENST00000555518 IER5Q5VY09 327 aa8.88□□□□□ -0.99
LINC00643-203ENST00000555518 BTLAQ7Z6A9 289 aa8.88□□□□□ -0.99
LINC00643-203ENST00000555518 PNMA5Q96PV4 448 aa8.88□□□□□ -0.99
LINC00643-203ENST00000555518 ASXL1Q8IXJ9 1541 aa8.88□□□□□ -0.99
LINC00643-203ENST00000555518 IQGAP1P46940 1657 aa8.88□□□□□ -0.99
LINC00643-203ENST00000555518 ROCK2O75116 1388 aaKnown RBP8.87□□□□□ -0.99
LINC00643-203ENST00000555518 USP47Q96K76 1375 aa8.87□□□□□ -0.99
LINC00643-203ENST00000555518 CLDN10P78369 228 aa8.87□□□□□ -0.99
LINC00643-203ENST00000555518 ALDH16A1Q8IZ83 802 aa8.87□□□□□ -0.99
LINC00643-203ENST00000555518 OGFOD1Q8N543 542 aa8.87□□□□□ -0.99
LINC00643-203ENST00000555518 DTWD1Q8N5C7 304 aa8.87□□□□□ -0.99
LINC00643-203ENST00000555518 ARHGAP23Q9P227 1491 aa8.87□□□□□ -0.99
LINC00643-203ENST00000555518 RIMS2Q9UQ26 1411 aa8.87□□□□□ -0.99
LINC00643-203ENST00000555518 NRXN3Q9Y4C0 1643 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms