RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 RIPOR2Q9Y4F9 1068 aa17.19■□□□□ 0.34
SNX6-203ENST00000555416 ZNF646O15015 1829 aaPredicted RBP17.19■□□□□ 0.34
SNX6-203ENST00000555416 UBTFL1P0CB47 393 aaPredicted RBP17.18■□□□□ 0.34
SNX6-203ENST00000555416 FMR1Q06787 632 aaKnown RBP eCLIP17.18■□□□□ 0.34
SNX6-203ENST00000555416 MICALL2Q8IY33 904 aa17.18■□□□□ 0.34
SNX6-203ENST00000555416 ADARB2Q9NS39 739 aaKnown RBP17.18■□□□□ 0.34
SNX6-203ENST00000555416 LRRFIP2Q9Y608 721 aaKnown RBP17.18■□□□□ 0.34
SNX6-203ENST00000555416 PSME4Q14997 1843 aa17.17■□□□□ 0.34
SNX6-203ENST00000555416 IPO8O15397 1037 aaKnown RBP17.17■□□□□ 0.34
SNX6-203ENST00000555416 SAMD7Q7Z3H4 446 aa17.17■□□□□ 0.34
SNX6-203ENST00000555416 DNAJC5GQ8N7S2 189 aa17.17■□□□□ 0.34
SNX6-203ENST00000555416 DPF2Q92785 391 aa17.17■□□□□ 0.34
SNX6-203ENST00000555416 PASKQ96RG2 1323 aa17.17■□□□□ 0.34
SNX6-203ENST00000555416 RLBP1P12271 317 aa17.16■□□□□ 0.34
SNX6-203ENST00000555416 KCNJ4P48050 445 aa17.16■□□□□ 0.34
SNX6-203ENST00000555416 USP50Q70EL3 339 aaPredicted RBP17.16■□□□□ 0.34
SNX6-203ENST00000555416 PODNQ7Z5L7 613 aa17.16■□□□□ 0.34
SNX6-203ENST00000555416 CNTROBQ8N137 903 aa17.16■□□□□ 0.34
SNX6-203ENST00000555416 GMLQ99445 158 aa17.16■□□□□ 0.34
SNX6-203ENST00000555416 COA1Q9GZY4 146 aa17.16■□□□□ 0.34
SNX6-203ENST00000555416 USP17L3A6NCW0 530 aa17.15■□□□□ 0.34
SNX6-203ENST00000555416 USP17L4A6NCW7 530 aa17.15■□□□□ 0.34
SNX6-203ENST00000555416 PTPN12Q05209 780 aaKnown RBP17.15■□□□□ 0.34
SNX6-203ENST00000555416 TBC1D10BQ4KMP7 808 aaPredicted RBP17.15■□□□□ 0.34
SNX6-203ENST00000555416 ZKSCAN2Q63HK3 967 aa17.15■□□□□ 0.34
SNX6-203ENST00000555416 RSBN1LQ6PCB5 846 aaPredicted RBP17.15■□□□□ 0.34
SNX6-203ENST00000555416 C15orf52Q6ZUT6 534 aaKnown RBP17.15■□□□□ 0.34
SNX6-203ENST00000555416 USP17L1Q7RTZ2 530 aa17.15■□□□□ 0.34
SNX6-203ENST00000555416 TMEM57Q8N5G2 664 aa17.15■□□□□ 0.34
SNX6-203ENST00000555416 TRAF5O00463 557 aa17.14■□□□□ 0.33
SNX6-203ENST00000555416 RPS12P25398 132 aaKnown RBP17.14■□□□□ 0.33
SNX6-203ENST00000555416 DACT2Q5SW24 774 aa17.14■□□□□ 0.33
SNX6-203ENST00000555416 VGLL2Q8N8G2 317 aa17.14■□□□□ 0.33
SNX6-203ENST00000555416 CD209Q9NNX6 404 aa17.14■□□□□ 0.33
SNX6-203ENST00000555416 H7C1D1 291 aa17.13■□□□□ 0.33
SNX6-203ENST00000555416 RBM26Q5T8P6 1007 aaKnown RBP17.13■□□□□ 0.33
SNX6-203ENST00000555416 DLK2Q6UY11 383 aa17.13■□□□□ 0.33
SNX6-203ENST00000555416 PA2G4Q9UQ80 394 aaKnown RBP17.13■□□□□ 0.33
SNX6-203ENST00000555416 ASTN2O75129 1339 aaPredicted RBP17.13■□□□□ 0.33
SNX6-203ENST00000555416 ZNF609O15014 1411 aa17.13■□□□□ 0.33
SNX6-203ENST00000555416 GYG1P46976 350 aa17.12■□□□□ 0.33
SNX6-203ENST00000555416 ATG9AQ7Z3C6 839 aa17.12■□□□□ 0.33
SNX6-203ENST00000555416 FBXW7Q969H0 707 aa17.12■□□□□ 0.33
SNX6-203ENST00000555416 PGAP2Q9UHJ9 254 aa17.12■□□□□ 0.33
SNX6-203ENST00000555416 MROH5Q6ZUA9 1318 aa17.12■□□□□ 0.33
SNX6-203ENST00000555416 ZNF280AP59817 542 aaPredicted RBP17.11■□□□□ 0.33
SNX6-203ENST00000555416 GTF2IP78347 998 aa17.11■□□□□ 0.33
SNX6-203ENST00000555416 UBE4AQ14139 1066 aa17.11■□□□□ 0.33
SNX6-203ENST00000555416 METTL24Q5JXM2 366 aa17.11■□□□□ 0.33
SNX6-203ENST00000555416 STRIP1Q5VSL9 837 aa17.11■□□□□ 0.33
SNX6-203ENST00000555416 TTLL5Q6EMB2 1281 aa17.11■□□□□ 0.33
SNX6-203ENST00000555416 AGBL3Q8NEM8 1001 aa17.11■□□□□ 0.33
SNX6-203ENST00000555416 FAM84BQ96KN1 310 aaPredicted RBP17.11■□□□□ 0.33
SNX6-203ENST00000555416 GLIS2Q9BZE0 524 aaPredicted RBP17.11■□□□□ 0.33
SNX6-203ENST00000555416 SIL1Q9H173 461 aa17.11■□□□□ 0.33
SNX6-203ENST00000555416 EYA2O00167 538 aa17.1■□□□□ 0.33
SNX6-203ENST00000555416 GNAI3P08754 354 aa17.1■□□□□ 0.33
SNX6-203ENST00000555416 IL1R1P14778 569 aa17.1■□□□□ 0.33
SNX6-203ENST00000555416 KIF4BQ2VIQ3 1234 aa17.1■□□□□ 0.33
SNX6-203ENST00000555416 CERS5Q8N5B7 392 aa17.1■□□□□ 0.33
SNX6-203ENST00000555416 JAG2Q9Y219 1238 aa17.1■□□□□ 0.33
SNX6-203ENST00000555416 PDE8BO95263 885 aa17.09■□□□□ 0.33
SNX6-203ENST00000555416 USP17L8P0C7I0 530 aa17.09■□□□□ 0.33
SNX6-203ENST00000555416 MAPK8IP2Q13387 824 aaPredicted RBP17.09■□□□□ 0.33
SNX6-203ENST00000555416 ZNF804AQ7Z570 1209 aa17.09■□□□□ 0.33
SNX6-203ENST00000555416 DZIP1LQ8IYY4 767 aaKnown RBP17.09■□□□□ 0.33
SNX6-203ENST00000555416 PANK1Q8TE04 598 aa17.09■□□□□ 0.33
SNX6-203ENST00000555416 CREBZFQ9NS37 354 aa17.09■□□□□ 0.33
SNX6-203ENST00000555416 FGFR2P21802 821 aa17.08■□□□□ 0.32
SNX6-203ENST00000555416 ZC3H15Q8WU90 426 aaKnown RBP17.08■□□□□ 0.32
SNX6-203ENST00000555416 KLRG1Q96E93 195 aa17.08■□□□□ 0.32
SNX6-203ENST00000555416 PNMA6EA0A0J9YXQ4 647 aa17.07■□□□□ 0.32
SNX6-203ENST00000555416 MTX1Q13505 466 aa17.07■□□□□ 0.32
SNX6-203ENST00000555416 CST9Q5W186 159 aa17.07■□□□□ 0.32
SNX6-203ENST00000555416 FBXO33Q7Z6M2 555 aa17.07■□□□□ 0.32
SNX6-203ENST00000555416 KIAA0825Q8IV33 1275 aa17.07■□□□□ 0.32
SNX6-203ENST00000555416 TDRD7Q8NHU6 1098 aaKnown RBP17.07■□□□□ 0.32
SNX6-203ENST00000555416 C1orf115Q9H7X2 142 aa17.07■□□□□ 0.32
SNX6-203ENST00000555416 MYOZ2Q9NPC6 264 aa17.07■□□□□ 0.32
SNX6-203ENST00000555416 IQSEC3Q9UPP2 1182 aaPredicted RBP17.07■□□□□ 0.32
SNX6-203ENST00000555416 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.07■□□□□ 0.32
SNX6-203ENST00000555416 POLR2AP24928 1970 aaKnown RBP17.07■□□□□ 0.32
SNX6-203ENST00000555416 TMEM88BA6NKF7 163 aa17.06■□□□□ 0.32
SNX6-203ENST00000555416 ZBTB7BO15156 539 aaPredicted RBP17.06■□□□□ 0.32
SNX6-203ENST00000555416 SRGAP3O43295 1099 aa17.06■□□□□ 0.32
SNX6-203ENST00000555416 CIAO1O76071 339 aa17.06■□□□□ 0.32
SNX6-203ENST00000555416 GNAI2P04899 355 aa17.06■□□□□ 0.32
SNX6-203ENST00000555416 HIBADHP31937 336 aaKnown RBP17.06■□□□□ 0.32
SNX6-203ENST00000555416 USP48Q86UV5 1035 aa17.06■□□□□ 0.32
SNX6-203ENST00000555416 ITPRIPQ8IWB1 547 aa17.06■□□□□ 0.32
SNX6-203ENST00000555416 FTSJ3Q8IY81 847 aaKnown RBP17.06■□□□□ 0.32
SNX6-203ENST00000555416 COPRSQ9NQ92 184 aa17.06■□□□□ 0.32
SNX6-203ENST00000555416 MKRN1Q9UHC7 482 aaKnown RBP17.06■□□□□ 0.32
SNX6-203ENST00000555416 RCAN3Q9UKA8 241 aa17.06■□□□□ 0.32
SNX6-203ENST00000555416 SCAF8Q9UPN6 1271 aaKnown RBP17.06■□□□□ 0.32
SNX6-203ENST00000555416 ADM5C9JUS6 153 aa17.05■□□□□ 0.32
SNX6-203ENST00000555416 BCAMP50895 628 aa17.05■□□□□ 0.32
SNX6-203ENST00000555416 SCARF1Q14162 830 aa17.05■□□□□ 0.32
SNX6-203ENST00000555416 PUM3Q15397 648 aaKnown RBP17.05■□□□□ 0.32
SNX6-203ENST00000555416 NBPF9Q3BBW0 867 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms