RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 FPGT-TNNI3KV9GXZ4 949 aa15.65■□□□□ 0.1
SYNE2-219ENST00000555323 SPEF2Q9C093 1822 aa15.64■□□□□ 0.09
SYNE2-219ENST00000555323 A0A1B0GUL7 405 aa15.64■□□□□ 0.09
SYNE2-219ENST00000555323 PPIP5K2O43314 1243 aa15.64■□□□□ 0.09
SYNE2-219ENST00000555323 FBXO33Q7Z6M2 555 aa15.64■□□□□ 0.09
SYNE2-219ENST00000555323 EAF2Q96CJ1 260 aaPredicted RBP15.64■□□□□ 0.09
SYNE2-219ENST00000555323 FAM84BQ96KN1 310 aaPredicted RBP15.64■□□□□ 0.09
SYNE2-219ENST00000555323 LRRCC1Q9C099 1032 aa15.64■□□□□ 0.09
SYNE2-219ENST00000555323 RIMBP2O15034 1052 aa15.63■□□□□ 0.09
SYNE2-219ENST00000555323 SLC5A1P13866 664 aa15.63■□□□□ 0.09
SYNE2-219ENST00000555323 KLRK1P26718 216 aa15.63■□□□□ 0.09
SYNE2-219ENST00000555323 AOC3Q16853 763 aa15.63■□□□□ 0.09
SYNE2-219ENST00000555323 PODNQ7Z5L7 613 aa15.63■□□□□ 0.09
SYNE2-219ENST00000555323 CLASRPQ8N2M8 674 aaKnown RBP15.63■□□□□ 0.09
SYNE2-219ENST00000555323 LARGE2Q8N3Y3 721 aa15.63■□□□□ 0.09
SYNE2-219ENST00000555323 GPR101Q96P66 508 aaPredicted RBP15.63■□□□□ 0.09
SYNE2-219ENST00000555323 COA1Q9GZY4 146 aa15.63■□□□□ 0.09
SYNE2-219ENST00000555323 FZD9O00144 591 aa15.62■□□□□ 0.09
SYNE2-219ENST00000555323 C9orf131Q5VYM1 1079 aa15.62■□□□□ 0.09
SYNE2-219ENST00000555323 JDP2Q8WYK2 163 aa15.62■□□□□ 0.09
SYNE2-219ENST00000555323 CD209Q9NNX6 404 aa15.62■□□□□ 0.09
SYNE2-219ENST00000555323 IL1R1P14778 569 aa15.61■□□□□ 0.09
SYNE2-219ENST00000555323 HIBADHP31937 336 aaKnown RBP15.61■□□□□ 0.09
SYNE2-219ENST00000555323 CAVIN4Q5BKX8 364 aa15.61■□□□□ 0.09
SYNE2-219ENST00000555323 XAGE2Q96GT9 111 aa15.61■□□□□ 0.09
SYNE2-219ENST00000555323 IL1RAPL2Q9NP60 686 aa15.61■□□□□ 0.09
SYNE2-219ENST00000555323 ZNRF3Q9ULT6 936 aa15.61■□□□□ 0.09
SYNE2-219ENST00000555323 A0A1B0GUL6 1792 aa15.61■□□□□ 0.09
SYNE2-219ENST00000555323 APBB1O00213 710 aa15.6■□□□□ 0.09
SYNE2-219ENST00000555323 GYG1P46976 350 aa15.6■□□□□ 0.09
SYNE2-219ENST00000555323 ZNF804AQ7Z570 1209 aa15.6■□□□□ 0.09
SYNE2-219ENST00000555323 NIM1KQ8IY84 436 aa15.6■□□□□ 0.09
SYNE2-219ENST00000555323 TDRD7Q8NHU6 1098 aaKnown RBP15.6■□□□□ 0.09
SYNE2-219ENST00000555323 NEUROD6Q96NK8 337 aa15.6■□□□□ 0.09
SYNE2-219ENST00000555323 PPP4R2Q9NY27 417 aa15.6■□□□□ 0.09
SYNE2-219ENST00000555323 RNF181Q9P0P0 153 aa15.6■□□□□ 0.09
SYNE2-219ENST00000555323 KDM2BQ8NHM5 1336 aa15.6■□□□□ 0.09
SYNE2-219ENST00000555323 ZC3H4Q9UPT8 1303 aaKnown RBP15.6■□□□□ 0.09
SYNE2-219ENST00000555323 ZNF609O15014 1411 aa15.6■□□□□ 0.09
SYNE2-219ENST00000555323 SBF1O95248 1867 aa15.59■□□□□ 0.09
SYNE2-219ENST00000555323 YDJCA8MPS7 323 aa15.59■□□□□ 0.09
SYNE2-219ENST00000555323 ADORA1P30542 326 aa15.59■□□□□ 0.09
SYNE2-219ENST00000555323 BCAMP50895 628 aa15.59■□□□□ 0.09
SYNE2-219ENST00000555323 NUCB1Q02818 461 aa15.59■□□□□ 0.09
SYNE2-219ENST00000555323 DOK7Q18PE1 504 aa15.59■□□□□ 0.09
SYNE2-219ENST00000555323 ANKRD45Q5TZF3 282 aa15.59■□□□□ 0.09
SYNE2-219ENST00000555323 CCDC102BQ68D86 513 aa15.59■□□□□ 0.09
SYNE2-219ENST00000555323 AACSQ86V21 672 aa15.59■□□□□ 0.09
SYNE2-219ENST00000555323 ZNF512BQ96KM6 892 aaPredicted RBP15.59■□□□□ 0.09
SYNE2-219ENST00000555323 CCDC8Q9H0W5 538 aaPredicted RBP15.59■□□□□ 0.09
SYNE2-219ENST00000555323 DBNLQ9UJU6 430 aaKnown RBP15.59■□□□□ 0.09
SYNE2-219ENST00000555323 COL4A5P29400 1685 aa15.58■□□□□ 0.08
SYNE2-219ENST00000555323 SMARCA5O60264 1052 aaPredicted RBP15.58■□□□□ 0.08
SYNE2-219ENST00000555323 ECE2O60344 883 aa15.58■□□□□ 0.08
SYNE2-219ENST00000555323 DBNDD2Q9BQY9 259 aa15.58■□□□□ 0.08
SYNE2-219ENST00000555323 DBNDD1Q9H9R9 158 aa15.58■□□□□ 0.08
SYNE2-219ENST00000555323 G3V3G9 751 aa15.57■□□□□ 0.08
SYNE2-219ENST00000555323 SEMA3EO15041 775 aa15.57■□□□□ 0.08
SYNE2-219ENST00000555323 IFIT2P09913 472 aaKnown RBP15.57■□□□□ 0.08
SYNE2-219ENST00000555323 PHKA1P46020 1223 aa15.57■□□□□ 0.08
SYNE2-219ENST00000555323 CXCL9Q07325 125 aa15.57■□□□□ 0.08
SYNE2-219ENST00000555323 DCAF8Q5TAQ9 597 aa15.57■□□□□ 0.08
SYNE2-219ENST00000555323 CENPQQ7L2Z9 268 aaPredicted RBP15.57■□□□□ 0.08
SYNE2-219ENST00000555323 VPS37DQ86XT2 251 aa15.57■□□□□ 0.08
SYNE2-219ENST00000555323 CCDC136Q96JN2 1154 aa15.57■□□□□ 0.08
SYNE2-219ENST00000555323 ARID4AP29374 1257 aaPredicted RBP15.56■□□□□ 0.08
SYNE2-219ENST00000555323 CCDC158Q5M9N0 1113 aa15.56■□□□□ 0.08
SYNE2-219ENST00000555323 STRIP1Q5VSL9 837 aa15.56■□□□□ 0.08
SYNE2-219ENST00000555323 CHD1LQ86WJ1 897 aa15.56■□□□□ 0.08
SYNE2-219ENST00000555323 KCNQ5Q9NR82 932 aa15.56■□□□□ 0.08
SYNE2-219ENST00000555323 GNL3LQ9NVN8 582 aaKnown RBP15.56■□□□□ 0.08
SYNE2-219ENST00000555323 TLR7Q9NYK1 1049 aaKnown RBP15.56■□□□□ 0.08
SYNE2-219ENST00000555323 FAM205AQ6ZU69 1335 aa15.56■□□□□ 0.08
SYNE2-219ENST00000555323 DICER1Q9UPY3 1922 aaKnown RBP15.55■□□□□ 0.08
SYNE2-219ENST00000555323 VIL1P09327 827 aaKnown RBP15.55■□□□□ 0.08
SYNE2-219ENST00000555323 UQCRFS1P1P0C7P4 283 aa15.55■□□□□ 0.08
SYNE2-219ENST00000555323 EIF6P56537 245 aaKnown RBP15.55■□□□□ 0.08
SYNE2-219ENST00000555323 GORABQ5T7V8 394 aa15.55■□□□□ 0.08
SYNE2-219ENST00000555323 B4GALNT3Q6L9W6 998 aa15.55■□□□□ 0.08
SYNE2-219ENST00000555323 C16orf71Q8IYS4 520 aaPredicted RBP15.55■□□□□ 0.08
SYNE2-219ENST00000555323 ZBTB47Q9UFB7 747 aaPredicted RBP15.55■□□□□ 0.08
SYNE2-219ENST00000555323 PDS5AQ29RF7 1337 aaKnown RBP15.54■□□□□ 0.08
SYNE2-219ENST00000555323 SALL3Q9BXA9 1300 aa15.54■□□□□ 0.08
SYNE2-219ENST00000555323 USP17L3A6NCW0 530 aa15.54■□□□□ 0.08
SYNE2-219ENST00000555323 USP17L4A6NCW7 530 aa15.54■□□□□ 0.08
SYNE2-219ENST00000555323 FKBP1AP62942 108 aaKnown RBP15.54■□□□□ 0.08
SYNE2-219ENST00000555323 TNIP1Q15025 636 aa15.54■□□□□ 0.08
SYNE2-219ENST00000555323 TTLL5Q6EMB2 1281 aa15.54■□□□□ 0.08
SYNE2-219ENST00000555323 CIAPIN1Q6FI81 312 aa15.54■□□□□ 0.08
SYNE2-219ENST00000555323 USP17L1Q7RTZ2 530 aa15.54■□□□□ 0.08
SYNE2-219ENST00000555323 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.54■□□□□ 0.08
SYNE2-219ENST00000555323 DENND2AQ9ULE3 1009 aa15.54■□□□□ 0.08
SYNE2-219ENST00000555323 CCDC88AQ3V6T2 1871 aa15.54■□□□□ 0.08
SYNE2-219ENST00000555323 GTF2IP78347 998 aa15.53■□□□□ 0.08
SYNE2-219ENST00000555323 DACT2Q5SW24 774 aa15.53■□□□□ 0.08
SYNE2-219ENST00000555323 DPY19L2Q6NUT2 758 aa15.53■□□□□ 0.08
SYNE2-219ENST00000555323 GPC2Q8N158 579 aa15.53■□□□□ 0.08
SYNE2-219ENST00000555323 LNPKQ9C0E8 428 aa15.53■□□□□ 0.08
SYNE2-219ENST00000555323 STAP2Q9UGK3 403 aa15.53■□□□□ 0.08
SYNE2-219ENST00000555323 ARAP2Q8WZ64 1704 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms