RNA–Protein interactions for RNA: ENST00000555322.5

RPGRIP1-207, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-207ENST00000555322 IGSF3O75054 1194 aa10.97□□□□□ -0.65
RPGRIP1-207ENST00000555322 ADORA1P30542 326 aa10.97□□□□□ -0.65
RPGRIP1-207ENST00000555322 RUFY3Q7L099 469 aa10.97□□□□□ -0.65
RPGRIP1-207ENST00000555322 ZNF589Q86UQ0 364 aaPredicted RBP10.97□□□□□ -0.65
RPGRIP1-207ENST00000555322 RASEFQ8IZ41 740 aa10.97□□□□□ -0.65
RPGRIP1-207ENST00000555322 LIMCH1Q9UPQ0 1083 aa10.97□□□□□ -0.65
RPGRIP1-207ENST00000555322 FRAT2O75474 233 aaPredicted RBP10.97□□□□□ -0.65
RPGRIP1-207ENST00000555322 CYP2E1P05181 493 aaPredicted RBP10.97□□□□□ -0.65
RPGRIP1-207ENST00000555322 HMGB1P09429 215 aaKnown RBP10.97□□□□□ -0.65
RPGRIP1-207ENST00000555322 TMEM132AQ24JP5 1023 aa10.97□□□□□ -0.65
RPGRIP1-207ENST00000555322 TMED8Q6PL24 325 aaPredicted RBP10.97□□□□□ -0.65
RPGRIP1-207ENST00000555322 APPBP2Q92624 585 aa10.97□□□□□ -0.65
RPGRIP1-207ENST00000555322 CCDC85AQ96PX6 553 aaPredicted RBP10.97□□□□□ -0.65
RPGRIP1-207ENST00000555322 BSDC1Q9NW68 430 aaPredicted RBP10.97□□□□□ -0.65
RPGRIP1-207ENST00000555322 CASTP20810 708 aaKnown RBP10.96□□□□□ -0.65
RPGRIP1-207ENST00000555322 MCM4P33991 863 aa10.96□□□□□ -0.65
RPGRIP1-207ENST00000555322 RBM6P78332 1123 aaKnown RBP10.96□□□□□ -0.65
RPGRIP1-207ENST00000555322 ERFEQ4G0M1 354 aa10.96□□□□□ -0.65
RPGRIP1-207ENST00000555322 TRAPPC3LQ5T215 181 aa10.96□□□□□ -0.65
RPGRIP1-207ENST00000555322 TBC1D9BQ66K14 1250 aa10.96□□□□□ -0.65
RPGRIP1-207ENST00000555322 TPTE2Q6XPS3 522 aa10.96□□□□□ -0.65
RPGRIP1-207ENST00000555322 PTF1AQ7RTS3 328 aa10.96□□□□□ -0.65
RPGRIP1-207ENST00000555322 ANKRD18AQ8IVF6 992 aa10.96□□□□□ -0.65
RPGRIP1-207ENST00000555322 EDC3Q96F86 508 aaKnown RBP10.96□□□□□ -0.65
RPGRIP1-207ENST00000555322 JAKMIP1Q96N16 626 aaKnown RBP10.96□□□□□ -0.65
RPGRIP1-207ENST00000555322 AKAP11Q9UKA4 1901 aa10.96□□□□□ -0.65
RPGRIP1-207ENST00000555322 UBE4AQ14139 1066 aa10.96□□□□□ -0.66
RPGRIP1-207ENST00000555322 SPRYD3Q8NCJ5 442 aa10.96□□□□□ -0.66
RPGRIP1-207ENST00000555322 PDRG1Q9NUG6 133 aa10.96□□□□□ -0.66
RPGRIP1-207ENST00000555322 CTNNA3Q9UI47 895 aa10.96□□□□□ -0.66
RPGRIP1-207ENST00000555322 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.96□□□□□ -0.66
RPGRIP1-207ENST00000555322 MAST3O60307 1309 aa10.96□□□□□ -0.66
RPGRIP1-207ENST00000555322 PDS5AQ29RF7 1337 aaKnown RBP10.96□□□□□ -0.66
RPGRIP1-207ENST00000555322 ZMYM6O95789 1325 aa10.95□□□□□ -0.66
RPGRIP1-207ENST00000555322 RFC4P35249 363 aa10.95□□□□□ -0.66
RPGRIP1-207ENST00000555322 UBE3CQ15386 1083 aa10.95□□□□□ -0.66
RPGRIP1-207ENST00000555322 CCDC102BQ68D86 513 aa10.95□□□□□ -0.66
RPGRIP1-207ENST00000555322 BLOC1S2Q6QNY1 142 aa10.95□□□□□ -0.66
RPGRIP1-207ENST00000555322 NBPF5PQ86XG9 351 aaPredicted RBP10.95□□□□□ -0.66
RPGRIP1-207ENST00000555322 ARHGEF1Q92888 912 aaKnown RBP10.95□□□□□ -0.66
RPGRIP1-207ENST00000555322 UPF3BQ9BZI7 483 aaKnown RBP10.95□□□□□ -0.66
RPGRIP1-207ENST00000555322 ZNF804BA4D1E1 1349 aa10.95□□□□□ -0.66
RPGRIP1-207ENST00000555322 RPS6KB1P23443 525 aa10.95□□□□□ -0.66
RPGRIP1-207ENST00000555322 MCAMP43121 646 aa10.95□□□□□ -0.66
RPGRIP1-207ENST00000555322 FKBP4Q02790 459 aaKnown RBP eCLIP10.95□□□□□ -0.66
RPGRIP1-207ENST00000555322 TNPO1Q92973 898 aaKnown RBP10.95□□□□□ -0.66
RPGRIP1-207ENST00000555322 NLRP3Q96P20 1036 aa10.95□□□□□ -0.66
RPGRIP1-207ENST00000555322 DUOX1Q9NRD9 1551 aa10.94□□□□□ -0.66
RPGRIP1-207ENST00000555322 GOLGA6L22H0YM25 854 aa10.94□□□□□ -0.66
RPGRIP1-207ENST00000555322 GTF2E1P29083 439 aaPredicted RBP10.94□□□□□ -0.66
RPGRIP1-207ENST00000555322 ZAP70P43403 619 aa10.94□□□□□ -0.66
RPGRIP1-207ENST00000555322 AK2P54819 239 aa10.94□□□□□ -0.66
RPGRIP1-207ENST00000555322 PLCB2Q00722 1185 aa10.94□□□□□ -0.66
RPGRIP1-207ENST00000555322 SAMD1Q6SPF0 538 aaPredicted RBP10.94□□□□□ -0.66
RPGRIP1-207ENST00000555322 ANKRD2Q9GZV1 360 aa10.94□□□□□ -0.66
RPGRIP1-207ENST00000555322 SEMA3EO15041 775 aa10.94□□□□□ -0.66
RPGRIP1-207ENST00000555322 ADD2P35612 726 aa10.94□□□□□ -0.66
RPGRIP1-207ENST00000555322 CHRNDQ07001 517 aa10.94□□□□□ -0.66
RPGRIP1-207ENST00000555322 CHMP4CQ96CF2 233 aa10.94□□□□□ -0.66
RPGRIP1-207ENST00000555322 SEC31BQ9NQW1 1179 aa10.94□□□□□ -0.66
RPGRIP1-207ENST00000555322 SKOR2Q2VWA4 1001 aaPredicted RBP10.93□□□□□ -0.66
RPGRIP1-207ENST00000555322 FBXL16Q8N461 479 aa10.93□□□□□ -0.66
RPGRIP1-207ENST00000555322 GNL3LQ9NVN8 582 aaKnown RBP10.93□□□□□ -0.66
RPGRIP1-207ENST00000555322 TNRC6CQ9HCJ0 1690 aaKnown RBP10.93□□□□□ -0.66
RPGRIP1-207ENST00000555322 LAMA4Q16363 1823 aa10.93□□□□□ -0.66
RPGRIP1-207ENST00000555322 HSPD1P10809 573 aaKnown RBP10.92□□□□□ -0.66
RPGRIP1-207ENST00000555322 BRD2P25440 801 aaKnown RBP10.92□□□□□ -0.66
RPGRIP1-207ENST00000555322 SCARF1Q14162 830 aa10.92□□□□□ -0.66
RPGRIP1-207ENST00000555322 ADCK5Q3MIX3 580 aa10.92□□□□□ -0.66
RPGRIP1-207ENST00000555322 SPATA5Q8NB90 893 aa10.92□□□□□ -0.66
RPGRIP1-207ENST00000555322 SRP68Q9UHB9 627 aaKnown RBP10.92□□□□□ -0.66
RPGRIP1-207ENST00000555322 WDR19Q8NEZ3 1342 aa10.92□□□□□ -0.66
RPGRIP1-207ENST00000555322 FAM177BA6PVY3 158 aa10.92□□□□□ -0.66
RPGRIP1-207ENST00000555322 PLSCR1O15162 318 aa10.92□□□□□ -0.66
RPGRIP1-207ENST00000555322 PHKA1P46020 1223 aa10.92□□□□□ -0.66
RPGRIP1-207ENST00000555322 NEK1Q96PY6 1258 aa10.92□□□□□ -0.66
RPGRIP1-207ENST00000555322 NDUFB9Q9Y6M9 179 aa10.92□□□□□ -0.66
RPGRIP1-207ENST00000555322 MAST2Q6P0Q8 1798 aa10.92□□□□□ -0.66
RPGRIP1-207ENST00000555322 MAP3K12Q12852 859 aa10.91□□□□□ -0.66
RPGRIP1-207ENST00000555322 OSBP2Q969R2 916 aa10.91□□□□□ -0.66
RPGRIP1-207ENST00000555322 LRRC4BQ9NT99 713 aa10.91□□□□□ -0.66
RPGRIP1-207ENST00000555322 WDR33Q9C0J8 1336 aaKnown RBP10.91□□□□□ -0.66
RPGRIP1-207ENST00000555322 M0R2C6 588 aa10.91□□□□□ -0.66
RPGRIP1-207ENST00000555322 BRD1O95696 1058 aa10.91□□□□□ -0.66
RPGRIP1-207ENST00000555322 CYP21A2P08686 494 aa10.91□□□□□ -0.66
RPGRIP1-207ENST00000555322 FAM182BQ5T319 152 aa10.91□□□□□ -0.66
RPGRIP1-207ENST00000555322 ZGPATQ8N5A5 531 aaKnown RBP10.91□□□□□ -0.66
RPGRIP1-207ENST00000555322 SEC62Q99442 399 aaKnown RBP10.91□□□□□ -0.66
RPGRIP1-207ENST00000555322 TIAM2Q8IVF5 1701 aa10.91□□□□□ -0.66
RPGRIP1-207ENST00000555322 GNAT2P19087 354 aa10.9□□□□□ -0.66
RPGRIP1-207ENST00000555322 KCNQ4P56696 695 aa10.9□□□□□ -0.66
RPGRIP1-207ENST00000555322 RPS8P62241 208 aaKnown RBP10.9□□□□□ -0.66
RPGRIP1-207ENST00000555322 RASGRF1Q13972 1273 aa10.9□□□□□ -0.66
RPGRIP1-207ENST00000555322 ALX1Q15699 326 aa10.9□□□□□ -0.66
RPGRIP1-207ENST00000555322 IMMTQ16891 758 aaKnown RBP10.9□□□□□ -0.66
RPGRIP1-207ENST00000555322 WASHC4Q2M389 1173 aa10.9□□□□□ -0.66
RPGRIP1-207ENST00000555322 CCDC129Q6ZRS4 1044 aa10.9□□□□□ -0.66
RPGRIP1-207ENST00000555322 CNBD1Q8NA66 436 aa10.9□□□□□ -0.66
RPGRIP1-207ENST00000555322 FLAD1Q8NFF5 587 aa10.9□□□□□ -0.66
RPGRIP1-207ENST00000555322 FOXD4L1Q9NU39 408 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms