RNA–Protein interactions for RNA: ENST00000555243.1

PTPN21-207, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 5

Gene PTPN21, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-207ENST00000555243 ZNF280AP59817 542 aaPredicted RBP17.26■□□□□ 0.35
PTPN21-207ENST00000555243 COA1Q9GZY4 146 aa17.26■□□□□ 0.35
PTPN21-207ENST00000555243 ANKRD18BA2A2Z9 1011 aa17.25■□□□□ 0.35
PTPN21-207ENST00000555243 SCARF1Q14162 830 aa17.25■□□□□ 0.35
PTPN21-207ENST00000555243 FAM161AQ3B820 660 aa17.25■□□□□ 0.35
PTPN21-207ENST00000555243 RGMBQ6NW40 437 aa17.25■□□□□ 0.35
PTPN21-207ENST00000555243 MYOZ2Q9NPC6 264 aa17.25■□□□□ 0.35
PTPN21-207ENST00000555243 CHMP3Q9Y3E7 222 aa17.25■□□□□ 0.35
PTPN21-207ENST00000555243 MYO3BQ8WXR4 1341 aa17.24■□□□□ 0.35
PTPN21-207ENST00000555243 ZNF609O15014 1411 aa17.24■□□□□ 0.35
PTPN21-207ENST00000555243 ANGEL2Q5VTE6 544 aaKnown RBP17.24■□□□□ 0.35
PTPN21-207ENST00000555243 CCDC102AQ96A19 550 aa17.24■□□□□ 0.35
PTPN21-207ENST00000555243 ZNF804BA4D1E1 1349 aa17.23■□□□□ 0.35
PTPN21-207ENST00000555243 CSF1RP07333 972 aa17.23■□□□□ 0.35
PTPN21-207ENST00000555243 ZNF157P51786 506 aaPredicted RBP17.23■□□□□ 0.35
PTPN21-207ENST00000555243 IFIT5Q13325 482 aaKnown RBP17.23■□□□□ 0.35
PTPN21-207ENST00000555243 TAF7LQ5H9L4 462 aa17.23■□□□□ 0.35
PTPN21-207ENST00000555243 STRIP1Q5VSL9 837 aa17.23■□□□□ 0.35
PTPN21-207ENST00000555243 DLK2Q6UY11 383 aa17.23■□□□□ 0.35
PTPN21-207ENST00000555243 CDCA5Q96FF9 252 aa17.23■□□□□ 0.35
PTPN21-207ENST00000555243 THSD7BQ9C0I4 1608 aa17.22■□□□□ 0.35
PTPN21-207ENST00000555243 MMP14P50281 582 aa17.22■□□□□ 0.35
PTPN21-207ENST00000555243 GMLQ99445 158 aa17.22■□□□□ 0.35
PTPN21-207ENST00000555243 TSKSQ9UJT2 592 aa17.22■□□□□ 0.35
PTPN21-207ENST00000555243 HDAC9Q9UKV0 1011 aa17.22■□□□□ 0.35
PTPN21-207ENST00000555243 PITPNM2Q9BZ72 1349 aa17.21■□□□□ 0.35
PTPN21-207ENST00000555243 MYH3P11055 1940 aa17.21■□□□□ 0.35
PTPN21-207ENST00000555243 F6X3S4 739 aa17.21■□□□□ 0.35
PTPN21-207ENST00000555243 CASP7P55210 303 aa17.21■□□□□ 0.35
PTPN21-207ENST00000555243 C9orf78Q9NZ63 289 aaPredicted RBP17.21■□□□□ 0.35
PTPN21-207ENST00000555243 ASTN2O75129 1339 aaPredicted RBP17.21■□□□□ 0.34
PTPN21-207ENST00000555243 SCN9AQ15858 1988 aa17.2■□□□□ 0.34
PTPN21-207ENST00000555243 NF2P35240 595 aa17.2■□□□□ 0.34
PTPN21-207ENST00000555243 FKBP1BP68106 108 aa17.2■□□□□ 0.34
PTPN21-207ENST00000555243 CHRNDQ07001 517 aa17.2■□□□□ 0.34
PTPN21-207ENST00000555243 CCDC57Q2TAC2 916 aa17.2■□□□□ 0.34
PTPN21-207ENST00000555243 DACT2Q5SW24 774 aa17.2■□□□□ 0.34
PTPN21-207ENST00000555243 BEND3Q5T5X7 828 aa17.2■□□□□ 0.34
PTPN21-207ENST00000555243 TTLL5Q6EMB2 1281 aa17.2■□□□□ 0.34
PTPN21-207ENST00000555243 WTIPA6NIX2 430 aaPredicted RBP17.19■□□□□ 0.34
PTPN21-207ENST00000555243 GRM8O00222 908 aa17.19■□□□□ 0.34
PTPN21-207ENST00000555243 SLC4A10Q6U841 1118 aa17.19■□□□□ 0.34
PTPN21-207ENST00000555243 ABHD8Q96I13 439 aa17.19■□□□□ 0.34
PTPN21-207ENST00000555243 CACNA1FO60840 1977 aa17.19■□□□□ 0.34
PTPN21-207ENST00000555243 ALDH1L1O75891 902 aa17.18■□□□□ 0.34
PTPN21-207ENST00000555243 GTF2IP78347 998 aa17.18■□□□□ 0.34
PTPN21-207ENST00000555243 TTLL12Q14166 644 aaPredicted RBP17.18■□□□□ 0.34
PTPN21-207ENST00000555243 LMBR1LQ6UX01 489 aa17.18■□□□□ 0.34
PTPN21-207ENST00000555243 SRCIN1Q9C0H9 1055 aa17.18■□□□□ 0.34
PTPN21-207ENST00000555243 SPINK5Q9NQ38 1064 aaPredicted RBP17.18■□□□□ 0.34
PTPN21-207ENST00000555243 FOXO4P98177 505 aa17.17■□□□□ 0.34
PTPN21-207ENST00000555243 KIF23Q02241 960 aaPredicted RBP17.17■□□□□ 0.34
PTPN21-207ENST00000555243 ZNF804AQ7Z570 1209 aa17.17■□□□□ 0.34
PTPN21-207ENST00000555243 TXNRD3Q86VQ6 643 aa17.17■□□□□ 0.34
PTPN21-207ENST00000555243 MXD3Q9BW11 206 aa17.17■□□□□ 0.34
PTPN21-207ENST00000555243 CNNM1Q9NRU3 951 aa17.17■□□□□ 0.34
PTPN21-207ENST00000555243 SLC10A3P09131 477 aa17.16■□□□□ 0.34
PTPN21-207ENST00000555243 NBPF9Q3BBW0 867 aa17.16■□□□□ 0.34
PTPN21-207ENST00000555243 LDHAL6AQ6ZMR3 332 aa17.16■□□□□ 0.34
PTPN21-207ENST00000555243 KIAA0825Q8IV33 1275 aa17.16■□□□□ 0.34
PTPN21-207ENST00000555243 REM2Q8IYK8 340 aaPredicted RBP17.16■□□□□ 0.34
PTPN21-207ENST00000555243 HELBQ8NG08 1087 aaPredicted RBP17.16■□□□□ 0.34
PTPN21-207ENST00000555243 SPEF2Q9C093 1822 aa17.16■□□□□ 0.34
PTPN21-207ENST00000555243 FAM155AB1AL88 458 aaPredicted RBP17.15■□□□□ 0.34
PTPN21-207ENST00000555243 WNT10BO00744 389 aa17.15■□□□□ 0.34
PTPN21-207ENST00000555243 PLIN1O60240 522 aa17.15■□□□□ 0.34
PTPN21-207ENST00000555243 TAF5LO75529 589 aa17.15■□□□□ 0.34
PTPN21-207ENST00000555243 KLRK1P26718 216 aa17.15■□□□□ 0.34
PTPN21-207ENST00000555243 APOBEC3FQ8IUX4 373 aaKnown RBP17.15■□□□□ 0.34
PTPN21-207ENST00000555243 ZIC5Q96T25 663 aa17.15■□□□□ 0.34
PTPN21-207ENST00000555243 CD209Q9NNX6 404 aa17.15■□□□□ 0.34
PTPN21-207ENST00000555243 SAGE1Q9NXZ1 904 aa17.15■□□□□ 0.34
PTPN21-207ENST00000555243 POLR2AP24928 1970 aaKnown RBP17.15■□□□□ 0.34
PTPN21-207ENST00000555243 PSME4Q14997 1843 aa17.14■□□□□ 0.34
PTPN21-207ENST00000555243 C15orf52Q6ZUT6 534 aaKnown RBP17.14■□□□□ 0.33
PTPN21-207ENST00000555243 CCDC85CA6NKD9 419 aa17.13■□□□□ 0.33
PTPN21-207ENST00000555243 SASH1O94885 1247 aa17.13■□□□□ 0.33
PTPN21-207ENST00000555243 DLGAP5Q15398 846 aa17.13■□□□□ 0.33
PTPN21-207ENST00000555243 MYO1BO43795 1136 aa17.12■□□□□ 0.33
PTPN21-207ENST00000555243 DGKZQ13574 1117 aa17.12■□□□□ 0.33
PTPN21-207ENST00000555243 ARMC9Q7Z3E5 817 aa17.12■□□□□ 0.33
PTPN21-207ENST00000555243 RASAL3Q86YV0 1011 aa17.12■□□□□ 0.33
PTPN21-207ENST00000555243 SCAF8Q9UPN6 1271 aaKnown RBP17.12■□□□□ 0.33
PTPN21-207ENST00000555243 PAPPA2Q9BXP8 1791 aa17.11■□□□□ 0.33
PTPN21-207ENST00000555243 E9PSI1 815 aa17.11■□□□□ 0.33
PTPN21-207ENST00000555243 UBE2Q2LH0YL09 131 aa17.11■□□□□ 0.33
PTPN21-207ENST00000555243 SNAP23O00161 211 aa17.11■□□□□ 0.33
PTPN21-207ENST00000555243 TRPA1O75762 1119 aa17.11■□□□□ 0.33
PTPN21-207ENST00000555243 EPHA10Q5JZY3 1008 aa17.11■□□□□ 0.33
PTPN21-207ENST00000555243 PRAMEF18Q5VWM3 479 aa17.11■□□□□ 0.33
PTPN21-207ENST00000555243 ZNF594Q96JF6 807 aaPredicted RBP17.11■□□□□ 0.33
PTPN21-207ENST00000555243 MCOLN1Q9GZU1 580 aa17.11■□□□□ 0.33
PTPN21-207ENST00000555243 RNF186Q9NXI6 227 aa17.11■□□□□ 0.33
PTPN21-207ENST00000555243 CSRNP1Q96S65 589 aa17.1■□□□□ 0.33
PTPN21-207ENST00000555243 F8W031 263 aaPredicted RBP17.09■□□□□ 0.33
PTPN21-207ENST00000555243 IL1R1P14778 569 aa17.09■□□□□ 0.33
PTPN21-207ENST00000555243 RBM5P52756 815 aaKnown RBP eCLIP17.09■□□□□ 0.33
PTPN21-207ENST00000555243 FKBP1AP62942 108 aaKnown RBP17.09■□□□□ 0.33
PTPN21-207ENST00000555243 UBE4AQ14139 1066 aa17.09■□□□□ 0.33
PTPN21-207ENST00000555243 MOB2Q70IA6 237 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms