RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 RASAL3Q86YV0 1011 aa19.84■□□□□ 0.77
NEDD1-207ENST00000555114 TSPYL6Q8N831 410 aa19.84■□□□□ 0.77
NEDD1-207ENST00000555114 CSRNP1Q96S65 589 aa19.84■□□□□ 0.77
NEDD1-207ENST00000555114 COA1Q9GZY4 146 aa19.84■□□□□ 0.77
NEDD1-207ENST00000555114 GREM2Q9H772 168 aa19.84■□□□□ 0.77
NEDD1-207ENST00000555114 PSME4Q14997 1843 aa19.83■□□□□ 0.77
NEDD1-207ENST00000555114 PAPPA2Q9BXP8 1791 aa19.83■□□□□ 0.77
NEDD1-207ENST00000555114 LEMD3Q9Y2U8 911 aa19.83■□□□□ 0.77
NEDD1-207ENST00000555114 NEURL1BA8MQ27 555 aa19.82■□□□□ 0.76
NEDD1-207ENST00000555114 CCDC27Q2M243 656 aa19.82■□□□□ 0.76
NEDD1-207ENST00000555114 CWF19L2Q2TBE0 894 aaKnown RBP19.82■□□□□ 0.76
NEDD1-207ENST00000555114 TWISTNBQ3B726 338 aaPredicted RBP19.82■□□□□ 0.76
NEDD1-207ENST00000555114 STRIP1Q5VSL9 837 aa19.82■□□□□ 0.76
NEDD1-207ENST00000555114 TSR2Q969E8 191 aaKnown RBP19.82■□□□□ 0.76
NEDD1-207ENST00000555114 ANKRD2Q9GZV1 360 aa19.82■□□□□ 0.76
NEDD1-207ENST00000555114 AKAP11Q9UKA4 1901 aa19.82■□□□□ 0.76
NEDD1-207ENST00000555114 TTLL12Q14166 644 aaPredicted RBP19.81■□□□□ 0.76
NEDD1-207ENST00000555114 DACT2Q5SW24 774 aa19.81■□□□□ 0.76
NEDD1-207ENST00000555114 UBE3BQ7Z3V4 1068 aa19.81■□□□□ 0.76
NEDD1-207ENST00000555114 MPHOSPH8Q99549 860 aa19.81■□□□□ 0.76
NEDD1-207ENST00000555114 MYH16Q9H6N6 1097 aa19.81■□□□□ 0.76
NEDD1-207ENST00000555114 HDAC9Q9UKV0 1011 aa19.81■□□□□ 0.76
NEDD1-207ENST00000555114 H7C1W4 665 aa19.8■□□□□ 0.76
NEDD1-207ENST00000555114 SLC4A2P04920 1241 aa19.8■□□□□ 0.76
NEDD1-207ENST00000555114 CTU1Q7Z7A3 348 aaKnown RBP19.8■□□□□ 0.76
NEDD1-207ENST00000555114 MYH3P11055 1940 aa19.8■□□□□ 0.76
NEDD1-207ENST00000555114 KCNJ4P48050 445 aa19.79■□□□□ 0.76
NEDD1-207ENST00000555114 NBPF9Q3BBW0 867 aa19.79■□□□□ 0.76
NEDD1-207ENST00000555114 PLA2G12BQ9BX93 195 aa19.79■□□□□ 0.76
NEDD1-207ENST00000555114 ZNF804BA4D1E1 1349 aa19.78■□□□□ 0.76
NEDD1-207ENST00000555114 WNT10BO00744 389 aa19.78■□□□□ 0.76
NEDD1-207ENST00000555114 ITGA6P23229 1130 aa19.78■□□□□ 0.76
NEDD1-207ENST00000555114 GCKRQ14397 625 aa19.78■□□□□ 0.76
NEDD1-207ENST00000555114 TTLL5Q6EMB2 1281 aa19.78■□□□□ 0.76
NEDD1-207ENST00000555114 IL16Q14005 1332 aa19.77■□□□□ 0.76
NEDD1-207ENST00000555114 UBE2Q2LH0YL09 131 aa19.77■□□□□ 0.76
NEDD1-207ENST00000555114 FLIIQ13045 1269 aa19.77■□□□□ 0.76
NEDD1-207ENST00000555114 FKBP5Q13451 457 aaPredicted RBP19.77■□□□□ 0.76
NEDD1-207ENST00000555114 APOBEC3FQ8IUX4 373 aaKnown RBP19.77■□□□□ 0.76
NEDD1-207ENST00000555114 WWC1Q8IX03 1113 aa19.77■□□□□ 0.76
NEDD1-207ENST00000555114 WTIPA6NIX2 430 aaPredicted RBP19.76■□□□□ 0.75
NEDD1-207ENST00000555114 SLC34A2O95436 690 aa19.76■□□□□ 0.75
NEDD1-207ENST00000555114 PKN2Q16513 984 aaKnown RBP19.76■□□□□ 0.75
NEDD1-207ENST00000555114 G2E3Q7L622 706 aa19.76■□□□□ 0.75
NEDD1-207ENST00000555114 ARMC9Q7Z3E5 817 aa19.76■□□□□ 0.75
NEDD1-207ENST00000555114 DNAAF4Q8WXU2 420 aa19.76■□□□□ 0.75
NEDD1-207ENST00000555114 MXD3Q9BW11 206 aa19.76■□□□□ 0.75
NEDD1-207ENST00000555114 SCAF8Q9UPN6 1271 aaKnown RBP19.76■□□□□ 0.75
NEDD1-207ENST00000555114 SPEF2Q9C093 1822 aa19.75■□□□□ 0.75
NEDD1-207ENST00000555114 SREBF2Q12772 1141 aa19.75■□□□□ 0.75
NEDD1-207ENST00000555114 NCBP3Q53F19 620 aaKnown RBP19.75■□□□□ 0.75
NEDD1-207ENST00000555114 PRAMEF18Q5VWM3 479 aa19.75■□□□□ 0.75
NEDD1-207ENST00000555114 MOB2Q70IA6 237 aa19.75■□□□□ 0.75
NEDD1-207ENST00000555114 LINS1Q8NG48 757 aa19.75■□□□□ 0.75
NEDD1-207ENST00000555114 ANKRD18BA2A2Z9 1011 aa19.74■□□□□ 0.75
NEDD1-207ENST00000555114 SASH1O94885 1247 aa19.74■□□□□ 0.75
NEDD1-207ENST00000555114 TXNRD3Q86VQ6 643 aa19.74■□□□□ 0.75
NEDD1-207ENST00000555114 KIAA0825Q8IV33 1275 aa19.74■□□□□ 0.75
NEDD1-207ENST00000555114 CSF1RP07333 972 aa19.73■□□□□ 0.75
NEDD1-207ENST00000555114 GTF2IP78347 998 aa19.73■□□□□ 0.75
NEDD1-207ENST00000555114 TM4SF4P48230 202 aa19.72■□□□□ 0.75
NEDD1-207ENST00000555114 SOX10P56693 466 aa19.72■□□□□ 0.75
NEDD1-207ENST00000555114 CHRNDQ07001 517 aa19.72■□□□□ 0.75
NEDD1-207ENST00000555114 COL1A1P02452 1464 aaPredicted RBP19.72■□□□□ 0.75
NEDD1-207ENST00000555114 CASP7P55210 303 aa19.71■□□□□ 0.75
NEDD1-207ENST00000555114 IFIT5Q13325 482 aaKnown RBP19.71■□□□□ 0.75
NEDD1-207ENST00000555114 DLGAP5Q15398 846 aa19.71■□□□□ 0.75
NEDD1-207ENST00000555114 NOM1Q5C9Z4 860 aaKnown RBP19.71■□□□□ 0.75
NEDD1-207ENST00000555114 CD209Q9NNX6 404 aa19.71■□□□□ 0.75
NEDD1-207ENST00000555114 MYO1BO43795 1136 aa19.7■□□□□ 0.74
NEDD1-207ENST00000555114 TBC1D8O95759 1140 aa19.7■□□□□ 0.74
NEDD1-207ENST00000555114 KLRK1P26718 216 aa19.7■□□□□ 0.74
NEDD1-207ENST00000555114 ZNF804AQ7Z570 1209 aa19.7■□□□□ 0.74
NEDD1-207ENST00000555114 ZNF296Q8WUU4 475 aaPredicted RBP19.7■□□□□ 0.74
NEDD1-207ENST00000555114 CHMP3Q9Y3E7 222 aa19.7■□□□□ 0.74
NEDD1-207ENST00000555114 FANCIQ9NVI1 1328 aa19.7■□□□□ 0.74
NEDD1-207ENST00000555114 MKRN3Q13064 507 aaKnown RBP19.69■□□□□ 0.74
NEDD1-207ENST00000555114 PRKG1Q13976 671 aa19.69■□□□□ 0.74
NEDD1-207ENST00000555114 ANGEL1Q9UNK9 670 aaKnown RBP19.69■□□□□ 0.74
NEDD1-207ENST00000555114 HPS5Q9UPZ3 1129 aa19.69■□□□□ 0.74
NEDD1-207ENST00000555114 PPP2R3BQ9Y5P8 575 aa19.69■□□□□ 0.74
NEDD1-207ENST00000555114 GPR25O00155 361 aa19.68■□□□□ 0.74
NEDD1-207ENST00000555114 ALDH1A1P00352 501 aa19.68■□□□□ 0.74
NEDD1-207ENST00000555114 PTPN12Q05209 780 aaKnown RBP19.68■□□□□ 0.74
NEDD1-207ENST00000555114 TAF7LQ5H9L4 462 aa19.68■□□□□ 0.74
NEDD1-207ENST00000555114 C15orf52Q6ZUT6 534 aaKnown RBP19.68■□□□□ 0.74
NEDD1-207ENST00000555114 PPP1R12BO60237 982 aaPredicted RBP19.67■□□□□ 0.74
NEDD1-207ENST00000555114 CCDC184Q52MB2 194 aa19.67■□□□□ 0.74
NEDD1-207ENST00000555114 WDR63Q8IWG1 891 aa19.67■□□□□ 0.74
NEDD1-207ENST00000555114 MTMR14Q8NCE2 650 aa19.67■□□□□ 0.74
NEDD1-207ENST00000555114 ZBED3Q96IU2 234 aaPredicted RBP19.67■□□□□ 0.74
NEDD1-207ENST00000555114 DEFB129Q9H1M3 183 aa19.67■□□□□ 0.74
NEDD1-207ENST00000555114 ZNF646O15015 1829 aaPredicted RBP19.67■□□□□ 0.74
NEDD1-207ENST00000555114 CACNA1FO60840 1977 aa19.66■□□□□ 0.74
NEDD1-207ENST00000555114 VAMP4O75379 141 aa19.66■□□□□ 0.74
NEDD1-207ENST00000555114 TAF5LO75529 589 aa19.66■□□□□ 0.74
NEDD1-207ENST00000555114 INHBEP58166 350 aa19.66■□□□□ 0.74
NEDD1-207ENST00000555114 FKBP1AP62942 108 aaKnown RBP19.66■□□□□ 0.74
NEDD1-207ENST00000555114 CCDC57Q2TAC2 916 aa19.66■□□□□ 0.74
NEDD1-207ENST00000555114 LDLRAD1Q5T700 205 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms