RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 TACC1O75410 805 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 SLC8A3P57103 927 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 INF2Q27J81 1249 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 ZNF804AQ7Z570 1209 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 FAM114A2Q9NRY5 505 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 TLDC2A0PJX2 215 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 SSFA2P28290 1259 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 CCDC102BQ68D86 513 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 SPDYE3A6NKU9 549 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 ZEB2O60315 1214 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 PLCB4Q15147 1175 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 C4orf50Q6ZRC1 276 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.77□□□□□ -1.17
SYNE2-216ENST00000555002 NEK11Q8NG66 645 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 POGZQ7Z3K3 1410 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 F6X3S4 739 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 RRP9O43818 475 aaKnown RBP7.77□□□□□ -1.17
SYNE2-216ENST00000555002 CLUL1Q15846 466 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 PPP1R42Q7Z4L9 355 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 LIMCH1Q9UPQ0 1083 aa7.77□□□□□ -1.17
SYNE2-216ENST00000555002 HGSO14964 777 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-216ENST00000555002 RIMBP2O15034 1052 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 SH2D4BQ5SQS7 431 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 FMNL3Q8IVF7 1028 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 GBP7Q8N8V2 638 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-216ENST00000555002 CCDC110Q8TBZ0 833 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 PICK1Q9NRD5 415 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 SLC4A4Q9Y6R1 1079 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 JAKMIP2Q96AA8 810 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 C8orf37Q96NL8 207 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 ERBINQ96RT1 1412 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 ADCY5O95622 1261 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 ERCC6LQ2NKX8 1250 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 CCDC152Q4G0S7 254 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 SEL1L2Q5TEA6 688 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 BSPRYQ5W0U4 402 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 INTS8Q75QN2 995 aaKnown RBP7.76□□□□□ -1.17
SYNE2-216ENST00000555002 EXOC5O00471 708 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 NFE2L2Q16236 605 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 WDR44Q5JSH3 913 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 CASC4Q6P4E1 433 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 AFAP1L2Q8N4X5 818 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 CTAGE9A4FU28 777 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 CYLC1P35663 651 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-216ENST00000555002 SETDB1Q15047 1291 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 STX10O60499 249 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 PDE3AQ14432 1141 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 LMBR1Q8WVP7 490 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 PLEKHH1Q9ULM0 1364 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 OPA1O60313 960 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 MARCKSP29966 332 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-216ENST00000555002 GKAP1Q5VSY0 366 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-216ENST00000555002 NSD3Q9BZ95 1437 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 ZFYP08048 801 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-216ENST00000555002 PPFIA1Q13136 1202 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 WHAMMQ8TF30 809 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 DDX27Q96GQ7 796 aaKnown RBP7.76□□□□□ -1.17
SYNE2-216ENST00000555002 SPDYE16A6NNV3 312 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-216ENST00000555002 RAPGEF1Q13905 1077 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 SPDYE2Q495Y8 402 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 KANK3Q6NY19 840 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 ZSCAN30Q86W11 494 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 SAMD15Q9P1V8 674 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 PARP3Q9Y6F1 533 aa7.76□□□□□ -1.17
SYNE2-216ENST00000555002 UBE3BQ7Z3V4 1068 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 NKIRAS1Q9NYS0 192 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 SWAP70Q9UH65 585 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 PRR16Q569H4 304 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 NCOA7Q8NI08 942 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 SETDB2Q96T68 719 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 SBNO2Q9Y2G9 1366 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 CCDC171Q6TFL3 1326 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 NOP56O00567 594 aaKnown RBP7.75□□□□□ -1.17
SYNE2-216ENST00000555002 ZNF131P52739 623 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 UBASH3AP57075 661 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 UBXN1Q04323 297 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 CPLX4Q7Z7G2 160 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 CHMP6Q96FZ7 201 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 SEPT10Q9P0V9 454 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 ATP6V1E1P36543 226 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 PSPC1Q8WXF1 523 aaKnown RBP7.75□□□□□ -1.17
SYNE2-216ENST00000555002 CETN3O15182 167 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 VIMP08670 466 aaKnown RBP7.75□□□□□ -1.17
SYNE2-216ENST00000555002 SKA2Q8WVK7 121 aaPredicted RBP7.75□□□□□ -1.17
SYNE2-216ENST00000555002 HPDP32754 393 aaPredicted RBP7.75□□□□□ -1.17
SYNE2-216ENST00000555002 LACTBP83111 547 aaPredicted RBP7.75□□□□□ -1.17
SYNE2-216ENST00000555002 RRP36Q96EU6 259 aaKnown RBP7.75□□□□□ -1.17
SYNE2-216ENST00000555002 RABGAP1Q9Y3P9 1069 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 CTAGE15A4D2H0 777 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 CCDC169A6NNP5 214 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 NEMFO60524 1076 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 CTAGE8P0CG41 777 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 RNASE9P60153 205 aaKnown RBP7.75□□□□□ -1.17
SYNE2-216ENST00000555002 TRPC3Q13507 836 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 CTAGE6Q86UF2 777 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 CCDC125Q86Z20 511 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 CTAGE4Q8IX94 777 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 FNBP4Q8N3X1 1017 aaPredicted RBP7.75□□□□□ -1.17
SYNE2-216ENST00000555002 FRMD4BQ9Y2L6 1034 aa7.75□□□□□ -1.17
SYNE2-216ENST00000555002 KLF18A0A0U1RQI7 1052 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms