RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 DSG3P32926 999 aa12.44□□□□□ -0.42
TMEM253-204ENST00000554844 NEXNQ0ZGT2 675 aa12.44□□□□□ -0.42
TMEM253-204ENST00000554844 CCDC30Q5VVM6 783 aa12.44□□□□□ -0.42
TMEM253-204ENST00000554844 PODNQ7Z5L7 613 aa12.44□□□□□ -0.42
TMEM253-204ENST00000554844 CSRNP1Q96S65 589 aa12.44□□□□□ -0.42
TMEM253-204ENST00000554844 PHAXQ9H814 394 aaKnown RBP12.44□□□□□ -0.42
TMEM253-204ENST00000554844 IFT57Q9NWB7 429 aa12.44□□□□□ -0.42
TMEM253-204ENST00000554844 ADAMTS8Q9UP79 889 aa12.44□□□□□ -0.42
TMEM253-204ENST00000554844 ASTN2O75129 1339 aaPredicted RBP12.43□□□□□ -0.42
TMEM253-204ENST00000554844 MYO3BQ8WXR4 1341 aa12.43□□□□□ -0.42
TMEM253-204ENST00000554844 ELL2O00472 640 aaPredicted RBP12.43□□□□□ -0.42
TMEM253-204ENST00000554844 DDX10Q13206 875 aaKnown RBP12.43□□□□□ -0.42
TMEM253-204ENST00000554844 PKN2Q16513 984 aaKnown RBP12.43□□□□□ -0.42
TMEM253-204ENST00000554844 PCDH10Q9P2E7 1040 aa12.43□□□□□ -0.42
TMEM253-204ENST00000554844 PDE4DIPQ5VU43 2346 aa12.43□□□□□ -0.42
TMEM253-204ENST00000554844 COL4A1P02462 1669 aa12.42□□□□□ -0.42
TMEM253-204ENST00000554844 PSME4Q14997 1843 aa12.42□□□□□ -0.42
TMEM253-204ENST00000554844 CTSWP56202 376 aa12.42□□□□□ -0.42
TMEM253-204ENST00000554844 METTL22Q9BUU2 404 aaPredicted RBP12.42□□□□□ -0.42
TMEM253-204ENST00000554844 MED23Q9ULK4 1368 aa12.42□□□□□ -0.42
TMEM253-204ENST00000554844 IGHMBP2P38935 993 aaKnown RBP12.41□□□□□ -0.42
TMEM253-204ENST00000554844 MMP14P50281 582 aa12.41□□□□□ -0.42
TMEM253-204ENST00000554844 SREBF2Q12772 1141 aa12.41□□□□□ -0.42
TMEM253-204ENST00000554844 ARMC9Q7Z3E5 817 aa12.41□□□□□ -0.42
TMEM253-204ENST00000554844 JARID2Q92833 1246 aaPredicted RBP12.41□□□□□ -0.42
TMEM253-204ENST00000554844 STK31Q9BXU1 1019 aa12.41□□□□□ -0.42
TMEM253-204ENST00000554844 MAP3K2Q9Y2U5 619 aa12.41□□□□□ -0.42
TMEM253-204ENST00000554844 UBE2Q2LH0YL09 131 aa12.4□□□□□ -0.42
TMEM253-204ENST00000554844 COA1Q9GZY4 146 aa12.4□□□□□ -0.42
TMEM253-204ENST00000554844 BSDC1Q9NW68 430 aaPredicted RBP12.4□□□□□ -0.42
TMEM253-204ENST00000554844 FBXO3Q9UK99 471 aa12.4□□□□□ -0.42
TMEM253-204ENST00000554844 APAF1O14727 1248 aa12.39□□□□□ -0.43
TMEM253-204ENST00000554844 ZNF853P0CG23 659 aa12.39□□□□□ -0.43
TMEM253-204ENST00000554844 KCNJ4P48050 445 aa12.39□□□□□ -0.43
TMEM253-204ENST00000554844 CCT4P50991 539 aaKnown RBP12.39□□□□□ -0.43
TMEM253-204ENST00000554844 STRIP1Q5VSL9 837 aa12.39□□□□□ -0.43
TMEM253-204ENST00000554844 APOBEC3FQ8IUX4 373 aaKnown RBP12.39□□□□□ -0.43
TMEM253-204ENST00000554844 GMLQ99445 158 aa12.39□□□□□ -0.43
TMEM253-204ENST00000554844 HPS5Q9UPZ3 1129 aa12.39□□□□□ -0.43
TMEM253-204ENST00000554844 MYH3P11055 1940 aa12.39□□□□□ -0.43
TMEM253-204ENST00000554844 TBC1D8O95759 1140 aa12.38□□□□□ -0.43
TMEM253-204ENST00000554844 CACNB1Q02641 598 aaPredicted RBP12.38□□□□□ -0.43
TMEM253-204ENST00000554844 MKRN3Q13064 507 aaKnown RBP12.38□□□□□ -0.43
TMEM253-204ENST00000554844 NBPF9Q3BBW0 867 aa12.38□□□□□ -0.43
TMEM253-204ENST00000554844 PRPF38BQ5VTL8 546 aaKnown RBP12.38□□□□□ -0.43
TMEM253-204ENST00000554844 KSR2Q6VAB6 950 aa12.38□□□□□ -0.43
TMEM253-204ENST00000554844 MOB2Q70IA6 237 aa12.38□□□□□ -0.43
TMEM253-204ENST00000554844 ZNF296Q8WUU4 475 aaPredicted RBP12.38□□□□□ -0.43
TMEM253-204ENST00000554844 MPHOSPH8Q99549 860 aa12.38□□□□□ -0.43
TMEM253-204ENST00000554844 ANKRD2Q9GZV1 360 aa12.38□□□□□ -0.43
TMEM253-204ENST00000554844 MINPP1Q9UNW1 487 aa12.38□□□□□ -0.43
TMEM253-204ENST00000554844 LEMD3Q9Y2U8 911 aa12.38□□□□□ -0.43
TMEM253-204ENST00000554844 SPEF2Q9C093 1822 aa12.38□□□□□ -0.43
TMEM253-204ENST00000554844 PI4KAP2A4QPH2 592 aa12.37□□□□□ -0.43
TMEM253-204ENST00000554844 WNT10BO00744 389 aa12.37□□□□□ -0.43
TMEM253-204ENST00000554844 DACT2Q5SW24 774 aa12.37□□□□□ -0.43
TMEM253-204ENST00000554844 PRAMEF18Q5VWM3 479 aa12.37□□□□□ -0.43
TMEM253-204ENST00000554844 PI4KAP1Q8N8J0 262 aa12.37□□□□□ -0.43
TMEM253-204ENST00000554844 C8orf58Q8NAV2 365 aa12.37□□□□□ -0.43
TMEM253-204ENST00000554844 TTLL11Q8NHH1 800 aa12.37□□□□□ -0.43
TMEM253-204ENST00000554844 GREM2Q9H772 168 aa12.37□□□□□ -0.43
TMEM253-204ENST00000554844 SCAF8Q9UPN6 1271 aaKnown RBP12.37□□□□□ -0.43
TMEM253-204ENST00000554844 GPR25O00155 361 aa12.36□□□□□ -0.43
TMEM253-204ENST00000554844 FKTNO75072 461 aa12.36□□□□□ -0.43
TMEM253-204ENST00000554844 SASH1O94885 1247 aa12.36□□□□□ -0.43
TMEM253-204ENST00000554844 ALDH1A1P00352 501 aa12.36□□□□□ -0.43
TMEM253-204ENST00000554844 TM4SF4P48230 202 aa12.36□□□□□ -0.43
TMEM253-204ENST00000554844 PRKG1Q13976 671 aa12.36□□□□□ -0.43
TMEM253-204ENST00000554844 TTLL5Q6EMB2 1281 aa12.36□□□□□ -0.43
TMEM253-204ENST00000554844 FBXO46Q6PJ61 603 aaPredicted RBP12.36□□□□□ -0.43
TMEM253-204ENST00000554844 MXD3Q9BW11 206 aa12.36□□□□□ -0.43
TMEM253-204ENST00000554844 MYH16Q9H6N6 1097 aa12.36□□□□□ -0.43
TMEM253-204ENST00000554844 ZNF804BA4D1E1 1349 aa12.36□□□□□ -0.43
TMEM253-204ENST00000554844 COL1A1P02452 1464 aaPredicted RBP12.35□□□□□ -0.43
TMEM253-204ENST00000554844 MYO1BO43795 1136 aa12.35□□□□□ -0.43
TMEM253-204ENST00000554844 NOM1Q5C9Z4 860 aaKnown RBP12.35□□□□□ -0.43
TMEM253-204ENST00000554844 UBE3BQ7Z3V4 1068 aa12.35□□□□□ -0.43
TMEM253-204ENST00000554844 KIAA0825Q8IV33 1275 aa12.35□□□□□ -0.43
TMEM253-204ENST00000554844 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.35□□□□□ -0.43
TMEM253-204ENST00000554844 ANGEL1Q9UNK9 670 aaKnown RBP12.35□□□□□ -0.43
TMEM253-204ENST00000554844 TNRC18O15417 2968 aaPredicted RBP12.35□□□□□ -0.43
TMEM253-204ENST00000554844 NEURL1BA8MQ27 555 aa12.34□□□□□ -0.43
TMEM253-204ENST00000554844 IGKV5-2P06315 115 aa12.34□□□□□ -0.43
TMEM253-204ENST00000554844 ITGA6P23229 1130 aa12.34□□□□□ -0.43
TMEM253-204ENST00000554844 GTF2IP78347 998 aa12.34□□□□□ -0.43
TMEM253-204ENST00000554844 DLGAP5Q15398 846 aa12.34□□□□□ -0.43
TMEM253-204ENST00000554844 CWF19L2Q2TBE0 894 aaKnown RBP12.34□□□□□ -0.43
TMEM253-204ENST00000554844 MANSC4A6NHS7 340 aaPredicted RBP12.33□□□□□ -0.44
TMEM253-204ENST00000554844 PPP1R12BO60237 982 aaPredicted RBP12.33□□□□□ -0.44
TMEM253-204ENST00000554844 INHBEP58166 350 aa12.33□□□□□ -0.44
TMEM253-204ENST00000554844 PTPN12Q05209 780 aaKnown RBP12.33□□□□□ -0.44
TMEM253-204ENST00000554844 SLC10A4Q96EP9 437 aa12.33□□□□□ -0.44
TMEM253-204ENST00000554844 PRKRIP1Q9H875 184 aaPredicted RBP12.33□□□□□ -0.44
TMEM253-204ENST00000554844 PPP2R3BQ9Y5P8 575 aa12.33□□□□□ -0.44
TMEM253-204ENST00000554844 ANKRD18BA2A2Z9 1011 aa12.32□□□□□ -0.44
TMEM253-204ENST00000554844 H7C1W4 665 aa12.32□□□□□ -0.44
TMEM253-204ENST00000554844 TWISTNBQ3B726 338 aaPredicted RBP12.32□□□□□ -0.44
TMEM253-204ENST00000554844 SPRYD7Q5W111 196 aa12.32□□□□□ -0.44
TMEM253-204ENST00000554844 OTUD7BQ6GQQ9 843 aa12.32□□□□□ -0.44
TMEM253-204ENST00000554844 ZNF804AQ7Z570 1209 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms