RNA–Protein interactions for RNA: ENST00000554835.1

PRKCH-210, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-210ENST00000554835 SLC4A2P04920 1241 aa23.33■■□□□ 1.33
PRKCH-210ENST00000554835 NEXNQ0ZGT2 675 aa23.33■■□□□ 1.33
PRKCH-210ENST00000554835 UBE3BQ7Z3V4 1068 aa23.33■■□□□ 1.33
PRKCH-210ENST00000554835 TXNRD3Q86VQ6 643 aa23.33■■□□□ 1.33
PRKCH-210ENST00000554835 SLC10A3P09131 477 aa23.32■■□□□ 1.32
PRKCH-210ENST00000554835 CCT4P50991 539 aaKnown RBP23.32■■□□□ 1.32
PRKCH-210ENST00000554835 CASP7P55210 303 aa23.32■■□□□ 1.32
PRKCH-210ENST00000554835 RGS19P49795 217 aa23.31■■□□□ 1.32
PRKCH-210ENST00000554835 DACT2Q5SW24 774 aa23.31■■□□□ 1.32
PRKCH-210ENST00000554835 CSRNP1Q96S65 589 aa23.31■■□□□ 1.32
PRKCH-210ENST00000554835 KLRK1P26718 216 aa23.3■■□□□ 1.32
PRKCH-210ENST00000554835 DGKZQ13574 1117 aa23.3■■□□□ 1.32
PRKCH-210ENST00000554835 GCKRQ14397 625 aa23.3■■□□□ 1.32
PRKCH-210ENST00000554835 NBPF9Q3BBW0 867 aa23.3■■□□□ 1.32
PRKCH-210ENST00000554835 PLA2G12BQ9BX93 195 aa23.3■■□□□ 1.32
PRKCH-210ENST00000554835 RNF186Q9NXI6 227 aa23.3■■□□□ 1.32
PRKCH-210ENST00000554835 PITPNM2Q9BZ72 1349 aa23.3■■□□□ 1.32
PRKCH-210ENST00000554835 FLIIQ13045 1269 aa23.29■■□□□ 1.32
PRKCH-210ENST00000554835 MOB2Q70IA6 237 aa23.29■■□□□ 1.32
PRKCH-210ENST00000554835 SAGE1Q9NXZ1 904 aa23.29■■□□□ 1.32
PRKCH-210ENST00000554835 AKAP11Q9UKA4 1901 aa23.29■■□□□ 1.32
PRKCH-210ENST00000554835 IL16Q14005 1332 aa23.29■■□□□ 1.32
PRKCH-210ENST00000554835 PAPPA2Q9BXP8 1791 aa23.28■■□□□ 1.32
PRKCH-210ENST00000554835 TRPA1O75762 1119 aa23.28■■□□□ 1.32
PRKCH-210ENST00000554835 PRAMEF18Q5VWM3 479 aa23.28■■□□□ 1.32
PRKCH-210ENST00000554835 RASAL3Q86YV0 1011 aa23.28■■□□□ 1.32
PRKCH-210ENST00000554835 CSF1RP07333 972 aa23.27■■□□□ 1.32
PRKCH-210ENST00000554835 ITGA6P23229 1130 aa23.27■■□□□ 1.32
PRKCH-210ENST00000554835 FANCIQ9NVI1 1328 aa23.27■■□□□ 1.32
PRKCH-210ENST00000554835 STRIP1Q5VSL9 837 aa23.26■■□□□ 1.31
PRKCH-210ENST00000554835 DNAAF4Q8WXU2 420 aa23.26■■□□□ 1.31
PRKCH-210ENST00000554835 COA1Q9GZY4 146 aa23.26■■□□□ 1.31
PRKCH-210ENST00000554835 LEMD3Q9Y2U8 911 aa23.26■■□□□ 1.31
PRKCH-210ENST00000554835 WNT10BO00744 389 aa23.25■■□□□ 1.31
PRKCH-210ENST00000554835 IGHMBP2P38935 993 aaKnown RBP23.25■■□□□ 1.31
PRKCH-210ENST00000554835 FKBP1BP68106 108 aa23.25■■□□□ 1.31
PRKCH-210ENST00000554835 NCBP3Q53F19 620 aaKnown RBP23.25■■□□□ 1.31
PRKCH-210ENST00000554835 ZNF804BA4D1E1 1349 aa23.25■■□□□ 1.31
PRKCH-210ENST00000554835 CACNA1FO60840 1977 aa23.25■■□□□ 1.31
PRKCH-210ENST00000554835 VAMP4O75379 141 aa23.24■■□□□ 1.31
PRKCH-210ENST00000554835 MLLT1Q03111 559 aaPredicted RBP23.24■■□□□ 1.31
PRKCH-210ENST00000554835 FKBP5Q13451 457 aaPredicted RBP23.24■■□□□ 1.31
PRKCH-210ENST00000554835 FBXW7Q969H0 707 aa23.24■■□□□ 1.31
PRKCH-210ENST00000554835 UBE2Q2LH0YL09 131 aa23.23■■□□□ 1.31
PRKCH-210ENST00000554835 SNAP23O00161 211 aa23.23■■□□□ 1.31
PRKCH-210ENST00000554835 LINS1Q8NG48 757 aa23.23■■□□□ 1.31
PRKCH-210ENST00000554835 TNRC18O15417 2968 aaPredicted RBP23.23■■□□□ 1.31
PRKCH-210ENST00000554835 SASH1O94885 1247 aa23.22■■□□□ 1.31
PRKCH-210ENST00000554835 CHRNDQ07001 517 aa23.22■■□□□ 1.31
PRKCH-210ENST00000554835 TTLL5Q6EMB2 1281 aa23.22■■□□□ 1.31
PRKCH-210ENST00000554835 ANKRD2Q9GZV1 360 aa23.22■■□□□ 1.31
PRKCH-210ENST00000554835 MYH16Q9H6N6 1097 aa23.22■■□□□ 1.31
PRKCH-210ENST00000554835 MYO3BQ8WXR4 1341 aa23.22■■□□□ 1.31
PRKCH-210ENST00000554835 IRS2Q9Y4H2 1338 aa23.22■■□□□ 1.31
PRKCH-210ENST00000554835 OGFOD1Q8N543 542 aa23.21■■□□□ 1.31
PRKCH-210ENST00000554835 ZBED3Q96IU2 234 aaPredicted RBP23.21■■□□□ 1.31
PRKCH-210ENST00000554835 MPHOSPH8Q99549 860 aa23.21■■□□□ 1.31
PRKCH-210ENST00000554835 SALL2Q9Y467 1007 aaPredicted RBP23.21■■□□□ 1.31
PRKCH-210ENST00000554835 F6X3S4 739 aa23.2■■□□□ 1.3
PRKCH-210ENST00000554835 FOXO4P98177 505 aa23.2■■□□□ 1.3
PRKCH-210ENST00000554835 EXOSC9Q06265 439 aaKnown RBP23.2■■□□□ 1.3
PRKCH-210ENST00000554835 KIAA0825Q8IV33 1275 aa23.2■■□□□ 1.3
PRKCH-210ENST00000554835 SPINK5Q9NQ38 1064 aaPredicted RBP23.2■■□□□ 1.3
PRKCH-210ENST00000554835 A0A1B0GUL6 1792 aa23.19■■□□□ 1.3
PRKCH-210ENST00000554835 GTF2IP78347 998 aa23.19■■□□□ 1.3
PRKCH-210ENST00000554835 MRS2Q9HD23 443 aa23.19■■□□□ 1.3
PRKCH-210ENST00000554835 TAF5LO75529 589 aa23.18■■□□□ 1.3
PRKCH-210ENST00000554835 BEND3Q5T5X7 828 aa23.18■■□□□ 1.3
PRKCH-210ENST00000554835 WDR63Q8IWG1 891 aa23.18■■□□□ 1.3
PRKCH-210ENST00000554835 REM2Q8IYK8 340 aaPredicted RBP23.18■■□□□ 1.3
PRKCH-210ENST00000554835 CD209Q9NNX6 404 aa23.18■■□□□ 1.3
PRKCH-210ENST00000554835 CERS5Q8N5B7 392 aa23.17■■□□□ 1.3
PRKCH-210ENST00000554835 HELBQ8NG08 1087 aaPredicted RBP23.17■■□□□ 1.3
PRKCH-210ENST00000554835 ANKRD18BA2A2Z9 1011 aa23.16■■□□□ 1.3
PRKCH-210ENST00000554835 EPHA10Q5JZY3 1008 aa23.16■■□□□ 1.3
PRKCH-210ENST00000554835 KCNJ4P48050 445 aa23.15■■□□□ 1.3
PRKCH-210ENST00000554835 MMP14P50281 582 aa23.15■■□□□ 1.3
PRKCH-210ENST00000554835 TTLL12Q14166 644 aaPredicted RBP23.15■■□□□ 1.3
PRKCH-210ENST00000554835 C15orf52Q6ZUT6 534 aaKnown RBP23.15■■□□□ 1.3
PRKCH-210ENST00000554835 PCDHAC2Q9Y5I4 1007 aa23.15■■□□□ 1.3
PRKCH-210ENST00000554835 PTPN12Q05209 780 aaKnown RBP23.14■■□□□ 1.29
PRKCH-210ENST00000554835 TBC1D8O95759 1140 aa23.13■■□□□ 1.29
PRKCH-210ENST00000554835 TM4SF4P48230 202 aa23.13■■□□□ 1.29
PRKCH-210ENST00000554835 MKRN3Q13064 507 aaKnown RBP23.13■■□□□ 1.29
PRKCH-210ENST00000554835 IFIT5Q13325 482 aaKnown RBP23.13■■□□□ 1.29
PRKCH-210ENST00000554835 PRKG1Q13976 671 aa23.13■■□□□ 1.29
PRKCH-210ENST00000554835 CTU1Q7Z7A3 348 aaKnown RBP23.13■■□□□ 1.29
PRKCH-210ENST00000554835 HDAC9Q9UKV0 1011 aa23.13■■□□□ 1.29
PRKCH-210ENST00000554835 FZD1Q9UP38 647 aa23.13■■□□□ 1.29
PRKCH-210ENST00000554835 LMBR1LQ6UX01 489 aa23.12■■□□□ 1.29
PRKCH-210ENST00000554835 APOBEC3FQ8IUX4 373 aaKnown RBP23.12■■□□□ 1.29
PRKCH-210ENST00000554835 ZNF594Q96JF6 807 aaPredicted RBP23.12■■□□□ 1.29
PRKCH-210ENST00000554835 IL1R1P14778 569 aa23.11■■□□□ 1.29
PRKCH-210ENST00000554835 NF2P35240 595 aa23.11■■□□□ 1.29
PRKCH-210ENST00000554835 LDLRAD1Q5T700 205 aa23.11■■□□□ 1.29
PRKCH-210ENST00000554835 CHMP3Q9Y3E7 222 aa23.11■■□□□ 1.29
PRKCH-210ENST00000554835 AOX1Q06278 1338 aa23.1■■□□□ 1.29
PRKCH-210ENST00000554835 SOX10P56693 466 aa23.1■■□□□ 1.29
PRKCH-210ENST00000554835 MTMR14Q8NCE2 650 aa23.1■■□□□ 1.29
PRKCH-210ENST00000554835 ZNF296Q8WUU4 475 aaPredicted RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms