RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 DTWD1Q8N5C7 304 aa7.21□□□□□ -1.26
SCFD1-214ENST00000554819 TMEM102Q8N9M5 508 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-214ENST00000554819 TRIM33Q9UPN9 1127 aa7.21□□□□□ -1.26
SCFD1-214ENST00000554819 NFKBIEO00221 500 aa7.2□□□□□ -1.26
SCFD1-214ENST00000554819 SPATA31C1P0DKV0 1188 aa7.2□□□□□ -1.26
SCFD1-214ENST00000554819 PTPRAP18433 802 aa7.2□□□□□ -1.26
SCFD1-214ENST00000554819 CCDC27Q2M243 656 aa7.2□□□□□ -1.26
SCFD1-214ENST00000554819 TMEM151AQ8N4L1 468 aa7.2□□□□□ -1.26
SCFD1-214ENST00000554819 POP1Q99575 1024 aaKnown RBP7.2□□□□□ -1.26
SCFD1-214ENST00000554819 ZKSCAN3Q9BRR0 538 aa7.2□□□□□ -1.26
SCFD1-214ENST00000554819 PPME1Q9Y570 386 aa7.2□□□□□ -1.26
SCFD1-214ENST00000554819 A0A0A0MRY4 1105 aa7.19□□□□□ -1.26
SCFD1-214ENST00000554819 GDF11O95390 407 aa7.19□□□□□ -1.26
SCFD1-214ENST00000554819 COL8A1P27658 744 aa7.19□□□□□ -1.26
SCFD1-214ENST00000554819 CDC27P30260 824 aa7.19□□□□□ -1.26
SCFD1-214ENST00000554819 PEAR1Q5VY43 1037 aaPredicted RBP7.19□□□□□ -1.26
SCFD1-214ENST00000554819 USPL1Q5W0Q7 1092 aa7.19□□□□□ -1.26
SCFD1-214ENST00000554819 ILDR2Q71H61 639 aa7.19□□□□□ -1.26
SCFD1-214ENST00000554819 DCAF11Q8TEB1 546 aa7.19□□□□□ -1.26
SCFD1-214ENST00000554819 NXPE3Q969Y0 559 aa7.19□□□□□ -1.26
SCFD1-214ENST00000554819 CCDC74AQ96AQ1 378 aa7.19□□□□□ -1.26
SCFD1-214ENST00000554819 LACRTQ9GZZ8 138 aa7.19□□□□□ -1.26
SCFD1-214ENST00000554819 ADAM19Q9H013 955 aa7.19□□□□□ -1.26
SCFD1-214ENST00000554819 SRA1Q9HD15 236 aaKnown RBP7.19□□□□□ -1.26
SCFD1-214ENST00000554819 ACPPP15309 386 aa7.18□□□□□ -1.26
SCFD1-214ENST00000554819 MAPK8P45983 427 aa7.18□□□□□ -1.26
SCFD1-214ENST00000554819 BAG6P46379 1132 aa7.18□□□□□ -1.26
SCFD1-214ENST00000554819 GSK3AP49840 483 aa7.18□□□□□ -1.26
SCFD1-214ENST00000554819 CABP4P57796 275 aa7.18□□□□□ -1.26
SCFD1-214ENST00000554819 FMR1Q06787 632 aaKnown RBP eCLIP7.18□□□□□ -1.26
SCFD1-214ENST00000554819 KIAA0319Q5VV43 1072 aa7.18□□□□□ -1.26
SCFD1-214ENST00000554819 MAP4K3Q8IVH8 894 aa7.18□□□□□ -1.26
SCFD1-214ENST00000554819 DCAF5Q96JK2 942 aa7.18□□□□□ -1.26
SCFD1-214ENST00000554819 LATS2Q9NRM7 1088 aa7.18□□□□□ -1.26
SCFD1-214ENST00000554819 NLRP2Q9NX02 1062 aa7.18□□□□□ -1.26
SCFD1-214ENST00000554819 PNMA6FA0A0J9YX94 578 aa7.17□□□□□ -1.26
SCFD1-214ENST00000554819 A0A1W2PP55 124 aa7.17□□□□□ -1.26
SCFD1-214ENST00000554819 TRPA1O75762 1119 aa7.17□□□□□ -1.26
SCFD1-214ENST00000554819 ERCC3P19447 782 aa7.17□□□□□ -1.26
SCFD1-214ENST00000554819 FGD1P98174 961 aa7.17□□□□□ -1.26
SCFD1-214ENST00000554819 COL19A1Q14993 1142 aa7.17□□□□□ -1.26
SCFD1-214ENST00000554819 ENOX2Q16206 610 aaKnown RBP7.17□□□□□ -1.26
SCFD1-214ENST00000554819 FAM117BQ6P1L5 589 aa7.17□□□□□ -1.26
SCFD1-214ENST00000554819 NACC1Q96RE7 527 aa7.17□□□□□ -1.26
SCFD1-214ENST00000554819 BHLHE41Q9C0J9 482 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-214ENST00000554819 NPHS2Q9NP85 383 aa7.17□□□□□ -1.26
SCFD1-214ENST00000554819 ANKRD33BA6NCL7 494 aa7.16□□□□□ -1.26
SCFD1-214ENST00000554819 GADD45BO75293 160 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-214ENST00000554819 APBA3O96018 575 aa7.16□□□□□ -1.26
SCFD1-214ENST00000554819 ELNP15502 786 aa7.16□□□□□ -1.26
SCFD1-214ENST00000554819 ATP2B2Q01814 1243 aa7.16□□□□□ -1.26
SCFD1-214ENST00000554819 ALG1LQ6GMV1 187 aa7.16□□□□□ -1.26
SCFD1-214ENST00000554819 FBXO11Q86XK2 927 aa7.16□□□□□ -1.26
SCFD1-214ENST00000554819 FMR1NBQ8N0W7 255 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-214ENST00000554819 ASAP3Q8TDY4 903 aa7.16□□□□□ -1.26
SCFD1-214ENST00000554819 FBF1Q8TES7 1133 aa7.16□□□□□ -1.26
SCFD1-214ENST00000554819 BSNDQ8WZ55 320 aa7.16□□□□□ -1.26
SCFD1-214ENST00000554819 EHD4Q9H223 541 aa7.16□□□□□ -1.26
SCFD1-214ENST00000554819 LIN7BQ9HAP6 207 aa7.16□□□□□ -1.26
SCFD1-214ENST00000554819 PPP4R2Q9NY27 417 aa7.16□□□□□ -1.26
SCFD1-214ENST00000554819 FAM229AH3BQW9 127 aa7.15□□□□□ -1.26
SCFD1-214ENST00000554819 CCNJLQ8IV13 435 aa7.15□□□□□ -1.26
SCFD1-214ENST00000554819 HHIPQ96QV1 700 aa7.15□□□□□ -1.26
SCFD1-214ENST00000554819 SH2B1Q9NRF2 756 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-214ENST00000554819 TRAK1Q9UPV9 953 aa7.15□□□□□ -1.26
SCFD1-214ENST00000554819 LINC01387J3KSC0 135 aa7.14□□□□□ -1.27
SCFD1-214ENST00000554819 TMCO4Q5TGY1 634 aa7.14□□□□□ -1.27
SCFD1-214ENST00000554819 EPS8L3Q8TE67 593 aaKnown RBP7.14□□□□□ -1.27
SCFD1-214ENST00000554819 WNT8BQ93098 351 aa7.14□□□□□ -1.27
SCFD1-214ENST00000554819 TCF12Q99081 682 aa7.14□□□□□ -1.27
SCFD1-214ENST00000554819 SOX13Q9UN79 622 aa7.14□□□□□ -1.27
SCFD1-214ENST00000554819 KRBA1A5PL33 1030 aa7.13□□□□□ -1.27
SCFD1-214ENST00000554819 C9orf172C9J069 976 aa7.13□□□□□ -1.27
SCFD1-214ENST00000554819 H3BRJ5 948 aa7.13□□□□□ -1.27
SCFD1-214ENST00000554819 P4HBP07237 508 aaKnown RBP7.13□□□□□ -1.27
SCFD1-214ENST00000554819 EPHA1P21709 976 aa7.13□□□□□ -1.27
SCFD1-214ENST00000554819 ARL4DP49703 201 aa7.13□□□□□ -1.27
SCFD1-214ENST00000554819 SETDB1Q15047 1291 aa7.13□□□□□ -1.27
SCFD1-214ENST00000554819 GRIK4Q16099 956 aa7.13□□□□□ -1.27
SCFD1-214ENST00000554819 ADAMTSL4Q6UY14 1074 aa7.13□□□□□ -1.27
SCFD1-214ENST00000554819 DNAJC14Q6Y2X3 702 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-214ENST00000554819 KLHL23Q8NBE8 558 aa7.13□□□□□ -1.27
SCFD1-214ENST00000554819 A0A096LPE4 126 aa7.12□□□□□ -1.27
SCFD1-214ENST00000554819 A0A1W2PPZ6 126 aa7.12□□□□□ -1.27
SCFD1-214ENST00000554819 EIF4EBP3O60516 100 aaPredicted RBP7.12□□□□□ -1.27
SCFD1-214ENST00000554819 DEAF1O75398 565 aaPredicted RBP7.12□□□□□ -1.27
SCFD1-214ENST00000554819 CDC25BP30305 580 aa7.12□□□□□ -1.27
SCFD1-214ENST00000554819 PIP4K2BP78356 416 aa7.12□□□□□ -1.27
SCFD1-214ENST00000554819 NRG1Q02297 640 aaPredicted RBP7.12□□□□□ -1.27
SCFD1-214ENST00000554819 EAPPQ56P03 285 aaPredicted RBP7.12□□□□□ -1.27
SCFD1-214ENST00000554819 IGF2-ASQ6U949 168 aa7.12□□□□□ -1.27
SCFD1-214ENST00000554819 ZFYVE1Q9HBF4 777 aa7.12□□□□□ -1.27
SCFD1-214ENST00000554819 OSGEPQ9NPF4 335 aa7.12□□□□□ -1.27
SCFD1-214ENST00000554819 GIPC1O14908 333 aa7.11□□□□□ -1.27
SCFD1-214ENST00000554819 FSCN2O14926 492 aa7.11□□□□□ -1.27
SCFD1-214ENST00000554819 LDHBP07195 334 aaKnown RBP7.11□□□□□ -1.27
SCFD1-214ENST00000554819 GRIA4P48058 902 aa7.11□□□□□ -1.27
SCFD1-214ENST00000554819 PTPN12Q05209 780 aaKnown RBP7.11□□□□□ -1.27
SCFD1-214ENST00000554819 IKBKEQ14164 716 aa7.11□□□□□ -1.27
SCFD1-214ENST00000554819 GRM2Q14416 872 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms