RNA–Protein interactions for RNA: ENST00000554639.5

MEG3-224, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 1,712 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-224ENST00000554639 SYNE4Q8N205 404 aa21.29■■□□□ 1
MEG3-224ENST00000554639 LPIN2Q92539 896 aa21.29■■□□□ 1
MEG3-224ENST00000554639 ACSBG1Q96GR2 724 aa21.29■■□□□ 1
MEG3-224ENST00000554639 ARID4AP29374 1257 aaPredicted RBP21.28■■□□□ 1
MEG3-224ENST00000554639 ST3GAL1Q11201 340 aa21.28■■□□□ 1
MEG3-224ENST00000554639 ITPK1Q13572 414 aa21.28■■□□□ 1
MEG3-224ENST00000554639 SUSD4Q5VX71 490 aa21.28■■□□□ 1
MEG3-224ENST00000554639 AGXT2Q9BYV1 514 aa21.28■■□□□ 1
MEG3-224ENST00000554639 ATRNO75882 1429 aa21.27■■□□□ 1
MEG3-224ENST00000554639 CCDC152Q4G0S7 254 aa21.27■■□□□ 1
MEG3-224ENST00000554639 CCDC85AQ96PX6 553 aaPredicted RBP21.27■■□□□ 1
MEG3-224ENST00000554639 LLPHQ9BRT6 129 aaKnown RBP21.27■■□□□ 1
MEG3-224ENST00000554639 MTMR6Q9Y217 621 aa21.27■■□□□ 1
MEG3-224ENST00000554639 AKAP11Q9UKA4 1901 aa21.27■□□□□ 0.99
MEG3-224ENST00000554639 FGFR2P21802 821 aa21.26■□□□□ 0.99
MEG3-224ENST00000554639 FOXD4L5Q5VV16 416 aaPredicted RBP21.26■□□□□ 0.99
MEG3-224ENST00000554639 FOXD4L4Q8WXT5 416 aaPredicted RBP21.26■□□□□ 0.99
MEG3-224ENST00000554639 TAF6LQ9Y6J9 622 aa21.26■□□□□ 0.99
MEG3-224ENST00000554639 MYH14Q7Z406 1995 aaKnown RBP21.26■□□□□ 0.99
MEG3-224ENST00000554639 PHF14O94880 888 aa21.26■□□□□ 0.99
MEG3-224ENST00000554639 ZAP70P43403 619 aa21.26■□□□□ 0.99
MEG3-224ENST00000554639 PIP4K2BP78356 416 aa21.26■□□□□ 0.99
MEG3-224ENST00000554639 GAS2L3Q86XJ1 694 aa21.26■□□□□ 0.99
MEG3-224ENST00000554639 FNBP4Q8N3X1 1017 aaPredicted RBP21.26■□□□□ 0.99
MEG3-224ENST00000554639 GTF3C6Q969F1 213 aa21.26■□□□□ 0.99
MEG3-224ENST00000554639 LARP6Q9BRS8 491 aaKnown RBP21.26■□□□□ 0.99
MEG3-224ENST00000554639 DDX60Q8IY21 1712 aaKnown RBP21.26■□□□□ 0.99
MEG3-224ENST00000554639 BCL9LQ86UU0 1499 aa21.26■□□□□ 0.99
MEG3-224ENST00000554639 CNTNAP4Q9C0A0 1308 aa21.25■□□□□ 0.99
MEG3-224ENST00000554639 EXOSC10Q01780 885 aaKnown RBP21.25■□□□□ 0.99
MEG3-224ENST00000554639 LARP1BQ659C4 914 aaKnown RBP21.25■□□□□ 0.99
MEG3-224ENST00000554639 OSBP2Q969R2 916 aa21.25■□□□□ 0.99
MEG3-224ENST00000554639 LAMA4Q16363 1823 aa21.24■□□□□ 0.99
MEG3-224ENST00000554639 NTSR2O95665 410 aa21.24■□□□□ 0.99
MEG3-224ENST00000554639 SLC5A1P13866 664 aa21.24■□□□□ 0.99
MEG3-224ENST00000554639 UBE3CQ15386 1083 aa21.24■□□□□ 0.99
MEG3-224ENST00000554639 Q6ZUG5 572 aa21.24■□□□□ 0.99
MEG3-224ENST00000554639 NECAB1Q8N987 351 aa21.24■□□□□ 0.99
MEG3-224ENST00000554639 SPATA31A6Q5VVP1 1343 aa21.24■□□□□ 0.99
MEG3-224ENST00000554639 M0R2C6 588 aa21.24■□□□□ 0.99
MEG3-224ENST00000554639 USP48Q86UV5 1035 aa21.24■□□□□ 0.99
MEG3-224ENST00000554639 KIF3AQ9Y496 699 aa21.24■□□□□ 0.99
MEG3-224ENST00000554639 WDR19Q8NEZ3 1342 aa21.23■□□□□ 0.99
MEG3-224ENST00000554639 CHGBP05060 677 aa21.23■□□□□ 0.99
MEG3-224ENST00000554639 MCAMP43121 646 aa21.23■□□□□ 0.99
MEG3-224ENST00000554639 UBE2HP62256 183 aa21.23■□□□□ 0.99
MEG3-224ENST00000554639 IMMTQ16891 758 aaKnown RBP21.23■□□□□ 0.99
MEG3-224ENST00000554639 WASHC4Q2M389 1173 aa21.23■□□□□ 0.99
MEG3-224ENST00000554639 RC3H1Q5TC82 1133 aaKnown RBP21.23■□□□□ 0.99
MEG3-224ENST00000554639 MPHOSPH8Q99549 860 aa21.23■□□□□ 0.99
MEG3-224ENST00000554639 NIP7Q9Y221 180 aaKnown RBP eCLIP21.23■□□□□ 0.99
MEG3-224ENST00000554639 E7EWF7 191 aa21.22■□□□□ 0.99
MEG3-224ENST00000554639 PFKFB2O60825 505 aa21.22■□□□□ 0.99
MEG3-224ENST00000554639 LETM1O95202 739 aaPredicted RBP21.22■□□□□ 0.99
MEG3-224ENST00000554639 ADD2P35612 726 aa21.22■□□□□ 0.99
MEG3-224ENST00000554639 SCARF1Q14162 830 aa21.22■□□□□ 0.99
MEG3-224ENST00000554639 LRSAM1Q6UWE0 723 aa21.22■□□□□ 0.99
MEG3-224ENST00000554639 NGLY1Q96IV0 654 aa21.22■□□□□ 0.99
MEG3-224ENST00000554639 IGHMBP2P38935 993 aaKnown RBP21.21■□□□□ 0.99
MEG3-224ENST00000554639 FGD1P98174 961 aa21.21■□□□□ 0.99
MEG3-224ENST00000554639 CCDC102BQ68D86 513 aa21.21■□□□□ 0.99
MEG3-224ENST00000554639 STOX1Q6ZVD7 989 aa21.21■□□□□ 0.99
MEG3-224ENST00000554639 ANP32BQ92688 251 aaKnown RBP21.21■□□□□ 0.99
MEG3-224ENST00000554639 ZNF274Q96GC6 653 aaPredicted RBP21.21■□□□□ 0.99
MEG3-224ENST00000554639 A0A0G2JS52 829 aa21.21■□□□□ 0.99
MEG3-224ENST00000554639 EVCP57679 992 aa21.21■□□□□ 0.99
MEG3-224ENST00000554639 CDC5LQ99459 802 aaKnown RBP21.21■□□□□ 0.99
MEG3-224ENST00000554639 TMEM63CQ9P1W3 806 aa21.21■□□□□ 0.99
MEG3-224ENST00000554639 THSD7AQ9UPZ6 1657 aa21.2■□□□□ 0.98
MEG3-224ENST00000554639 UBAP1LF5GYI3 381 aa21.2■□□□□ 0.98
MEG3-224ENST00000554639 HMGN5P82970 282 aaKnown RBP21.2■□□□□ 0.98
MEG3-224ENST00000554639 FAM98CQ17RN3 349 aaKnown RBP21.2■□□□□ 0.98
MEG3-224ENST00000554639 SCN7AQ01118 1682 aa21.19■□□□□ 0.98
MEG3-224ENST00000554639 SMARCC2Q8TAQ2 1214 aa21.19■□□□□ 0.98
MEG3-224ENST00000554639 TCEANC2Q96MN5 208 aa21.19■□□□□ 0.98
MEG3-224ENST00000554639 ELP1O95163 1332 aa21.19■□□□□ 0.98
MEG3-224ENST00000554639 ZMYM6O95789 1325 aa21.19■□□□□ 0.98
MEG3-224ENST00000554639 HCLS1P14317 486 aaPredicted RBP21.18■□□□□ 0.98
MEG3-224ENST00000554639 BRF1Q92994 677 aa21.18■□□□□ 0.98
MEG3-224ENST00000554639 NHSQ6T4R5 1651 aa21.18■□□□□ 0.98
MEG3-224ENST00000554639 DOCK2Q92608 1830 aa21.18■□□□□ 0.98
MEG3-224ENST00000554639 VPS37CA5D8V6 355 aaPredicted RBP21.18■□□□□ 0.98
MEG3-224ENST00000554639 GPAA1O43292 621 aa21.18■□□□□ 0.98
MEG3-224ENST00000554639 KCNQ2O43526 872 aa21.18■□□□□ 0.98
MEG3-224ENST00000554639 NASPP49321 788 aaPredicted RBP21.18■□□□□ 0.98
MEG3-224ENST00000554639 KRT85P78386 507 aa21.18■□□□□ 0.98
MEG3-224ENST00000554639 COL9A3Q14050 684 aaPredicted RBP21.18■□□□□ 0.98
MEG3-224ENST00000554639 SF3B3Q15393 1217 aaKnown RBP21.18■□□□□ 0.98
MEG3-224ENST00000554639 CNPY2Q9Y2B0 182 aa21.18■□□□□ 0.98
MEG3-224ENST00000554639 TCHHQ07283 1943 aa21.17■□□□□ 0.98
MEG3-224ENST00000554639 CCDC173Q0VFZ6 552 aa21.17■□□□□ 0.98
MEG3-224ENST00000554639 CHAMP1Q96JM3 812 aa21.17■□□□□ 0.98
MEG3-224ENST00000554639 C8orf37Q96NL8 207 aa21.17■□□□□ 0.98
MEG3-224ENST00000554639 PANK2Q9BZ23 570 aa21.17■□□□□ 0.98
MEG3-224ENST00000554639 FGAP02671 866 aa21.16■□□□□ 0.98
MEG3-224ENST00000554639 PHKA1P46020 1223 aa21.16■□□□□ 0.98
MEG3-224ENST00000554639 ALX1Q15699 326 aa21.16■□□□□ 0.98
MEG3-224ENST00000554639 SLFNL1Q499Z3 407 aa21.16■□□□□ 0.98
MEG3-224ENST00000554639 SLC10A5Q5PT55 438 aa21.16■□□□□ 0.98
MEG3-224ENST00000554639 SLC9C2Q5TAH2 1124 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms