RNA–Protein interactions for RNA: ENST00000554621.1

CFAP54-206, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 3

Gene CFAP54, Length 724 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-206ENST00000554621 GCC1Q96CN9 775 aa18.71■□□□□ 0.59
CFAP54-206ENST00000554621 COA1Q9GZY4 146 aa18.71■□□□□ 0.59
CFAP54-206ENST00000554621 BSDC1Q9NW68 430 aaPredicted RBP18.71■□□□□ 0.59
CFAP54-206ENST00000554621 MED23Q9ULK4 1368 aa18.7■□□□□ 0.58
CFAP54-206ENST00000554621 GPR25O00155 361 aa18.7■□□□□ 0.58
CFAP54-206ENST00000554621 FKTNO75072 461 aa18.7■□□□□ 0.58
CFAP54-206ENST00000554621 IGHMBP2P38935 993 aaKnown RBP18.7■□□□□ 0.58
CFAP54-206ENST00000554621 CTSWP56202 376 aa18.7■□□□□ 0.58
CFAP54-206ENST00000554621 NBPF9Q3BBW0 867 aa18.7■□□□□ 0.58
CFAP54-206ENST00000554621 STRIP1Q5VSL9 837 aa18.7■□□□□ 0.58
CFAP54-206ENST00000554621 FBXO46Q6PJ61 603 aaPredicted RBP18.7■□□□□ 0.58
CFAP54-206ENST00000554621 ADAMTS8Q9UP79 889 aa18.7■□□□□ 0.58
CFAP54-206ENST00000554621 CCT4P50991 539 aaKnown RBP18.69■□□□□ 0.58
CFAP54-206ENST00000554621 MOB2Q70IA6 237 aa18.69■□□□□ 0.58
CFAP54-206ENST00000554621 JARID2Q92833 1246 aaPredicted RBP18.69■□□□□ 0.58
CFAP54-206ENST00000554621 STK31Q9BXU1 1019 aa18.69■□□□□ 0.58
CFAP54-206ENST00000554621 LEMD3Q9Y2U8 911 aa18.69■□□□□ 0.58
CFAP54-206ENST00000554621 SCN9AQ15858 1988 aa18.68■□□□□ 0.58
CFAP54-206ENST00000554621 WNT10BO00744 389 aa18.68■□□□□ 0.58
CFAP54-206ENST00000554621 KCNJ4P48050 445 aa18.68■□□□□ 0.58
CFAP54-206ENST00000554621 INHBEP58166 350 aa18.68■□□□□ 0.58
CFAP54-206ENST00000554621 MKRN3Q13064 507 aaKnown RBP18.68■□□□□ 0.58
CFAP54-206ENST00000554621 PRAMEF18Q5VWM3 479 aa18.68■□□□□ 0.58
CFAP54-206ENST00000554621 ANKRD2Q9GZV1 360 aa18.68■□□□□ 0.58
CFAP54-206ENST00000554621 MINPP1Q9UNW1 487 aa18.68■□□□□ 0.58
CFAP54-206ENST00000554621 MAP3K2Q9Y2U5 619 aa18.68■□□□□ 0.58
CFAP54-206ENST00000554621 DACT2Q5SW24 774 aa18.67■□□□□ 0.58
CFAP54-206ENST00000554621 TTLL5Q6EMB2 1281 aa18.67■□□□□ 0.58
CFAP54-206ENST00000554621 MPHOSPH8Q99549 860 aa18.67■□□□□ 0.58
CFAP54-206ENST00000554621 SCAF8Q9UPN6 1271 aaKnown RBP18.67■□□□□ 0.58
CFAP54-206ENST00000554621 PRKG1Q13976 671 aa18.66■□□□□ 0.58
CFAP54-206ENST00000554621 KSR2Q6VAB6 950 aa18.66■□□□□ 0.58
CFAP54-206ENST00000554621 PDE4DIPQ5VU43 2346 aa18.65■□□□□ 0.58
CFAP54-206ENST00000554621 MANSC4A6NHS7 340 aaPredicted RBP18.65■□□□□ 0.58
CFAP54-206ENST00000554621 MYO1BO43795 1136 aa18.65■□□□□ 0.58
CFAP54-206ENST00000554621 PPP1R12BO60237 982 aaPredicted RBP18.65■□□□□ 0.58
CFAP54-206ENST00000554621 ZNF853P0CG23 659 aa18.65■□□□□ 0.58
CFAP54-206ENST00000554621 DDX10Q13206 875 aaKnown RBP18.65■□□□□ 0.58
CFAP54-206ENST00000554621 OTUD7BQ6GQQ9 843 aa18.65■□□□□ 0.58
CFAP54-206ENST00000554621 TTLL11Q8NHH1 800 aa18.65■□□□□ 0.58
CFAP54-206ENST00000554621 SLC10A4Q96EP9 437 aa18.65■□□□□ 0.58
CFAP54-206ENST00000554621 ANGEL1Q9UNK9 670 aaKnown RBP18.65■□□□□ 0.58
CFAP54-206ENST00000554621 COL4A1P02462 1669 aa18.65■□□□□ 0.58
CFAP54-206ENST00000554621 PSME4Q14997 1843 aa18.65■□□□□ 0.58
CFAP54-206ENST00000554621 SASH1O94885 1247 aa18.64■□□□□ 0.57
CFAP54-206ENST00000554621 INTS3Q68E01 1043 aaKnown RBP18.64■□□□□ 0.57
CFAP54-206ENST00000554621 CFHR5Q9BXR6 569 aa18.64■□□□□ 0.57
CFAP54-206ENST00000554621 GREM2Q9H772 168 aa18.64■□□□□ 0.57
CFAP54-206ENST00000554621 PI4KAP2A4QPH2 592 aa18.63■□□□□ 0.57
CFAP54-206ENST00000554621 APAF1O14727 1248 aa18.63■□□□□ 0.57
CFAP54-206ENST00000554621 TNRC18O15417 2968 aaPredicted RBP18.63■□□□□ 0.57
CFAP54-206ENST00000554621 PTPN12Q05209 780 aaKnown RBP18.63■□□□□ 0.57
CFAP54-206ENST00000554621 DLGAP5Q15398 846 aa18.63■□□□□ 0.57
CFAP54-206ENST00000554621 KIAA0825Q8IV33 1275 aa18.63■□□□□ 0.57
CFAP54-206ENST00000554621 PI4KAP1Q8N8J0 262 aa18.63■□□□□ 0.57
CFAP54-206ENST00000554621 ZNF804BA4D1E1 1349 aa18.63■□□□□ 0.57
CFAP54-206ENST00000554621 SUPT20HL1Q3ZLR7 823 aa18.62■□□□□ 0.57
CFAP54-206ENST00000554621 SPRYD7Q5W111 196 aa18.62■□□□□ 0.57
CFAP54-206ENST00000554621 MXD3Q9BW11 206 aa18.62■□□□□ 0.57
CFAP54-206ENST00000554621 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.62■□□□□ 0.57
CFAP54-206ENST00000554621 PPP2R3BQ9Y5P8 575 aa18.62■□□□□ 0.57
CFAP54-206ENST00000554621 COL1A1P02452 1464 aaPredicted RBP18.61■□□□□ 0.57
CFAP54-206ENST00000554621 ZBTB48P10074 688 aaPredicted RBP18.61■□□□□ 0.57
CFAP54-206ENST00000554621 GTF2IP78347 998 aa18.61■□□□□ 0.57
CFAP54-206ENST00000554621 C8orf58Q8NAV2 365 aa18.61■□□□□ 0.57
CFAP54-206ENST00000554621 MYH16Q9H6N6 1097 aa18.61■□□□□ 0.57
CFAP54-206ENST00000554621 UNCXA6NJT0 531 aa18.6■□□□□ 0.57
CFAP54-206ENST00000554621 UBE3BQ7Z3V4 1068 aa18.6■□□□□ 0.57
CFAP54-206ENST00000554621 ERO1AQ96HE7 468 aa18.6■□□□□ 0.57
CFAP54-206ENST00000554621 DEFB129Q9H1M3 183 aa18.6■□□□□ 0.57
CFAP54-206ENST00000554621 TRIM17Q9Y577 477 aa18.6■□□□□ 0.57
CFAP54-206ENST00000554621 ITGA6P23229 1130 aa18.59■□□□□ 0.57
CFAP54-206ENST00000554621 ARHGEF6Q15052 776 aa18.59■□□□□ 0.57
CFAP54-206ENST00000554621 LDLRAD1Q5T700 205 aa18.59■□□□□ 0.57
CFAP54-206ENST00000554621 NEURL1BA8MQ27 555 aa18.58■□□□□ 0.56
CFAP54-206ENST00000554621 IGKV5-2P06315 115 aa18.58■□□□□ 0.56
CFAP54-206ENST00000554621 IREB2P48200 963 aaKnown RBP18.58■□□□□ 0.56
CFAP54-206ENST00000554621 IFNL1Q8IU54 200 aa18.58■□□□□ 0.56
CFAP54-206ENST00000554621 ANKRD18BA2A2Z9 1011 aa18.57■□□□□ 0.56
CFAP54-206ENST00000554621 CWF19L2Q2TBE0 894 aaKnown RBP18.57■□□□□ 0.56
CFAP54-206ENST00000554621 ZNF804AQ7Z570 1209 aa18.57■□□□□ 0.56
CFAP54-206ENST00000554621 WTIPA6NIX2 430 aaPredicted RBP18.56■□□□□ 0.56
CFAP54-206ENST00000554621 H7C1W4 665 aa18.56■□□□□ 0.56
CFAP54-206ENST00000554621 RBM5P52756 815 aaKnown RBP eCLIP18.56■□□□□ 0.56
CFAP54-206ENST00000554621 TXNRD3Q86VQ6 643 aa18.56■□□□□ 0.56
CFAP54-206ENST00000554621 CD209Q9NNX6 404 aa18.56■□□□□ 0.56
CFAP54-206ENST00000554621 WDHD1O75717 1129 aaPredicted RBP18.55■□□□□ 0.56
CFAP54-206ENST00000554621 SLC4A2P04920 1241 aa18.55■□□□□ 0.56
CFAP54-206ENST00000554621 CHRNDQ07001 517 aa18.55■□□□□ 0.56
CFAP54-206ENST00000554621 MAP3K11Q16584 847 aa18.55■□□□□ 0.56
CFAP54-206ENST00000554621 MTMR14Q8NCE2 650 aa18.55■□□□□ 0.56
CFAP54-206ENST00000554621 WNK4Q96J92 1243 aa18.55■□□□□ 0.56
CFAP54-206ENST00000554621 PLA2G12BQ9BX93 195 aa18.55■□□□□ 0.56
CFAP54-206ENST00000554621 VEZTQ9HBM0 779 aa18.55■□□□□ 0.56
CFAP54-206ENST00000554621 MYH3P11055 1940 aa18.55■□□□□ 0.56
CFAP54-206ENST00000554621 IFIT5Q13325 482 aaKnown RBP18.54■□□□□ 0.56
CFAP54-206ENST00000554621 TNFAIP1Q13829 316 aa18.54■□□□□ 0.56
CFAP54-206ENST00000554621 GCKRQ14397 625 aa18.54■□□□□ 0.56
CFAP54-206ENST00000554621 OTOP1Q7RTM1 612 aa18.54■□□□□ 0.56
CFAP54-206ENST00000554621 TMEM106CQ9BVX2 250 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms