RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 CCT4P50991 539 aaKnown RBP28.47■■■□□ 2.15
GABRB3-206ENST00000554556 PITPNM2Q9BZ72 1349 aa28.46■■■□□ 2.15
GABRB3-206ENST00000554556 MYH16Q9H6N6 1097 aa28.46■■■□□ 2.15
GABRB3-206ENST00000554556 LEMD3Q9Y2U8 911 aa28.46■■■□□ 2.15
GABRB3-206ENST00000554556 KIF23Q02241 960 aaPredicted RBP28.45■■■□□ 2.14
GABRB3-206ENST00000554556 GCKRQ14397 625 aa28.45■■■□□ 2.14
GABRB3-206ENST00000554556 PLA2G12BQ9BX93 195 aa28.45■■■□□ 2.14
GABRB3-206ENST00000554556 COA1Q9GZY4 146 aa28.45■■■□□ 2.14
GABRB3-206ENST00000554556 AKAP11Q9UKA4 1901 aa28.44■■■□□ 2.14
GABRB3-206ENST00000554556 FKBP1BP68106 108 aa28.44■■■□□ 2.14
GABRB3-206ENST00000554556 FLIIQ13045 1269 aa28.44■■■□□ 2.14
GABRB3-206ENST00000554556 OGFOD1Q8N543 542 aa28.44■■■□□ 2.14
GABRB3-206ENST00000554556 ANKRD2Q9GZV1 360 aa28.44■■■□□ 2.14
GABRB3-206ENST00000554556 SAGE1Q9NXZ1 904 aa28.44■■■□□ 2.14
GABRB3-206ENST00000554556 MYO3BQ8WXR4 1341 aa28.43■■■□□ 2.14
GABRB3-206ENST00000554556 FKBP5Q13451 457 aaPredicted RBP28.43■■■□□ 2.14
GABRB3-206ENST00000554556 MPHOSPH8Q99549 860 aa28.43■■■□□ 2.14
GABRB3-206ENST00000554556 MCOLN1Q9GZU1 580 aa28.43■■■□□ 2.14
GABRB3-206ENST00000554556 WTIPA6NIX2 430 aaPredicted RBP28.42■■■□□ 2.14
GABRB3-206ENST00000554556 SLC10A3P09131 477 aa28.42■■■□□ 2.14
GABRB3-206ENST00000554556 MMP14P50281 582 aa28.42■■■□□ 2.14
GABRB3-206ENST00000554556 STRIP1Q5VSL9 837 aa28.42■■■□□ 2.14
GABRB3-206ENST00000554556 REM2Q8IYK8 340 aaPredicted RBP28.42■■■□□ 2.14
GABRB3-206ENST00000554556 DNAAF4Q8WXU2 420 aa28.42■■■□□ 2.14
GABRB3-206ENST00000554556 FBXW7Q969H0 707 aa28.42■■■□□ 2.14
GABRB3-206ENST00000554556 ITGA6P23229 1130 aa28.41■■■□□ 2.14
GABRB3-206ENST00000554556 DGKZQ13574 1117 aa28.41■■■□□ 2.14
GABRB3-206ENST00000554556 DACT2Q5SW24 774 aa28.41■■■□□ 2.14
GABRB3-206ENST00000554556 LINS1Q8NG48 757 aa28.41■■■□□ 2.14
GABRB3-206ENST00000554556 MRS2Q9HD23 443 aa28.41■■■□□ 2.14
GABRB3-206ENST00000554556 CSF1RP07333 972 aa28.39■■■□□ 2.14
GABRB3-206ENST00000554556 WDR63Q8IWG1 891 aa28.39■■■□□ 2.14
GABRB3-206ENST00000554556 ZNF804BA4D1E1 1349 aa28.39■■■□□ 2.13
GABRB3-206ENST00000554556 RNF186Q9NXI6 227 aa28.38■■■□□ 2.13
GABRB3-206ENST00000554556 FANCIQ9NVI1 1328 aa28.38■■■□□ 2.13
GABRB3-206ENST00000554556 PAPPA2Q9BXP8 1791 aa28.37■■■□□ 2.13
GABRB3-206ENST00000554556 VAMP4O75379 141 aa28.37■■■□□ 2.13
GABRB3-206ENST00000554556 TRPA1O75762 1119 aa28.37■■■□□ 2.13
GABRB3-206ENST00000554556 KCNJ4P48050 445 aa28.37■■■□□ 2.13
GABRB3-206ENST00000554556 CASP7P55210 303 aa28.37■■■□□ 2.13
GABRB3-206ENST00000554556 FAM161AQ3B820 660 aa28.37■■■□□ 2.13
GABRB3-206ENST00000554556 TTLL5Q6EMB2 1281 aa28.37■■■□□ 2.13
GABRB3-206ENST00000554556 CSRNP1Q96S65 589 aa28.37■■■□□ 2.13
GABRB3-206ENST00000554556 RGS19P49795 217 aa28.36■■■□□ 2.13
GABRB3-206ENST00000554556 NBPF9Q3BBW0 867 aa28.36■■■□□ 2.13
GABRB3-206ENST00000554556 TXNRD3Q86VQ6 643 aa28.36■■■□□ 2.13
GABRB3-206ENST00000554556 MXD3Q9BW11 206 aa28.36■■■□□ 2.13
GABRB3-206ENST00000554556 HDAC9Q9UKV0 1011 aa28.36■■■□□ 2.13
GABRB3-206ENST00000554556 ANKRD18BA2A2Z9 1011 aa28.35■■■□□ 2.13
GABRB3-206ENST00000554556 ANP32CO43423 234 aa28.35■■■□□ 2.13
GABRB3-206ENST00000554556 NF2P35240 595 aa28.35■■■□□ 2.13
GABRB3-206ENST00000554556 MLLT1Q03111 559 aaPredicted RBP28.35■■■□□ 2.13
GABRB3-206ENST00000554556 RASAL3Q86YV0 1011 aa28.35■■■□□ 2.13
GABRB3-206ENST00000554556 SALL2Q9Y467 1007 aaPredicted RBP28.35■■■□□ 2.13
GABRB3-206ENST00000554556 WNT10BO00744 389 aa28.34■■■□□ 2.13
GABRB3-206ENST00000554556 CHRNDQ07001 517 aa28.33■■■□□ 2.13
GABRB3-206ENST00000554556 EXOSC9Q06265 439 aaKnown RBP28.32■■■□□ 2.12
GABRB3-206ENST00000554556 TTLL12Q14166 644 aaPredicted RBP28.32■■■□□ 2.12
GABRB3-206ENST00000554556 SCAF8Q9UPN6 1271 aaKnown RBP28.32■■■□□ 2.12
GABRB3-206ENST00000554556 ZNF646O15015 1829 aaPredicted RBP28.32■■■□□ 2.12
GABRB3-206ENST00000554556 GTF2IP78347 998 aa28.31■■■□□ 2.12
GABRB3-206ENST00000554556 IFIT5Q13325 482 aaKnown RBP28.31■■■□□ 2.12
GABRB3-206ENST00000554556 UBE2Q2LH0YL09 131 aa28.3■■■□□ 2.12
GABRB3-206ENST00000554556 PRAMEF18Q5VWM3 479 aa28.3■■■□□ 2.12
GABRB3-206ENST00000554556 CD209Q9NNX6 404 aa28.3■■■□□ 2.12
GABRB3-206ENST00000554556 KLRK1P26718 216 aa28.29■■■□□ 2.12
GABRB3-206ENST00000554556 MOB2Q70IA6 237 aa28.29■■■□□ 2.12
GABRB3-206ENST00000554556 APOBEC3FQ8IUX4 373 aaKnown RBP28.29■■■□□ 2.12
GABRB3-206ENST00000554556 KIAA0825Q8IV33 1275 aa28.29■■■□□ 2.12
GABRB3-206ENST00000554556 CHMP3Q9Y3E7 222 aa28.29■■■□□ 2.12
GABRB3-206ENST00000554556 SASH1O94885 1247 aa28.27■■■□□ 2.12
GABRB3-206ENST00000554556 FOXO4P98177 505 aa28.27■■■□□ 2.12
GABRB3-206ENST00000554556 BEND3Q5T5X7 828 aa28.27■■■□□ 2.12
GABRB3-206ENST00000554556 C15orf52Q6ZUT6 534 aaKnown RBP28.27■■■□□ 2.12
GABRB3-206ENST00000554556 F6X3S4 739 aa28.26■■■□□ 2.11
GABRB3-206ENST00000554556 ZEB1P37275 1124 aaPredicted RBP28.26■■■□□ 2.11
GABRB3-206ENST00000554556 ARMC9Q7Z3E5 817 aa28.26■■■□□ 2.11
GABRB3-206ENST00000554556 TAF5LO75529 589 aa28.24■■■□□ 2.11
GABRB3-206ENST00000554556 DLGAP5Q15398 846 aa28.24■■■□□ 2.11
GABRB3-206ENST00000554556 CCDC57Q2TAC2 916 aa28.24■■■□□ 2.11
GABRB3-206ENST00000554556 TAF7LQ5H9L4 462 aa28.24■■■□□ 2.11
GABRB3-206ENST00000554556 ZNF804AQ7Z570 1209 aa28.24■■■□□ 2.11
GABRB3-206ENST00000554556 HELBQ8NG08 1087 aaPredicted RBP28.24■■■□□ 2.11
GABRB3-206ENST00000554556 LMBR1LQ6UX01 489 aa28.23■■■□□ 2.11
GABRB3-206ENST00000554556 CTU1Q7Z7A3 348 aaKnown RBP28.23■■■□□ 2.11
GABRB3-206ENST00000554556 ZBED3Q96IU2 234 aaPredicted RBP28.23■■■□□ 2.11
GABRB3-206ENST00000554556 GRM8O00222 908 aa28.22■■■□□ 2.11
GABRB3-206ENST00000554556 SNAP23O00161 211 aa28.21■■■□□ 2.11
GABRB3-206ENST00000554556 TM4SF4P48230 202 aa28.21■■■□□ 2.11
GABRB3-206ENST00000554556 LDHAL6AQ6ZMR3 332 aa28.21■■■□□ 2.11
GABRB3-206ENST00000554556 C9orf78Q9NZ63 289 aaPredicted RBP28.21■■■□□ 2.11
GABRB3-206ENST00000554556 IRS2Q9Y4H2 1338 aa28.2■■■□□ 2.11
GABRB3-206ENST00000554556 IL1R1P14778 569 aa28.2■■■□□ 2.1
GABRB3-206ENST00000554556 FKBP1AP62942 108 aaKnown RBP28.2■■■□□ 2.1
GABRB3-206ENST00000554556 MTMR14Q8NCE2 650 aa28.2■■■□□ 2.1
GABRB3-206ENST00000554556 CNNM1Q9NRU3 951 aa28.2■■■□□ 2.1
GABRB3-206ENST00000554556 ZNF316A6NFI3 1004 aaPredicted RBP28.19■■■□□ 2.1
GABRB3-206ENST00000554556 MYO1BO43795 1136 aa28.19■■■□□ 2.1
GABRB3-206ENST00000554556 ALDH1L1O75891 902 aa28.19■■■□□ 2.1
GABRB3-206ENST00000554556 SREBF2Q12772 1141 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms