RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 MCTP1Q6DN14 999 aa3.15□□□□□ -1.9
PRPF39-207ENST00000554439 CAVIN1Q6NZI2 390 aaKnown RBP3.15□□□□□ -1.9
PRPF39-207ENST00000554439 HELQQ8TDG4 1101 aa3.15□□□□□ -1.9
PRPF39-207ENST00000554439 PLEKHF1Q96S99 279 aa3.15□□□□□ -1.9
PRPF39-207ENST00000554439 C1QTNF2Q9BXJ5 285 aa3.15□□□□□ -1.9
PRPF39-207ENST00000554439 FAM13BQ9NYF5 915 aa3.15□□□□□ -1.9
PRPF39-207ENST00000554439 R3HCC1Q9Y3T6 440 aaKnown RBP3.15□□□□□ -1.9
PRPF39-207ENST00000554439 DDX49Q9Y6V7 483 aaKnown RBP3.15□□□□□ -1.9
PRPF39-207ENST00000554439 MAP3K4Q9Y6R4 1608 aa3.15□□□□□ -1.9
PRPF39-207ENST00000554439 SHROOM2Q13796 1616 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 ERCC6L2Q5T890 1561 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 ELL2O00472 640 aaPredicted RBP3.15□□□□□ -1.91
PRPF39-207ENST00000554439 BAG4O95429 457 aaKnown RBP3.15□□□□□ -1.91
PRPF39-207ENST00000554439 EPHA4P54764 986 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 HDLBPQ00341 1268 aaKnown RBP3.15□□□□□ -1.91
PRPF39-207ENST00000554439 XPCQ01831 940 aaPredicted RBP3.15□□□□□ -1.91
PRPF39-207ENST00000554439 FMR1Q06787 632 aaKnown RBP eCLIP3.15□□□□□ -1.91
PRPF39-207ENST00000554439 CCDC173Q0VFZ6 552 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 ZSCAN30Q86W11 494 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 ZNF511Q8NB15 262 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 CFAP53Q96M91 514 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 RBCK1Q9BYM8 510 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 GGNBP2Q9H3C7 697 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 RNF19AQ9NV58 838 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 ZNF358Q9NW07 568 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 MROH2AA6NES4 1674 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 KANK1Q14678 1352 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 ATAD2Q6PL18 1390 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 TREHO43280 583 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 PPFIA3O75145 1194 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 STAU1O95793 577 aaKnown RBP3.15□□□□□ -1.91
PRPF39-207ENST00000554439 TPM2P07951 284 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 HSP90B1P14625 803 aaKnown RBP3.15□□□□□ -1.91
PRPF39-207ENST00000554439 SCNN1DP51172 638 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 PSME1Q06323 249 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 RAD51AP2Q09MP3 1159 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 EAPPQ56P03 285 aaPredicted RBP3.15□□□□□ -1.91
PRPF39-207ENST00000554439 NAALADL2Q58DX5 795 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 RNF20Q5VTR2 975 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 EFCAB2Q5VUJ9 269 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 BPHLQ86WA6 291 aaPredicted RBP3.15□□□□□ -1.91
PRPF39-207ENST00000554439 SIRT2Q8IXJ6 389 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 JARID2Q92833 1246 aaPredicted RBP3.15□□□□□ -1.91
PRPF39-207ENST00000554439 PPP1R9BQ96SB3 815 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 THUMPD2Q9BTF0 503 aaKnown RBP3.15□□□□□ -1.91
PRPF39-207ENST00000554439 RBSNQ9H1K0 784 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 PDCL3Q9H2J4 239 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 ISY1Q9ULR0 285 aaKnown RBP3.15□□□□□ -1.91
PRPF39-207ENST00000554439 PCDHB11Q9Y5F2 797 aa3.15□□□□□ -1.91
PRPF39-207ENST00000554439 NOS1P29475 1434 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 PPIP5K1Q6PFW1 1433 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 KIAA1210Q9ULL0 1709 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 OFD1O75665 1012 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 GSPT1P15170 499 aaKnown RBP3.14□□□□□ -1.91
PRPF39-207ENST00000554439 MSNP26038 577 aaKnown RBP3.14□□□□□ -1.91
PRPF39-207ENST00000554439 DSC3Q14574 896 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 KLHL40Q2TBA0 621 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 SKOR2Q2VWA4 1001 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-207ENST00000554439 ZSCAN23Q3MJ62 389 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 BMP2KLQ5H9B9 411 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 METTL16Q86W50 562 aaKnown RBP3.14□□□□□ -1.91
PRPF39-207ENST00000554439 ZSCAN29Q8IWY8 852 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-207ENST00000554439 TRMT44Q8IYL2 757 aaKnown RBP3.14□□□□□ -1.91
PRPF39-207ENST00000554439 C16orf71Q8IYS4 520 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-207ENST00000554439 ZGPATQ8N5A5 531 aaKnown RBP3.14□□□□□ -1.91
PRPF39-207ENST00000554439 BEND7Q8N7W2 519 aaPredicted RBP3.14□□□□□ -1.91
PRPF39-207ENST00000554439 TSPYL6Q8N831 410 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 NANOS1Q8WY41 292 aaKnown RBP3.14□□□□□ -1.91
PRPF39-207ENST00000554439 MRGPRX2Q96LB1 330 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 SAP130Q9H0E3 1048 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 NSFL1CQ9UNZ2 370 aaKnown RBP3.14□□□□□ -1.91
PRPF39-207ENST00000554439 PLCH2O75038 1416 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 ABCC1P33527 1531 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 QRICH2Q9H0J4 1663 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 IGFBP4P22692 258 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 MPSTP25325 297 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 WNT7BP56706 349 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 NBPF20Q3BBV1 942 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 LINC01559Q495D7 138 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 SEPT12Q8IYM1 358 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 CCDC24Q8N4L8 307 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 MPNDQ8N594 471 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 GPT2Q8TD30 523 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 LMBRD1Q9NUN5 540 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 ADGRB2O60241 1585 aa3.14□□□□□ -1.91
PRPF39-207ENST00000554439 FOXO3O43524 673 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 PRPF40AO75400 957 aaKnown RBP3.13□□□□□ -1.91
PRPF39-207ENST00000554439 MAP3K10Q02779 954 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 C9orf131Q5VYM1 1079 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 OTUD7AQ8TE49 926 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-207ENST00000554439 SLC10A4Q96EP9 437 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 FAM161BQ96MY7 647 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 CFAP74Q9C0B2 1584 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 PRDM10Q9NQV6 1147 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 KIF1BO60333 1816 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 TET3O43151 1660 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 ZFYVE16Q7Z3T8 1539 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 MYOM2P54296 1465 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 UQCRHLA0A096LP55 91 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 GOLGA6L22H0YM25 854 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms