RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 ZNF468Q5VIY5 522 aaPredicted RBP7.77□□□□□ -1.17
MTHFD1-206ENST00000554353 NCAPG2Q86XI2 1143 aa7.77□□□□□ -1.17
MTHFD1-206ENST00000554353 GALNT12Q8IXK2 581 aa7.77□□□□□ -1.17
MTHFD1-206ENST00000554353 UBE2OQ9C0C9 1292 aaKnown RBP7.77□□□□□ -1.17
MTHFD1-206ENST00000554353 NSFL1CQ9UNZ2 370 aaKnown RBP7.77□□□□□ -1.17
MTHFD1-206ENST00000554353 SPG7Q9UQ90 795 aa7.77□□□□□ -1.17
MTHFD1-206ENST00000554353 KIF13AQ9H1H9 1805 aa7.77□□□□□ -1.17
MTHFD1-206ENST00000554353 GNA15P30679 374 aa7.76□□□□□ -1.17
MTHFD1-206ENST00000554353 DAB2P98082 770 aa7.76□□□□□ -1.17
MTHFD1-206ENST00000554353 COL13A1Q5TAT6 717 aaPredicted RBP7.76□□□□□ -1.17
MTHFD1-206ENST00000554353 HFE2Q6ZVN8 426 aa7.76□□□□□ -1.17
MTHFD1-206ENST00000554353 TMC4Q7Z404 712 aa7.76□□□□□ -1.17
MTHFD1-206ENST00000554353 COL25A1Q9BXS0 654 aaPredicted RBP7.76□□□□□ -1.17
MTHFD1-206ENST00000554353 LATS2Q9NRM7 1088 aa7.76□□□□□ -1.17
MTHFD1-206ENST00000554353 MBIPQ9NS73 344 aa7.76□□□□□ -1.17
MTHFD1-206ENST00000554353 VTI1BQ9UEU0 232 aa7.76□□□□□ -1.17
MTHFD1-206ENST00000554353 PRG4Q92954 1404 aaPredicted RBP7.76□□□□□ -1.17
MTHFD1-206ENST00000554353 SORBS3O60504 671 aa7.75□□□□□ -1.17
MTHFD1-206ENST00000554353 EDN3P14138 238 aa7.75□□□□□ -1.17
MTHFD1-206ENST00000554353 SOX18P35713 384 aa7.75□□□□□ -1.17
MTHFD1-206ENST00000554353 TSNAXIP1Q2TAA8 658 aa7.75□□□□□ -1.17
MTHFD1-206ENST00000554353 PCGF6Q9BYE7 350 aa7.75□□□□□ -1.17
MTHFD1-206ENST00000554353 DNAJB12Q9NXW2 375 aaKnown RBP7.75□□□□□ -1.17
MTHFD1-206ENST00000554353 SALL4Q9UJQ4 1053 aa7.75□□□□□ -1.17
MTHFD1-206ENST00000554353 RUSC2Q8N2Y8 1516 aa7.74□□□□□ -1.17
MTHFD1-206ENST00000554353 ZBTB42B2RXF5 422 aa7.74□□□□□ -1.17
MTHFD1-206ENST00000554353 J3QW42 95 aa7.74□□□□□ -1.17
MTHFD1-206ENST00000554353 NRLP54845 237 aa7.74□□□□□ -1.17
MTHFD1-206ENST00000554353 RNFT1Q5M7Z0 435 aa7.74□□□□□ -1.17
MTHFD1-206ENST00000554353 SPACA7Q96KW9 195 aa7.74□□□□□ -1.17
MTHFD1-206ENST00000554353 LOC102724428A0A0B4J2F2 783 aa7.73□□□□□ -1.17
MTHFD1-206ENST00000554353 NEURL1BA8MQ27 555 aa7.73□□□□□ -1.17
MTHFD1-206ENST00000554353 SIN3BO75182 1162 aa7.73□□□□□ -1.17
MTHFD1-206ENST00000554353 ARAFP10398 606 aa7.73□□□□□ -1.17
MTHFD1-206ENST00000554353 ACPPP15309 386 aa7.73□□□□□ -1.17
MTHFD1-206ENST00000554353 ADH6P28332 368 aa7.73□□□□□ -1.17
MTHFD1-206ENST00000554353 ITGAEP38570 1179 aa7.73□□□□□ -1.17
MTHFD1-206ENST00000554353 MAP2K3P46734 347 aa7.73□□□□□ -1.17
MTHFD1-206ENST00000554353 SIK1P57059 783 aa7.73□□□□□ -1.17
MTHFD1-206ENST00000554353 KRT76Q01546 638 aa7.73□□□□□ -1.17
MTHFD1-206ENST00000554353 TRPM4Q8TD43 1214 aa7.73□□□□□ -1.17
MTHFD1-206ENST00000554353 FRMD6Q96NE9 622 aa7.73□□□□□ -1.17
MTHFD1-206ENST00000554353 EHD4Q9H223 541 aa7.73□□□□□ -1.17
MTHFD1-206ENST00000554353 IGF1RP08069 1367 aa7.72□□□□□ -1.17
MTHFD1-206ENST00000554353 A0A1W2PP55 124 aa7.72□□□□□ -1.17
MTHFD1-206ENST00000554353 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.72□□□□□ -1.17
MTHFD1-206ENST00000554353 TRPA1O75762 1119 aa7.72□□□□□ -1.17
MTHFD1-206ENST00000554353 KIF4AO95239 1232 aa7.72□□□□□ -1.17
MTHFD1-206ENST00000554353 GHRHP01286 108 aa7.72□□□□□ -1.17
MTHFD1-206ENST00000554353 EIF2AK2P19525 551 aaKnown RBP7.72□□□□□ -1.17
MTHFD1-206ENST00000554353 EIF4BP23588 611 aaKnown RBP7.72□□□□□ -1.17
MTHFD1-206ENST00000554353 GPLD1P80108 840 aa7.72□□□□□ -1.17
MTHFD1-206ENST00000554353 MRPL58Q14197 206 aaKnown RBP7.72□□□□□ -1.17
MTHFD1-206ENST00000554353 PCSK7Q16549 785 aa7.72□□□□□ -1.17
MTHFD1-206ENST00000554353 PEAR1Q5VY43 1037 aaPredicted RBP7.72□□□□□ -1.17
MTHFD1-206ENST00000554353 NXPE4Q6UWF7 544 aa7.72□□□□□ -1.17
MTHFD1-206ENST00000554353 FAM9AQ8IZU1 332 aaPredicted RBP7.72□□□□□ -1.17
MTHFD1-206ENST00000554353 OSMRQ99650 979 aa7.72□□□□□ -1.17
MTHFD1-206ENST00000554353 BCO2Q9BYV7 579 aa7.72□□□□□ -1.17
MTHFD1-206ENST00000554353 OSBPL7Q9BZF2 842 aa7.72□□□□□ -1.17
MTHFD1-206ENST00000554353 AVENQ9NQS1 362 aaPredicted RBP7.72□□□□□ -1.17
MTHFD1-206ENST00000554353 KLF15Q9UIH9 416 aa7.72□□□□□ -1.17
MTHFD1-206ENST00000554353 AK5Q9Y6K8 562 aa7.72□□□□□ -1.17
MTHFD1-206ENST00000554353 HOXD8P13378 290 aaPredicted RBP7.71□□□□□ -1.18
MTHFD1-206ENST00000554353 CPB1P15086 417 aa7.71□□□□□ -1.18
MTHFD1-206ENST00000554353 VAMP1P23763 118 aa7.71□□□□□ -1.18
MTHFD1-206ENST00000554353 GRM2Q14416 872 aa7.71□□□□□ -1.18
MTHFD1-206ENST00000554353 FAM35AQ86V20 835 aa7.71□□□□□ -1.18
MTHFD1-206ENST00000554353 CNTNAP3BQ96NU0 1288 aa7.71□□□□□ -1.18
MTHFD1-206ENST00000554353 ZKSCAN3Q9BRR0 538 aa7.71□□□□□ -1.18
MTHFD1-206ENST00000554353 BACH2Q9BYV9 841 aa7.71□□□□□ -1.18
MTHFD1-206ENST00000554353 CNTNAP3Q9BZ76 1288 aa7.71□□□□□ -1.18
MTHFD1-206ENST00000554353 SUV39H2Q9H5I1 410 aa7.71□□□□□ -1.18
MTHFD1-206ENST00000554353 C12orf49Q9H741 205 aa7.71□□□□□ -1.18
MTHFD1-206ENST00000554353 GGA1Q9UJY5 639 aa7.71□□□□□ -1.18
MTHFD1-206ENST00000554353 SLC6A14Q9UN76 642 aa7.71□□□□□ -1.18
MTHFD1-206ENST00000554353 KIF27Q86VH2 1401 aa7.7□□□□□ -1.18
MTHFD1-206ENST00000554353 CUL7Q14999 1698 aa7.7□□□□□ -1.18
MTHFD1-206ENST00000554353 GIPC1O14908 333 aa7.7□□□□□ -1.18
MTHFD1-206ENST00000554353 RECKO95980 971 aa7.7□□□□□ -1.18
MTHFD1-206ENST00000554353 HMGB1P09429 215 aaKnown RBP7.7□□□□□ -1.18
MTHFD1-206ENST00000554353 ADH7P40394 386 aa7.7□□□□□ -1.18
MTHFD1-206ENST00000554353 ATP11AP98196 1134 aa7.7□□□□□ -1.18
MTHFD1-206ENST00000554353 KIAA0319Q5VV43 1072 aa7.7□□□□□ -1.18
MTHFD1-206ENST00000554353 CEP120Q8N960 986 aa7.7□□□□□ -1.18
MTHFD1-206ENST00000554353 TNFRSF25Q93038 417 aa7.7□□□□□ -1.18
MTHFD1-206ENST00000554353 OXCT2Q9BYC2 517 aaPredicted RBP7.7□□□□□ -1.18
MTHFD1-206ENST00000554353 RBSNQ9H1K0 784 aa7.7□□□□□ -1.18
MTHFD1-206ENST00000554353 LIN7BQ9HAP6 207 aa7.7□□□□□ -1.18
MTHFD1-206ENST00000554353 PPP4R2Q9NY27 417 aa7.7□□□□□ -1.18
MTHFD1-206ENST00000554353 TSPOAP1O95153 1857 aa7.69□□□□□ -1.18
MTHFD1-206ENST00000554353 KCNMA1Q12791 1236 aa7.69□□□□□ -1.18
MTHFD1-206ENST00000554353 FCHSD1Q86WN1 690 aa7.69□□□□□ -1.18
MTHFD1-206ENST00000554353 MICALL1Q8N3F8 863 aa7.69□□□□□ -1.18
MTHFD1-206ENST00000554353 TMEM87AQ8NBN3 555 aa7.69□□□□□ -1.18
MTHFD1-206ENST00000554353 KRTAP9-2Q9BYQ4 174 aa7.69□□□□□ -1.18
MTHFD1-206ENST00000554353 RASSF4Q9H2L5 321 aa7.69□□□□□ -1.18
MTHFD1-206ENST00000554353 TRAK1Q9UPV9 953 aa7.69□□□□□ -1.18
MTHFD1-206ENST00000554353 ADCY10Q96PN6 1610 aa7.69□□□□□ -1.18
MTHFD1-206ENST00000554353 KIAA0586Q9BVV6 1533 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms