RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 CASP7P55210 303 aa23.9■■□□□ 1.42
CPSF2-203ENST00000554290 NOGQ13253 232 aa23.9■■□□□ 1.42
CPSF2-203ENST00000554290 SCN9AQ15858 1988 aa23.9■■□□□ 1.42
CPSF2-203ENST00000554290 WTIPA6NIX2 430 aaPredicted RBP23.89■■□□□ 1.41
CPSF2-203ENST00000554290 BRPF1P55201 1214 aaPredicted RBP23.89■■□□□ 1.41
CPSF2-203ENST00000554290 SCARF1Q14162 830 aa23.89■■□□□ 1.41
CPSF2-203ENST00000554290 FAM9BQ8IZU0 186 aa23.89■■□□□ 1.41
CPSF2-203ENST00000554290 COA1Q9GZY4 146 aa23.89■■□□□ 1.41
CPSF2-203ENST00000554290 MYH3P11055 1940 aa23.88■■□□□ 1.41
CPSF2-203ENST00000554290 FAM161AQ3B820 660 aa23.88■■□□□ 1.41
CPSF2-203ENST00000554290 MYOZ2Q9NPC6 264 aa23.88■■□□□ 1.41
CPSF2-203ENST00000554290 ANGEL2Q5VTE6 544 aaKnown RBP23.87■■□□□ 1.41
CPSF2-203ENST00000554290 RGMBQ6NW40 437 aa23.87■■□□□ 1.41
CPSF2-203ENST00000554290 ZNF804BA4D1E1 1349 aa23.86■■□□□ 1.41
CPSF2-203ENST00000554290 ASTN2O75129 1339 aaPredicted RBP23.86■■□□□ 1.41
CPSF2-203ENST00000554290 ANKRD18BA2A2Z9 1011 aa23.86■■□□□ 1.41
CPSF2-203ENST00000554290 OGFOD1Q8N543 542 aa23.86■■□□□ 1.41
CPSF2-203ENST00000554290 CCDC102AQ96A19 550 aa23.86■■□□□ 1.41
CPSF2-203ENST00000554290 SPINK5Q9NQ38 1064 aaPredicted RBP23.86■■□□□ 1.41
CPSF2-203ENST00000554290 MYO3BQ8WXR4 1341 aa23.85■■□□□ 1.41
CPSF2-203ENST00000554290 KCNJ4P48050 445 aa23.85■■□□□ 1.41
CPSF2-203ENST00000554290 DACT2Q5SW24 774 aa23.85■■□□□ 1.41
CPSF2-203ENST00000554290 BEND3Q5T5X7 828 aa23.85■■□□□ 1.41
CPSF2-203ENST00000554290 STRIP1Q5VSL9 837 aa23.85■■□□□ 1.41
CPSF2-203ENST00000554290 FBXW7Q969H0 707 aa23.85■■□□□ 1.41
CPSF2-203ENST00000554290 CDCA5Q96FF9 252 aa23.85■■□□□ 1.41
CPSF2-203ENST00000554290 CACNA1FO60840 1977 aa23.84■■□□□ 1.41
CPSF2-203ENST00000554290 F6X3S4 739 aa23.84■■□□□ 1.41
CPSF2-203ENST00000554290 PITPNM2Q9BZ72 1349 aa23.84■■□□□ 1.41
CPSF2-203ENST00000554290 MMP14P50281 582 aa23.83■■□□□ 1.41
CPSF2-203ENST00000554290 ZNF157P51786 506 aaPredicted RBP23.83■■□□□ 1.41
CPSF2-203ENST00000554290 IFIT5Q13325 482 aaKnown RBP23.83■■□□□ 1.41
CPSF2-203ENST00000554290 TXNRD3Q86VQ6 643 aa23.83■■□□□ 1.41
CPSF2-203ENST00000554290 TSKSQ9UJT2 592 aa23.83■■□□□ 1.41
CPSF2-203ENST00000554290 PSME4Q14997 1843 aa23.82■■□□□ 1.4
CPSF2-203ENST00000554290 FOXO4P98177 505 aa23.82■■□□□ 1.4
CPSF2-203ENST00000554290 CHRNDQ07001 517 aa23.82■■□□□ 1.4
CPSF2-203ENST00000554290 CHMP3Q9Y3E7 222 aa23.82■■□□□ 1.4
CPSF2-203ENST00000554290 SPEF2Q9C093 1822 aa23.82■■□□□ 1.4
CPSF2-203ENST00000554290 TTLL5Q6EMB2 1281 aa23.81■■□□□ 1.4
CPSF2-203ENST00000554290 POLR2AP24928 1970 aaKnown RBP23.81■■□□□ 1.4
CPSF2-203ENST00000554290 FAM155AB1AL88 458 aaPredicted RBP23.8■■□□□ 1.4
CPSF2-203ENST00000554290 FKBP1BP68106 108 aa23.8■■□□□ 1.4
CPSF2-203ENST00000554290 ABHD8Q96I13 439 aa23.8■■□□□ 1.4
CPSF2-203ENST00000554290 ZIC5Q96T25 663 aa23.8■■□□□ 1.4
CPSF2-203ENST00000554290 MXD3Q9BW11 206 aa23.8■■□□□ 1.4
CPSF2-203ENST00000554290 GRM8O00222 908 aa23.79■■□□□ 1.4
CPSF2-203ENST00000554290 LMBR1LQ6UX01 489 aa23.79■■□□□ 1.4
CPSF2-203ENST00000554290 C9orf78Q9NZ63 289 aaPredicted RBP23.79■■□□□ 1.4
CPSF2-203ENST00000554290 ALDH1L1O75891 902 aa23.78■■□□□ 1.4
CPSF2-203ENST00000554290 KLRK1P26718 216 aa23.78■■□□□ 1.4
CPSF2-203ENST00000554290 GTF2IP78347 998 aa23.78■■□□□ 1.4
CPSF2-203ENST00000554290 CCDC57Q2TAC2 916 aa23.78■■□□□ 1.4
CPSF2-203ENST00000554290 NBPF9Q3BBW0 867 aa23.78■■□□□ 1.4
CPSF2-203ENST00000554290 HDAC9Q9UKV0 1011 aa23.78■■□□□ 1.4
CPSF2-203ENST00000554290 WNT10BO00744 389 aa23.77■■□□□ 1.4
CPSF2-203ENST00000554290 KIF23Q02241 960 aaPredicted RBP23.77■■□□□ 1.4
CPSF2-203ENST00000554290 TAF7LQ5H9L4 462 aa23.77■■□□□ 1.4
CPSF2-203ENST00000554290 SLC4A10Q6U841 1118 aa23.77■■□□□ 1.4
CPSF2-203ENST00000554290 C15orf52Q6ZUT6 534 aaKnown RBP23.77■■□□□ 1.4
CPSF2-203ENST00000554290 HELBQ8NG08 1087 aaPredicted RBP23.77■■□□□ 1.4
CPSF2-203ENST00000554290 SRCIN1Q9C0H9 1055 aa23.77■■□□□ 1.4
CPSF2-203ENST00000554290 TAF5LO75529 589 aa23.76■■□□□ 1.39
CPSF2-203ENST00000554290 SLC10A3P09131 477 aa23.76■■□□□ 1.39
CPSF2-203ENST00000554290 CD209Q9NNX6 404 aa23.76■■□□□ 1.39
CPSF2-203ENST00000554290 LDHAL6AQ6ZMR3 332 aa23.75■■□□□ 1.39
CPSF2-203ENST00000554290 NF2P35240 595 aa23.74■■□□□ 1.39
CPSF2-203ENST00000554290 EPHA10Q5JZY3 1008 aa23.74■■□□□ 1.39
CPSF2-203ENST00000554290 ZNF804AQ7Z570 1209 aa23.74■■□□□ 1.39
CPSF2-203ENST00000554290 KIAA0825Q8IV33 1275 aa23.74■■□□□ 1.39
CPSF2-203ENST00000554290 REM2Q8IYK8 340 aaPredicted RBP23.74■■□□□ 1.39
CPSF2-203ENST00000554290 SAGE1Q9NXZ1 904 aa23.74■■□□□ 1.39
CPSF2-203ENST00000554290 SNAP23O00161 211 aa23.73■■□□□ 1.39
CPSF2-203ENST00000554290 CNNM1Q9NRU3 951 aa23.73■■□□□ 1.39
CPSF2-203ENST00000554290 SCAF8Q9UPN6 1271 aaKnown RBP23.73■■□□□ 1.39
CPSF2-203ENST00000554290 ZNF521Q96K83 1311 aa23.73■■□□□ 1.39
CPSF2-203ENST00000554290 SASH1O94885 1247 aa23.72■■□□□ 1.39
CPSF2-203ENST00000554290 IRS2Q9Y4H2 1338 aa23.71■■□□□ 1.39
CPSF2-203ENST00000554290 PLIN1O60240 522 aa23.71■■□□□ 1.39
CPSF2-203ENST00000554290 TTLL12Q14166 644 aaPredicted RBP23.71■■□□□ 1.39
CPSF2-203ENST00000554290 PRAMEF18Q5VWM3 479 aa23.71■■□□□ 1.39
CPSF2-203ENST00000554290 APOBEC3FQ8IUX4 373 aaKnown RBP23.71■■□□□ 1.39
CPSF2-203ENST00000554290 ZNF594Q96JF6 807 aaPredicted RBP23.71■■□□□ 1.39
CPSF2-203ENST00000554290 CSRNP1Q96S65 589 aa23.71■■□□□ 1.39
CPSF2-203ENST00000554290 PAPPA2Q9BXP8 1791 aa23.7■■□□□ 1.39
CPSF2-203ENST00000554290 IL1R1P14778 569 aa23.7■■□□□ 1.38
CPSF2-203ENST00000554290 RASAL3Q86YV0 1011 aa23.7■■□□□ 1.38
CPSF2-203ENST00000554290 UBE2Q2LH0YL09 131 aa23.69■■□□□ 1.38
CPSF2-203ENST00000554290 TRPA1O75762 1119 aa23.69■■□□□ 1.38
CPSF2-203ENST00000554290 DLGAP5Q15398 846 aa23.69■■□□□ 1.38
CPSF2-203ENST00000554290 MOB2Q70IA6 237 aa23.69■■□□□ 1.38
CPSF2-203ENST00000554290 MCOLN1Q9GZU1 580 aa23.69■■□□□ 1.38
CPSF2-203ENST00000554290 RNF186Q9NXI6 227 aa23.69■■□□□ 1.38
CPSF2-203ENST00000554290 CCDC85CA6NKD9 419 aa23.68■■□□□ 1.38
CPSF2-203ENST00000554290 E9PSI1 815 aa23.68■■□□□ 1.38
CPSF2-203ENST00000554290 FKBP1AP62942 108 aaKnown RBP23.68■■□□□ 1.38
CPSF2-203ENST00000554290 ZBED3Q96IU2 234 aaPredicted RBP23.68■■□□□ 1.38
CPSF2-203ENST00000554290 ZNF646O15015 1829 aaPredicted RBP23.68■■□□□ 1.38
CPSF2-203ENST00000554290 DGKZQ13574 1117 aa23.67■■□□□ 1.38
CPSF2-203ENST00000554290 CERS5Q8N5B7 392 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms