RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 ANKIB1Q9P2G1 1089 aa9.3□□□□□ -0.92
TDP1-209ENST00000554180 KIF13BQ9NQT8 1826 aa9.3□□□□□ -0.92
TDP1-209ENST00000554180 PDS5AQ29RF7 1337 aaKnown RBP9.3□□□□□ -0.92
TDP1-209ENST00000554180 SEMA3EO15041 775 aa9.29□□□□□ -0.92
TDP1-209ENST00000554180 ATP2B4P23634 1241 aa9.29□□□□□ -0.92
TDP1-209ENST00000554180 PHKA1P46020 1223 aa9.29□□□□□ -0.92
TDP1-209ENST00000554180 LRRFIP1Q32MZ4 808 aaKnown RBP9.29□□□□□ -0.92
TDP1-209ENST00000554180 GRIPAP1Q4V328 841 aa9.29□□□□□ -0.92
TDP1-209ENST00000554180 ZNF622Q969S3 477 aaKnown RBP eCLIP9.29□□□□□ -0.92
TDP1-209ENST00000554180 RILPL2Q969X0 211 aa9.29□□□□□ -0.92
TDP1-209ENST00000554180 PAG1Q9NWQ8 432 aa9.29□□□□□ -0.92
TDP1-209ENST00000554180 GGA1Q9UJY5 639 aa9.29□□□□□ -0.92
TDP1-209ENST00000554180 IRS2Q9Y4H2 1338 aa9.29□□□□□ -0.92
TDP1-209ENST00000554180 LTBP1Q14766 1721 aa9.28□□□□□ -0.92
TDP1-209ENST00000554180 MED23Q9ULK4 1368 aa9.28□□□□□ -0.92
TDP1-209ENST00000554180 DLEC1Q9Y238 1755 aa9.28□□□□□ -0.92
TDP1-209ENST00000554180 PSDA5PKW4 1024 aaPredicted RBP9.28□□□□□ -0.92
TDP1-209ENST00000554180 UFL1O94874 794 aa9.28□□□□□ -0.92
TDP1-209ENST00000554180 CHMLP26374 656 aa9.28□□□□□ -0.92
TDP1-209ENST00000554180 CHRNA5P30532 468 aa9.28□□□□□ -0.92
TDP1-209ENST00000554180 PTGER2P43116 358 aa9.28□□□□□ -0.92
TDP1-209ENST00000554180 MCAMP43121 646 aa9.28□□□□□ -0.92
TDP1-209ENST00000554180 GPSM2P81274 684 aa9.28□□□□□ -0.92
TDP1-209ENST00000554180 TTF1Q15361 905 aaPredicted RBP9.28□□□□□ -0.92
TDP1-209ENST00000554180 PRPF40BQ6NWY9 871 aaKnown RBP9.28□□□□□ -0.92
TDP1-209ENST00000554180 FBXO33Q7Z6M2 555 aa9.28□□□□□ -0.92
TDP1-209ENST00000554180 KBTBD3Q8NAB2 608 aa9.28□□□□□ -0.92
TDP1-209ENST00000554180 FAM84BQ96KN1 310 aaPredicted RBP9.28□□□□□ -0.92
TDP1-209ENST00000554180 DNAJC2Q99543 621 aaKnown RBP9.28□□□□□ -0.92
TDP1-209ENST00000554180 UPF2Q9HAU5 1272 aaKnown RBP9.28□□□□□ -0.92
TDP1-209ENST00000554180 NSFL1CQ9UNZ2 370 aaKnown RBP9.28□□□□□ -0.92
TDP1-209ENST00000554180 ATF5Q9Y2D1 282 aaPredicted RBP9.28□□□□□ -0.92
TDP1-209ENST00000554180 CD2APQ9Y5K6 639 aa9.28□□□□□ -0.92
TDP1-209ENST00000554180 RAD50Q92878 1312 aa9.28□□□□□ -0.92
TDP1-209ENST00000554180 TAF1P21675 1872 aa9.28□□□□□ -0.92
TDP1-209ENST00000554180 SNAP23O00161 211 aa9.27□□□□□ -0.93
TDP1-209ENST00000554180 EPB41L2O43491 1005 aaKnown RBP9.27□□□□□ -0.93
TDP1-209ENST00000554180 IGSF3O75054 1194 aa9.27□□□□□ -0.93
TDP1-209ENST00000554180 HIBADHP31937 336 aaKnown RBP9.27□□□□□ -0.93
TDP1-209ENST00000554180 BCAMP50895 628 aa9.27□□□□□ -0.93
TDP1-209ENST00000554180 RASGRF1Q13972 1273 aa9.27□□□□□ -0.93
TDP1-209ENST00000554180 SOGA3Q5TF21 947 aa9.27□□□□□ -0.93
TDP1-209ENST00000554180 ZNF804AQ7Z570 1209 aa9.27□□□□□ -0.93
TDP1-209ENST00000554180 VPS37DQ86XT2 251 aa9.27□□□□□ -0.93
TDP1-209ENST00000554180 MPNDQ8N594 471 aa9.27□□□□□ -0.93
TDP1-209ENST00000554180 TTLL6Q8N841 843 aa9.27□□□□□ -0.93
TDP1-209ENST00000554180 SPATA5Q8NB90 893 aa9.27□□□□□ -0.93
TDP1-209ENST00000554180 TBC1D16Q8TBP0 767 aa9.27□□□□□ -0.93
TDP1-209ENST00000554180 C7orf43Q8WVR3 580 aa9.27□□□□□ -0.93
TDP1-209ENST00000554180 RUFY2Q8WXA3 655 aa9.27□□□□□ -0.93
TDP1-209ENST00000554180 FSD1Q9BTV5 496 aa9.27□□□□□ -0.93
TDP1-209ENST00000554180 SPON1Q9HCB6 807 aa9.27□□□□□ -0.93
TDP1-209ENST00000554180 TSHZ2Q9NRE2 1034 aa9.27□□□□□ -0.93
TDP1-209ENST00000554180 DIAPH3Q9NSV4 1193 aa9.27□□□□□ -0.93
TDP1-209ENST00000554180 DENND2AQ9ULE3 1009 aa9.27□□□□□ -0.93
TDP1-209ENST00000554180 DUOX1Q9NRD9 1551 aa9.26□□□□□ -0.93
TDP1-209ENST00000554180 SNED1Q8TER0 1413 aa9.26□□□□□ -0.93
TDP1-209ENST00000554180 GOLIM4O00461 696 aa9.26□□□□□ -0.93
TDP1-209ENST00000554180 REC8O95072 547 aa9.26□□□□□ -0.93
TDP1-209ENST00000554180 MAP4K4O95819 1239 aaPredicted RBP9.26□□□□□ -0.93
TDP1-209ENST00000554180 ZFYP08048 801 aaPredicted RBP9.26□□□□□ -0.93
TDP1-209ENST00000554180 DPEP1P16444 411 aa9.26□□□□□ -0.93
TDP1-209ENST00000554180 KCNA4P22459 653 aa9.26□□□□□ -0.93
TDP1-209ENST00000554180 GYG1P46976 350 aa9.26□□□□□ -0.93
TDP1-209ENST00000554180 FKBP4Q02790 459 aaKnown RBP eCLIP9.26□□□□□ -0.93
TDP1-209ENST00000554180 SCARF1Q14162 830 aa9.26□□□□□ -0.93
TDP1-209ENST00000554180 TMED8Q6PL24 325 aaPredicted RBP9.26□□□□□ -0.93
TDP1-209ENST00000554180 DPP8Q6V1X1 898 aaPredicted RBP9.26□□□□□ -0.93
TDP1-209ENST00000554180 EYA3Q99504 573 aa9.26□□□□□ -0.93
TDP1-209ENST00000554180 ESYT1Q9BSJ8 1104 aa9.26□□□□□ -0.93
TDP1-209ENST00000554180 RTFDC1Q9BY42 306 aaPredicted RBP9.26□□□□□ -0.93
TDP1-209ENST00000554180 HMG20BQ9P0W2 317 aa9.26□□□□□ -0.93
TDP1-209ENST00000554180 SGSM2O43147 1006 aa9.25□□□□□ -0.93
TDP1-209ENST00000554180 KCNA3P22001 575 aa9.25□□□□□ -0.93
TDP1-209ENST00000554180 KLRK1P26718 216 aa9.25□□□□□ -0.93
TDP1-209ENST00000554180 ZAP70P43403 619 aa9.25□□□□□ -0.93
TDP1-209ENST00000554180 ZSCAN25Q6NSZ9 544 aa9.25□□□□□ -0.93
TDP1-209ENST00000554180 SUPT20HQ8NEM7 779 aa9.25□□□□□ -0.93
TDP1-209ENST00000554180 EDC3Q96F86 508 aaKnown RBP9.25□□□□□ -0.93
TDP1-209ENST00000554180 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.25□□□□□ -0.93
TDP1-209ENST00000554180 SNRKQ9NRH2 765 aa9.25□□□□□ -0.93
TDP1-209ENST00000554180 PIM2Q9P1W9 311 aa9.25□□□□□ -0.93
TDP1-209ENST00000554180 POLLQ9UGP5 575 aa9.25□□□□□ -0.93
TDP1-209ENST00000554180 KIAA1551Q9HCM1 1747 aa9.25□□□□□ -0.93
TDP1-209ENST00000554180 COL1A1P02452 1464 aaPredicted RBP9.24□□□□□ -0.93
TDP1-209ENST00000554180 A0A0G2JLW4 131 aa9.24□□□□□ -0.93
TDP1-209ENST00000554180 WTIPA6NIX2 430 aaPredicted RBP9.24□□□□□ -0.93
TDP1-209ENST00000554180 C6orf229H3BNL8 230 aa9.24□□□□□ -0.93
TDP1-209ENST00000554180 CYP2E1P05181 493 aaPredicted RBP9.24□□□□□ -0.93
TDP1-209ENST00000554180 IL1R1P14778 569 aa9.24□□□□□ -0.93
TDP1-209ENST00000554180 MFAP1P55081 439 aaKnown RBP9.24□□□□□ -0.93
TDP1-209ENST00000554180 CCDC93Q567U6 631 aa9.24□□□□□ -0.93
TDP1-209ENST00000554180 PI16Q6UXB8 463 aa9.24□□□□□ -0.93
TDP1-209ENST00000554180 SLC51AQ86UW1 340 aa9.24□□□□□ -0.93
TDP1-209ENST00000554180 TXNRD3Q86VQ6 643 aa9.24□□□□□ -0.93
TDP1-209ENST00000554180 RTKN2Q8IZC4 609 aa9.24□□□□□ -0.93
TDP1-209ENST00000554180 ZGPATQ8N5A5 531 aaKnown RBP9.24□□□□□ -0.93
TDP1-209ENST00000554180 TDRD7Q8NHU6 1098 aaKnown RBP9.24□□□□□ -0.93
TDP1-209ENST00000554180 PSMD1Q99460 953 aa9.24□□□□□ -0.93
TDP1-209ENST00000554180 COA1Q9GZY4 146 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms