RNA–Protein interactions for RNA: ENST00000554118.1

LRP1-206, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 418 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-206ENST00000554118 ABCC12Q96J65 1359 aa9.69□□□□□ -0.86
LRP1-206ENST00000554118 C1orf115Q9H7X2 142 aa9.69□□□□□ -0.86
LRP1-206ENST00000554118 UNC80Q8N2C7 3258 aa9.69□□□□□ -0.86
LRP1-206ENST00000554118 KIAA0100Q14667 2235 aaKnown RBP9.68□□□□□ -0.86
LRP1-206ENST00000554118 CACNA1SQ13698 1873 aa9.68□□□□□ -0.86
LRP1-206ENST00000554118 RIC1Q4ADV7 1423 aa9.68□□□□□ -0.86
LRP1-206ENST00000554118 PDE8AO60658 829 aa9.68□□□□□ -0.86
LRP1-206ENST00000554118 HCLS1P14317 486 aaPredicted RBP9.68□□□□□ -0.86
LRP1-206ENST00000554118 HOXD11P31277 338 aaPredicted RBP9.68□□□□□ -0.86
LRP1-206ENST00000554118 IARSP41252 1262 aaKnown RBP9.68□□□□□ -0.86
LRP1-206ENST00000554118 DLK2Q6UY11 383 aa9.68□□□□□ -0.86
LRP1-206ENST00000554118 DEFB123Q8N688 67 aa9.68□□□□□ -0.86
LRP1-206ENST00000554118 JDP2Q8WYK2 163 aa9.68□□□□□ -0.86
LRP1-206ENST00000554118 SNX27Q96L92 541 aa9.68□□□□□ -0.86
LRP1-206ENST00000554118 STXBP5LQ9Y2K9 1186 aa9.68□□□□□ -0.86
LRP1-206ENST00000554118 CTSWP56202 376 aa9.67□□□□□ -0.86
LRP1-206ENST00000554118 SLC10A5Q5PT55 438 aa9.67□□□□□ -0.86
LRP1-206ENST00000554118 ERICH6BQ5W0A0 696 aa9.67□□□□□ -0.86
LRP1-206ENST00000554118 OLFM4Q6UX06 510 aa9.67□□□□□ -0.86
LRP1-206ENST00000554118 Q7L0L9 218 aa9.67□□□□□ -0.86
LRP1-206ENST00000554118 DPF3Q92784 378 aa9.67□□□□□ -0.86
LRP1-206ENST00000554118 BRIP1Q9BX63 1249 aa9.67□□□□□ -0.86
LRP1-206ENST00000554118 PLA2G12BQ9BX93 195 aa9.67□□□□□ -0.86
LRP1-206ENST00000554118 BICC1Q9H694 974 aaKnown RBP9.67□□□□□ -0.86
LRP1-206ENST00000554118 PDZRN3Q9UPQ7 1066 aa9.67□□□□□ -0.86
LRP1-206ENST00000554118 CHMP3Q9Y3E7 222 aa9.67□□□□□ -0.86
LRP1-206ENST00000554118 ANKRD31Q8N7Z5 1873 aa9.67□□□□□ -0.86
LRP1-206ENST00000554118 GPR25O00155 361 aa9.66□□□□□ -0.86
LRP1-206ENST00000554118 FOXO4P98177 505 aa9.66□□□□□ -0.86
LRP1-206ENST00000554118 RABL6Q3YEC7 729 aaPredicted RBP9.66□□□□□ -0.86
LRP1-206ENST00000554118 EPHA10Q5JZY3 1008 aa9.66□□□□□ -0.86
LRP1-206ENST00000554118 LMBR1LQ6UX01 489 aa9.66□□□□□ -0.86
LRP1-206ENST00000554118 USP48Q86UV5 1035 aa9.66□□□□□ -0.86
LRP1-206ENST00000554118 KAZALD1Q96I82 304 aa9.66□□□□□ -0.86
LRP1-206ENST00000554118 NLRP3Q96P20 1036 aa9.66□□□□□ -0.86
LRP1-206ENST00000554118 HMMRO75330 724 aa9.65□□□□□ -0.86
LRP1-206ENST00000554118 CCDC152Q4G0S7 254 aa9.65□□□□□ -0.86
LRP1-206ENST00000554118 STYK1Q6J9G0 422 aa9.65□□□□□ -0.86
LRP1-206ENST00000554118 CEP85Q6P2H3 762 aa9.65□□□□□ -0.86
LRP1-206ENST00000554118 CDC37L1Q7L3B6 337 aa9.65□□□□□ -0.86
LRP1-206ENST00000554118 RPAP2Q8IXW5 612 aaPredicted RBP9.65□□□□□ -0.86
LRP1-206ENST00000554118 ANKRD44Q8N8A2 993 aa9.65□□□□□ -0.86
LRP1-206ENST00000554118 C2orf69Q8N8R5 385 aa9.65□□□□□ -0.86
LRP1-206ENST00000554118 TTLL11Q8NHH1 800 aa9.65□□□□□ -0.86
LRP1-206ENST00000554118 TMEM106CQ9BVX2 250 aa9.65□□□□□ -0.86
LRP1-206ENST00000554118 ADARB2Q9NS39 739 aaKnown RBP9.65□□□□□ -0.86
LRP1-206ENST00000554118 TRIM17Q9Y577 477 aa9.65□□□□□ -0.86
LRP1-206ENST00000554118 COL11A2P13942 1736 aaPredicted RBP9.65□□□□□ -0.87
LRP1-206ENST00000554118 RTL9Q8NET4 1388 aa9.64□□□□□ -0.87
LRP1-206ENST00000554118 SRGAP3O43295 1099 aa9.64□□□□□ -0.87
LRP1-206ENST00000554118 FKTNO75072 461 aa9.64□□□□□ -0.87
LRP1-206ENST00000554118 CSF1RP07333 972 aa9.64□□□□□ -0.87
LRP1-206ENST00000554118 MTX1Q13505 466 aa9.64□□□□□ -0.87
LRP1-206ENST00000554118 SF3B3Q15393 1217 aaKnown RBP9.64□□□□□ -0.87
LRP1-206ENST00000554118 C3orf67Q6ZVT6 689 aa9.64□□□□□ -0.87
LRP1-206ENST00000554118 RPGRQ92834 1020 aaKnown RBP9.64□□□□□ -0.87
LRP1-206ENST00000554118 MASTLQ96GX5 879 aa9.64□□□□□ -0.87
LRP1-206ENST00000554118 CCDC85AQ96PX6 553 aaPredicted RBP9.64□□□□□ -0.87
LRP1-206ENST00000554118 GBA2Q9HCG7 927 aaPredicted RBP9.64□□□□□ -0.87
LRP1-206ENST00000554118 PCDHB15Q9Y5E8 787 aa9.64□□□□□ -0.87
LRP1-206ENST00000554118 BRCA2P51587 3418 aa9.63□□□□□ -0.87
LRP1-206ENST00000554118 PNMA6EA0A0J9YXQ4 647 aa9.63□□□□□ -0.87
LRP1-206ENST00000554118 SLC10A3P09131 477 aa9.63□□□□□ -0.87
LRP1-206ENST00000554118 ATP8B2P98198 1209 aa9.63□□□□□ -0.87
LRP1-206ENST00000554118 IFIT5Q13325 482 aaKnown RBP9.63□□□□□ -0.87
LRP1-206ENST00000554118 CCDC57Q2TAC2 916 aa9.63□□□□□ -0.87
LRP1-206ENST00000554118 TAF7LQ5H9L4 462 aa9.63□□□□□ -0.87
LRP1-206ENST00000554118 DDX46Q7L014 1031 aaKnown RBP9.63□□□□□ -0.87
LRP1-206ENST00000554118 GREM2Q9H772 168 aa9.63□□□□□ -0.87
LRP1-206ENST00000554118 VCANP13611 3396 aa9.63□□□□□ -0.87
LRP1-206ENST00000554118 SPEF2Q9C093 1822 aa9.62□□□□□ -0.87
LRP1-206ENST00000554118 TMEM265A0A087WTH1 108 aa9.62□□□□□ -0.87
LRP1-206ENST00000554118 ANKRD18BA2A2Z9 1011 aa9.62□□□□□ -0.87
LRP1-206ENST00000554118 KLRG2A4D1S0 409 aaPredicted RBP9.62□□□□□ -0.87
LRP1-206ENST00000554118 MYCP01106 439 aaPredicted RBP9.62□□□□□ -0.87
LRP1-206ENST00000554118 SRGNP10124 158 aa9.62□□□□□ -0.87
LRP1-206ENST00000554118 ITGA6P23229 1130 aa9.62□□□□□ -0.87
LRP1-206ENST00000554118 CRY2Q49AN0 593 aa9.62□□□□□ -0.87
LRP1-206ENST00000554118 SIRT2Q8IXJ6 389 aa9.62□□□□□ -0.87
LRP1-206ENST00000554118 RTKN2Q8IZC4 609 aa9.62□□□□□ -0.87
LRP1-206ENST00000554118 SSH3Q8TE77 659 aa9.62□□□□□ -0.87
LRP1-206ENST00000554118 C7orf43Q8WVR3 580 aa9.62□□□□□ -0.87
LRP1-206ENST00000554118 RBM17Q96I25 401 aaKnown RBP9.62□□□□□ -0.87
LRP1-206ENST00000554118 CCDC136Q96JN2 1154 aa9.62□□□□□ -0.87
LRP1-206ENST00000554118 CDC5LQ99459 802 aaKnown RBP9.62□□□□□ -0.87
LRP1-206ENST00000554118 RWDD1Q9H446 243 aaPredicted RBP9.62□□□□□ -0.87
LRP1-206ENST00000554118 PPP4R2Q9NY27 417 aa9.62□□□□□ -0.87
LRP1-206ENST00000554118 RANBP2P49792 3224 aaKnown RBP9.61□□□□□ -0.87
LRP1-206ENST00000554118 NPR1P16066 1061 aa9.61□□□□□ -0.87
LRP1-206ENST00000554118 HDAC1Q13547 482 aaPredicted RBP9.61□□□□□ -0.87
LRP1-206ENST00000554118 POLA2Q14181 598 aa9.61□□□□□ -0.87
LRP1-206ENST00000554118 SLC4A8Q2Y0W8 1093 aa9.61□□□□□ -0.87
LRP1-206ENST00000554118 REM2Q8IYK8 340 aaPredicted RBP9.61□□□□□ -0.87
LRP1-206ENST00000554118 GPRC5DQ9NZD1 345 aa9.61□□□□□ -0.87
LRP1-206ENST00000554118 GTF3C3Q9Y5Q9 886 aa9.61□□□□□ -0.87
LRP1-206ENST00000554118 HOXA10P31260 410 aaPredicted RBP9.6□□□□□ -0.87
LRP1-206ENST00000554118 IGHMBP2P38935 993 aaKnown RBP9.6□□□□□ -0.87
LRP1-206ENST00000554118 RFX5P48382 616 aaPredicted RBP9.6□□□□□ -0.87
LRP1-206ENST00000554118 OS9Q13438 667 aaPredicted RBP9.6□□□□□ -0.87
LRP1-206ENST00000554118 GRAPQ13588 217 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms