RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 PCCAP05165 728 aaPredicted RBP9.97□□□□□ -0.81
ABCD4-220ENST00000553998 NF2P35240 595 aa9.97□□□□□ -0.81
ABCD4-220ENST00000553998 MAP3K11Q16584 847 aa9.97□□□□□ -0.81
ABCD4-220ENST00000553998 CCDC152Q4G0S7 254 aa9.97□□□□□ -0.81
ABCD4-220ENST00000553998 STRIP1Q5VSL9 837 aa9.97□□□□□ -0.81
ABCD4-220ENST00000553998 PRAMEF18Q5VWM3 479 aa9.97□□□□□ -0.81
ABCD4-220ENST00000553998 SPRYD7Q5W111 196 aa9.97□□□□□ -0.81
ABCD4-220ENST00000553998 CCDC191Q8NCU4 936 aa9.97□□□□□ -0.81
ABCD4-220ENST00000553998 AKAP11Q9UKA4 1901 aa9.97□□□□□ -0.81
ABCD4-220ENST00000553998 DDX60Q8IY21 1712 aaKnown RBP9.96□□□□□ -0.81
ABCD4-220ENST00000553998 POLR2AP24928 1970 aaKnown RBP9.96□□□□□ -0.81
ABCD4-220ENST00000553998 SCN9AQ15858 1988 aa9.96□□□□□ -0.81
ABCD4-220ENST00000553998 POTEFA5A3E0 1075 aa9.96□□□□□ -0.82
ABCD4-220ENST00000553998 APAF1O14727 1248 aa9.96□□□□□ -0.82
ABCD4-220ENST00000553998 FXR1P51114 621 aaKnown RBP eCLIP9.96□□□□□ -0.82
ABCD4-220ENST00000553998 RTL5Q5HYW3 569 aaPredicted RBP9.96□□□□□ -0.82
ABCD4-220ENST00000553998 OTOP1Q7RTM1 612 aa9.96□□□□□ -0.82
ABCD4-220ENST00000553998 ARMC9Q7Z3E5 817 aa9.96□□□□□ -0.82
ABCD4-220ENST00000553998 OGFOD1Q8N543 542 aa9.96□□□□□ -0.82
ABCD4-220ENST00000553998 SCAF8Q9UPN6 1271 aaKnown RBP9.96□□□□□ -0.82
ABCD4-220ENST00000553998 TRIM35Q9UPQ4 493 aa9.96□□□□□ -0.82
ABCD4-220ENST00000553998 MYO3BQ8WXR4 1341 aa9.96□□□□□ -0.82
ABCD4-220ENST00000553998 MED23Q9ULK4 1368 aa9.96□□□□□ -0.82
ABCD4-220ENST00000553998 TAF1P21675 1872 aa9.96□□□□□ -0.82
ABCD4-220ENST00000553998 MANSC4A6NHS7 340 aaPredicted RBP9.95□□□□□ -0.82
ABCD4-220ENST00000553998 WTIPA6NIX2 430 aaPredicted RBP9.95□□□□□ -0.82
ABCD4-220ENST00000553998 ZBTB48P10074 688 aaPredicted RBP9.95□□□□□ -0.82
ABCD4-220ENST00000553998 TTLL12Q14166 644 aaPredicted RBP9.95□□□□□ -0.82
ABCD4-220ENST00000553998 CCDC27Q2M243 656 aa9.95□□□□□ -0.82
ABCD4-220ENST00000553998 IFNL1Q8IU54 200 aa9.95□□□□□ -0.82
ABCD4-220ENST00000553998 ANKRD18AQ8IVF6 992 aa9.95□□□□□ -0.82
ABCD4-220ENST00000553998 ARMC5Q96C12 935 aa9.95□□□□□ -0.82
ABCD4-220ENST00000553998 COA1Q9GZY4 146 aa9.95□□□□□ -0.82
ABCD4-220ENST00000553998 BSDC1Q9NW68 430 aaPredicted RBP9.95□□□□□ -0.82
ABCD4-220ENST00000553998 PTPN22Q9Y2R2 807 aa9.95□□□□□ -0.82
ABCD4-220ENST00000553998 TRIM17Q9Y577 477 aa9.95□□□□□ -0.82
ABCD4-220ENST00000553998 MKRN3Q13064 507 aaKnown RBP9.94□□□□□ -0.82
ABCD4-220ENST00000553998 DUSP27Q5VZP5 1158 aa9.94□□□□□ -0.82
ABCD4-220ENST00000553998 RIC3Q7Z5B4 369 aa9.94□□□□□ -0.82
ABCD4-220ENST00000553998 APOBEC3FQ8IUX4 373 aaKnown RBP9.94□□□□□ -0.82
ABCD4-220ENST00000553998 MXD3Q9BW11 206 aa9.94□□□□□ -0.82
ABCD4-220ENST00000553998 MINPP1Q9UNW1 487 aa9.94□□□□□ -0.82
ABCD4-220ENST00000553998 SZT2Q5T011 3432 aa9.94□□□□□ -0.82
ABCD4-220ENST00000553998 TESPA1A2RU30 521 aaPredicted RBP9.93□□□□□ -0.82
ABCD4-220ENST00000553998 IGF2BP3O00425 579 aaKnown RBP eCLIP9.93□□□□□ -0.82
ABCD4-220ENST00000553998 ZNF853P0CG23 659 aa9.93□□□□□ -0.82
ABCD4-220ENST00000553998 CCT4P50991 539 aaKnown RBP9.93□□□□□ -0.82
ABCD4-220ENST00000553998 CALD1Q05682 793 aaKnown RBP9.93□□□□□ -0.82
ABCD4-220ENST00000553998 GOLGA2Q08379 1002 aa9.93□□□□□ -0.82
ABCD4-220ENST00000553998 MTMR14Q8NCE2 650 aa9.93□□□□□ -0.82
ABCD4-220ENST00000553998 TTLL11Q8NHH1 800 aa9.93□□□□□ -0.82
ABCD4-220ENST00000553998 SLC10A4Q96EP9 437 aa9.93□□□□□ -0.82
ABCD4-220ENST00000553998 ERO1AQ96HE7 468 aa9.93□□□□□ -0.82
ABCD4-220ENST00000553998 CDC5LQ99459 802 aaKnown RBP9.93□□□□□ -0.82
ABCD4-220ENST00000553998 PHAXQ9H814 394 aaKnown RBP9.93□□□□□ -0.82
ABCD4-220ENST00000553998 CWC25Q9NXE8 425 aaPredicted RBP9.93□□□□□ -0.82
ABCD4-220ENST00000553998 LEMD3Q9Y2U8 911 aa9.93□□□□□ -0.82
ABCD4-220ENST00000553998 SASH1O94885 1247 aa9.92□□□□□ -0.82
ABCD4-220ENST00000553998 NEUROD2Q15784 382 aa9.92□□□□□ -0.82
ABCD4-220ENST00000553998 TXNRD3Q86VQ6 643 aa9.92□□□□□ -0.82
ABCD4-220ENST00000553998 WNK4Q96J92 1243 aa9.92□□□□□ -0.82
ABCD4-220ENST00000553998 MYD88Q99836 296 aa9.92□□□□□ -0.82
ABCD4-220ENST00000553998 METTL22Q9BUU2 404 aaPredicted RBP9.92□□□□□ -0.82
ABCD4-220ENST00000553998 DEFB129Q9H1M3 183 aa9.92□□□□□ -0.82
ABCD4-220ENST00000553998 ANGEL1Q9UNK9 670 aaKnown RBP9.92□□□□□ -0.82
ABCD4-220ENST00000553998 PPP2R3BQ9Y5P8 575 aa9.92□□□□□ -0.82
ABCD4-220ENST00000553998 COL1A1P02452 1464 aaPredicted RBP9.91□□□□□ -0.82
ABCD4-220ENST00000553998 EN2P19622 333 aaPredicted RBP9.91□□□□□ -0.82
ABCD4-220ENST00000553998 CTSWP56202 376 aa9.91□□□□□ -0.82
ABCD4-220ENST00000553998 TTLL5Q6EMB2 1281 aa9.91□□□□□ -0.82
ABCD4-220ENST00000553998 LAS1LQ9Y4W2 734 aaKnown RBP9.91□□□□□ -0.82
ABCD4-220ENST00000553998 PPP1R12BO60237 982 aaPredicted RBP9.9□□□□□ -0.82
ABCD4-220ENST00000553998 CAP1Q01518 475 aa9.9□□□□□ -0.82
ABCD4-220ENST00000553998 SP3Q02447 781 aa9.9□□□□□ -0.82
ABCD4-220ENST00000553998 PRKG1Q13976 671 aa9.9□□□□□ -0.82
ABCD4-220ENST00000553998 OTUD7BQ6GQQ9 843 aa9.9□□□□□ -0.82
ABCD4-220ENST00000553998 WWC1Q8IX03 1113 aa9.9□□□□□ -0.82
ABCD4-220ENST00000553998 JARID2Q92833 1246 aaPredicted RBP9.9□□□□□ -0.82
ABCD4-220ENST00000553998 ZNF333Q96JL9 665 aa9.9□□□□□ -0.82
ABCD4-220ENST00000553998 CCDC85AQ96PX6 553 aaPredicted RBP9.9□□□□□ -0.82
ABCD4-220ENST00000553998 PTPN18Q99952 460 aa9.9□□□□□ -0.82
ABCD4-220ENST00000553998 EFCC1Q9HA90 598 aa9.9□□□□□ -0.82
ABCD4-220ENST00000553998 MBIPQ9NS73 344 aa9.9□□□□□ -0.82
ABCD4-220ENST00000553998 RANBP2P49792 3224 aaKnown RBP9.9□□□□□ -0.83
ABCD4-220ENST00000553998 PSME4Q14997 1843 aa9.89□□□□□ -0.83
ABCD4-220ENST00000553998 ZNF804BA4D1E1 1349 aa9.89□□□□□ -0.83
ABCD4-220ENST00000553998 IL16Q14005 1332 aa9.89□□□□□ -0.83
ABCD4-220ENST00000553998 IGKV5-2P06315 115 aa9.89□□□□□ -0.83
ABCD4-220ENST00000553998 GJA5P36382 358 aa9.89□□□□□ -0.83
ABCD4-220ENST00000553998 CRHR2Q13324 411 aa9.89□□□□□ -0.83
ABCD4-220ENST00000553998 SUPT20HL1Q3ZLR7 823 aa9.89□□□□□ -0.83
ABCD4-220ENST00000553998 C15orf52Q6ZUT6 534 aaKnown RBP9.89□□□□□ -0.83
ABCD4-220ENST00000553998 KIAA0825Q8IV33 1275 aa9.89□□□□□ -0.83
ABCD4-220ENST00000553998 WDR63Q8IWG1 891 aa9.89□□□□□ -0.83
ABCD4-220ENST00000553998 CD99L2Q8TCZ2 262 aa9.89□□□□□ -0.83
ABCD4-220ENST00000553998 OTUD5Q96G74 571 aa9.89□□□□□ -0.83
ABCD4-220ENST00000553998 CLMNQ96JQ2 1002 aa9.89□□□□□ -0.83
ABCD4-220ENST00000553998 CHMP4AQ9BY43 222 aa9.89□□□□□ -0.83
ABCD4-220ENST00000553998 GREM2Q9H772 168 aa9.89□□□□□ -0.83
ABCD4-220ENST00000553998 FZD1Q9UP38 647 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms