RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 H3BQV1 296 aa14.23□□□□□ -0.13
SPTB-206ENST00000553938 IFFO2Q5TF58 517 aa14.23□□□□□ -0.13
SPTB-206ENST00000553938 ZNF330Q9Y3S2 320 aaPredicted RBP14.23□□□□□ -0.13
SPTB-206ENST00000553938 LAMA4Q16363 1823 aa14.22□□□□□ -0.13
SPTB-206ENST00000553938 BIN1O00499 593 aa14.22□□□□□ -0.13
SPTB-206ENST00000553938 ANKRD13DQ6ZTN6 518 aa14.22□□□□□ -0.13
SPTB-206ENST00000553938 ERC1Q8IUD2 1116 aa14.22□□□□□ -0.13
SPTB-206ENST00000553938 SYNE4Q8N205 404 aa14.22□□□□□ -0.13
SPTB-206ENST00000553938 LRRN4CLQ8ND94 238 aa14.22□□□□□ -0.13
SPTB-206ENST00000553938 CYP27B1O15528 508 aa14.22□□□□□ -0.13
SPTB-206ENST00000553938 CLIP2Q9UDT6 1046 aa14.22□□□□□ -0.13
SPTB-206ENST00000553938 ANKARQ7Z5J8 1434 aa14.21□□□□□ -0.13
SPTB-206ENST00000553938 PALLDQ8WX93 1383 aa14.21□□□□□ -0.13
SPTB-206ENST00000553938 RXRAP19793 462 aa14.21□□□□□ -0.13
SPTB-206ENST00000553938 NCBP1Q09161 790 aaKnown RBP14.21□□□□□ -0.13
SPTB-206ENST00000553938 PLA2G4DQ86XP0 818 aa14.21□□□□□ -0.13
SPTB-206ENST00000553938 NSUN7Q8NE18 718 aaKnown RBP14.21□□□□□ -0.13
SPTB-206ENST00000553938 MEGF6O75095 1541 aa14.21□□□□□ -0.13
SPTB-206ENST00000553938 PTPDC1A2A3K4 754 aa14.21□□□□□ -0.13
SPTB-206ENST00000553938 POLR3DP05423 398 aaPredicted RBP14.21□□□□□ -0.13
SPTB-206ENST00000553938 HMGN5P82970 282 aaKnown RBP14.21□□□□□ -0.13
SPTB-206ENST00000553938 STK11IPQ8N1F8 1099 aa14.21□□□□□ -0.13
SPTB-206ENST00000553938 ZBTB3Q9H5J0 574 aa14.21□□□□□ -0.13
SPTB-206ENST00000553938 UTYO14607 1347 aa14.21□□□□□ -0.14
SPTB-206ENST00000553938 A0A1B0GVL5 298 aa14.21□□□□□ -0.14
SPTB-206ENST00000553938 EPB41L2O43491 1005 aaKnown RBP14.21□□□□□ -0.14
SPTB-206ENST00000553938 PSMA5P28066 241 aa14.21□□□□□ -0.14
SPTB-206ENST00000553938 AIFM3Q96NN9 605 aa14.21□□□□□ -0.14
SPTB-206ENST00000553938 METTL22Q9BUU2 404 aaPredicted RBP14.21□□□□□ -0.14
SPTB-206ENST00000553938 ERBB3P21860 1342 aa14.2□□□□□ -0.14
SPTB-206ENST00000553938 SLFN14P0C7P3 912 aa14.2□□□□□ -0.14
SPTB-206ENST00000553938 TNNT3P45378 269 aaPredicted RBP14.2□□□□□ -0.14
SPTB-206ENST00000553938 GOLGA8FQ08AF8 430 aa14.2□□□□□ -0.14
SPTB-206ENST00000553938 GOLGA8DPQ0D2H9 430 aa14.2□□□□□ -0.14
SPTB-206ENST00000553938 SNW1Q13573 536 aaKnown RBP14.2□□□□□ -0.14
SPTB-206ENST00000553938 CCAR1Q8IX12 1150 aaKnown RBP14.2□□□□□ -0.14
SPTB-206ENST00000553938 FMNL2Q96PY5 1086 aa14.2□□□□□ -0.14
SPTB-206ENST00000553938 SLC52A2Q9HAB3 445 aa14.2□□□□□ -0.14
SPTB-206ENST00000553938 NBPF26B4DH59 902 aa14.2□□□□□ -0.14
SPTB-206ENST00000553938 M0R2C6 588 aa14.2□□□□□ -0.14
SPTB-206ENST00000553938 IQCB1Q15051 598 aa14.2□□□□□ -0.14
SPTB-206ENST00000553938 NBPF14Q5TI25 921 aa14.2□□□□□ -0.14
SPTB-206ENST00000553938 NBPF10Q6P3W6 841 aaKnown RBP14.2□□□□□ -0.14
SPTB-206ENST00000553938 NBPF15Q8N660 670 aa14.2□□□□□ -0.14
SPTB-206ENST00000553938 NPHP3Q7Z494 1330 aa14.2□□□□□ -0.14
SPTB-206ENST00000553938 CLSTN1O94985 981 aa14.2□□□□□ -0.14
SPTB-206ENST00000553938 A1BGP04217 495 aa14.2□□□□□ -0.14
SPTB-206ENST00000553938 ADORA1P30542 326 aa14.2□□□□□ -0.14
SPTB-206ENST00000553938 GTF2F1P35269 517 aaKnown RBP eCLIP14.2□□□□□ -0.143e-7■■■■■ 42.4
SPTB-206ENST00000553938 SCARF1Q14162 830 aa14.2□□□□□ -0.14
SPTB-206ENST00000553938 PRIMPOLQ96LW4 560 aa14.2□□□□□ -0.14
SPTB-206ENST00000553938 CCDC66A2RUB6 948 aa14.19□□□□□ -0.14
SPTB-206ENST00000553938 FOXP2O15409 715 aa14.19□□□□□ -0.14
SPTB-206ENST00000553938 TNNT1P13805 278 aa14.19□□□□□ -0.14
SPTB-206ENST00000553938 PLCD4Q9BRC7 762 aa14.19□□□□□ -0.14
SPTB-206ENST00000553938 INCENPQ9NQS7 918 aa14.19□□□□□ -0.14
SPTB-206ENST00000553938 ST7Q9NRC1 585 aa14.19□□□□□ -0.14
SPTB-206ENST00000553938 FER1L4A9Z1Z3 1794 aa14.19□□□□□ -0.14
SPTB-206ENST00000553938 FDPSP14324 419 aaKnown RBP14.18□□□□□ -0.14
SPTB-206ENST00000553938 RNF20Q5VTR2 975 aa14.18□□□□□ -0.14
SPTB-206ENST00000553938 USPL1Q5W0Q7 1092 aa14.18□□□□□ -0.14
SPTB-206ENST00000553938 ATG9AQ7Z3C6 839 aa14.18□□□□□ -0.14
SPTB-206ENST00000553938 ELP1O95163 1332 aa14.18□□□□□ -0.14
SPTB-206ENST00000553938 PHKG2P15735 406 aa14.18□□□□□ -0.14
SPTB-206ENST00000553938 ATP5JP18859 108 aa14.18□□□□□ -0.14
SPTB-206ENST00000553938 NEXNQ0ZGT2 675 aa14.18□□□□□ -0.14
SPTB-206ENST00000553938 AMOTQ4VCS5 1084 aa14.18□□□□□ -0.14
SPTB-206ENST00000553938 HSP90AA4PQ58FG1 418 aa14.18□□□□□ -0.14
SPTB-206ENST00000553938 KRT28Q7Z3Y7 464 aa14.18□□□□□ -0.14
SPTB-206ENST00000553938 DDX58O95786 925 aaKnown RBP14.18□□□□□ -0.14
SPTB-206ENST00000553938 DHX40Q8IX18 779 aaKnown RBP14.18□□□□□ -0.14
SPTB-206ENST00000553938 AOPEPQ8N6M6 819 aa14.18□□□□□ -0.14
SPTB-206ENST00000553938 CLIC4Q9Y696 253 aa14.18□□□□□ -0.14
SPTB-206ENST00000553938 CHD2O14647 1828 aaKnown RBP14.18□□□□□ -0.14
SPTB-206ENST00000553938 JCADQ9P266 1359 aa14.17□□□□□ -0.14
SPTB-206ENST00000553938 CSB-PGBD3P0DP91 1061 aa14.17□□□□□ -0.14
SPTB-206ENST00000553938 FKBP4Q02790 459 aaKnown RBP eCLIP14.17□□□□□ -0.14
SPTB-206ENST00000553938 KCNH5Q8NCM2 988 aa14.17□□□□□ -0.14
SPTB-206ENST00000553938 SCAND2PQ9GZW5 306 aaPredicted RBP14.17□□□□□ -0.14
SPTB-206ENST00000553938 SIPA1L3O60292 1781 aaPredicted RBP14.17□□□□□ -0.14
SPTB-206ENST00000553938 AFDNP55196 1824 aaKnown RBP14.17□□□□□ -0.14
SPTB-206ENST00000553938 MCMDC2Q4G0Z9 681 aa14.17□□□□□ -0.14
SPTB-206ENST00000553938 OSBP2Q969R2 916 aa14.17□□□□□ -0.14
SPTB-206ENST00000553938 SENP2Q9HC62 589 aa14.17□□□□□ -0.14
SPTB-206ENST00000553938 E7EWF7 191 aa14.17□□□□□ -0.14
SPTB-206ENST00000553938 ME1P48163 572 aa14.17□□□□□ -0.14
SPTB-206ENST00000553938 CASP7P55210 303 aa14.17□□□□□ -0.14
SPTB-206ENST00000553938 SLC20A2Q08357 652 aa14.17□□□□□ -0.14
SPTB-206ENST00000553938 RBM43Q6ZSC3 357 aaKnown RBP14.17□□□□□ -0.14
SPTB-206ENST00000553938 TDRD7Q8NHU6 1098 aaKnown RBP14.17□□□□□ -0.14
SPTB-206ENST00000553938 MAST3O60307 1309 aa14.16□□□□□ -0.14
SPTB-206ENST00000553938 HSPD1P10809 573 aaKnown RBP14.16□□□□□ -0.14
SPTB-206ENST00000553938 PSEN1P49768 467 aa14.16□□□□□ -0.14
SPTB-206ENST00000553938 FOXO4P98177 505 aa14.16□□□□□ -0.14
SPTB-206ENST00000553938 TPD52L1Q16890 204 aaPredicted RBP14.16□□□□□ -0.14
SPTB-206ENST00000553938 DPCR1Q3MIW9 517 aa14.16□□□□□ -0.14
SPTB-206ENST00000553938 COPRSQ9NQ92 184 aa14.16□□□□□ -0.14
SPTB-206ENST00000553938 KIF28PB7ZC32 967 aa14.16□□□□□ -0.14
SPTB-206ENST00000553938 PIAS4Q8N2W9 510 aaPredicted RBP14.16□□□□□ -0.14
SPTB-206ENST00000553938 RAPGEF4Q8WZA2 1011 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms