RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 CCDC102BQ68D86 513 aa15.3■□□□□ 0.04
VIPAS39-206ENST00000553888 MAST3O60307 1309 aa15.3■□□□□ 0.04
VIPAS39-206ENST00000553888 RUFY3Q7L099 469 aa15.3■□□□□ 0.04
VIPAS39-206ENST00000553888 OSBP2Q969R2 916 aa15.3■□□□□ 0.04
VIPAS39-206ENST00000553888 ARAP2Q8WZ64 1704 aa15.29■□□□□ 0.04
VIPAS39-206ENST00000553888 A0A1B0GUL6 1792 aa15.29■□□□□ 0.04
VIPAS39-206ENST00000553888 FGFR2P21802 821 aa15.29■□□□□ 0.04
VIPAS39-206ENST00000553888 PUM3Q15397 648 aaKnown RBP15.29■□□□□ 0.04
VIPAS39-206ENST00000553888 ZMYM1Q5SVZ6 1142 aa15.29■□□□□ 0.04
VIPAS39-206ENST00000553888 FOXD4L5Q5VV16 416 aaPredicted RBP15.29■□□□□ 0.04
VIPAS39-206ENST00000553888 FOXD4L4Q8WXT5 416 aaPredicted RBP15.29■□□□□ 0.04
VIPAS39-206ENST00000553888 KCNB2Q92953 911 aa15.29■□□□□ 0.04
VIPAS39-206ENST00000553888 CHAMP1Q96JM3 812 aa15.29■□□□□ 0.04
VIPAS39-206ENST00000553888 SETDB2Q96T68 719 aa15.29■□□□□ 0.04
VIPAS39-206ENST00000553888 COL24A1Q17RW2 1714 aa15.29■□□□□ 0.04
VIPAS39-206ENST00000553888 MROH5Q6ZUA9 1318 aa15.29■□□□□ 0.04
VIPAS39-206ENST00000553888 UBR3Q6ZT12 1888 aa15.29■□□□□ 0.04
VIPAS39-206ENST00000553888 LAMA4Q16363 1823 aa15.29■□□□□ 0.04
VIPAS39-206ENST00000553888 RNF113AO15541 343 aaKnown RBP15.29■□□□□ 0.04
VIPAS39-206ENST00000553888 MCM4P33991 863 aa15.29■□□□□ 0.04
VIPAS39-206ENST00000553888 PAXIP1Q6ZW49 1069 aaPredicted RBP15.29■□□□□ 0.04
VIPAS39-206ENST00000553888 NBPF5PQ86XG9 351 aaPredicted RBP15.29■□□□□ 0.04
VIPAS39-206ENST00000553888 RFX7Q2KHR2 1363 aa15.29■□□□□ 0.04
VIPAS39-206ENST00000553888 CYP2E1P05181 493 aaPredicted RBP15.28■□□□□ 0.04
VIPAS39-206ENST00000553888 IGHMBP2P38935 993 aaKnown RBP15.28■□□□□ 0.04
VIPAS39-206ENST00000553888 CHRNDQ07001 517 aa15.28■□□□□ 0.04
VIPAS39-206ENST00000553888 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.28■□□□□ 0.04
VIPAS39-206ENST00000553888 CELF1Q92879 486 aaKnown RBP15.28■□□□□ 0.04
VIPAS39-206ENST00000553888 RFC4P35249 363 aa15.28■□□□□ 0.04
VIPAS39-206ENST00000553888 PIH1D3Q9NQM4 214 aaKnown RBP15.28■□□□□ 0.04
VIPAS39-206ENST00000553888 CIZ1Q9ULV3 898 aaPredicted RBP15.28■□□□□ 0.04
VIPAS39-206ENST00000553888 TNRC6CQ9HCJ0 1690 aaKnown RBP15.28■□□□□ 0.04
VIPAS39-206ENST00000553888 ZKSCAN1P17029 563 aaPredicted RBP15.27■□□□□ 0.04
VIPAS39-206ENST00000553888 WASHC4Q2M389 1173 aa15.27■□□□□ 0.04
VIPAS39-206ENST00000553888 ZSWIM6Q9HCJ5 1215 aa15.27■□□□□ 0.04
VIPAS39-206ENST00000553888 IQSEC3Q9UPP2 1182 aaPredicted RBP15.27■□□□□ 0.04
VIPAS39-206ENST00000553888 BCAMP50895 628 aa15.27■□□□□ 0.03
VIPAS39-206ENST00000553888 TRAPPC3LQ5T215 181 aa15.27■□□□□ 0.03
VIPAS39-206ENST00000553888 LPIN2Q92539 896 aa15.27■□□□□ 0.03
VIPAS39-206ENST00000553888 PDRG1Q9NUG6 133 aa15.27■□□□□ 0.03
VIPAS39-206ENST00000553888 RPAP1Q9BWH6 1393 aaPredicted RBP15.27■□□□□ 0.03
VIPAS39-206ENST00000553888 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.27■□□□□ 0.03
VIPAS39-206ENST00000553888 CYP21A2P08686 494 aa15.27■□□□□ 0.03
VIPAS39-206ENST00000553888 PUS7LQ9H0K6 701 aaKnown RBP15.27■□□□□ 0.03
VIPAS39-206ENST00000553888 DEKP35659 375 aaKnown RBP15.26■□□□□ 0.03
VIPAS39-206ENST00000553888 CUL4AQ13619 759 aa15.26■□□□□ 0.03
VIPAS39-206ENST00000553888 ZDHHC9Q9Y397 364 aa15.26■□□□□ 0.03
VIPAS39-206ENST00000553888 CYP46A1Q9Y6A2 500 aa15.26■□□□□ 0.03
VIPAS39-206ENST00000553888 MCM2P49736 904 aa15.26■□□□□ 0.03
VIPAS39-206ENST00000553888 TTLL5Q6EMB2 1281 aa15.26■□□□□ 0.03
VIPAS39-206ENST00000553888 HELLSQ9NRZ9 838 aa15.26■□□□□ 0.03
VIPAS39-206ENST00000553888 GOLGB1Q14789 3259 aaKnown RBP15.26■□□□□ 0.03
VIPAS39-206ENST00000553888 RTL9Q8NET4 1388 aa15.25■□□□□ 0.03
VIPAS39-206ENST00000553888 HSPD1P10809 573 aaKnown RBP15.25■□□□□ 0.03
VIPAS39-206ENST00000553888 SLC5A1P13866 664 aa15.25■□□□□ 0.03
VIPAS39-206ENST00000553888 RASGRF1Q13972 1273 aa15.25■□□□□ 0.03
VIPAS39-206ENST00000553888 HMG20BQ9P0W2 317 aa15.25■□□□□ 0.03
VIPAS39-206ENST00000553888 FOXP2O15409 715 aa15.25■□□□□ 0.03
VIPAS39-206ENST00000553888 IDH1O75874 414 aaKnown RBP15.25■□□□□ 0.03
VIPAS39-206ENST00000553888 NFIXQ14938 502 aa15.25■□□□□ 0.03
VIPAS39-206ENST00000553888 SF3B3Q15393 1217 aaKnown RBP15.25■□□□□ 0.03
VIPAS39-206ENST00000553888 STOX1Q6ZVD7 989 aa15.25■□□□□ 0.03
VIPAS39-206ENST00000553888 ANKRD18AQ8IVF6 992 aa15.25■□□□□ 0.03
VIPAS39-206ENST00000553888 PROM2Q8N271 834 aa15.25■□□□□ 0.03
VIPAS39-206ENST00000553888 WWC3Q9ULE0 1092 aa15.24■□□□□ 0.03
VIPAS39-206ENST00000553888 NPHP1O15259 732 aa15.24■□□□□ 0.03
VIPAS39-206ENST00000553888 ARID4AP29374 1257 aaPredicted RBP15.24■□□□□ 0.03
VIPAS39-206ENST00000553888 CDC5LQ99459 802 aaKnown RBP15.24■□□□□ 0.03
VIPAS39-206ENST00000553888 RNF20Q5VTR2 975 aa15.23■□□□□ 0.03
VIPAS39-206ENST00000553888 NECAB1Q8N987 351 aa15.23■□□□□ 0.03
VIPAS39-206ENST00000553888 LRRC2Q9BYS8 371 aa15.23■□□□□ 0.03
VIPAS39-206ENST00000553888 TM6SF1Q9BZW5 370 aa15.23■□□□□ 0.03
VIPAS39-206ENST00000553888 KLRK1P26718 216 aa15.23■□□□□ 0.03
VIPAS39-206ENST00000553888 GYG1P46976 350 aa15.23■□□□□ 0.03
VIPAS39-206ENST00000553888 ST3GAL1Q11201 340 aa15.23■□□□□ 0.03
VIPAS39-206ENST00000553888 SLC10A5Q5PT55 438 aa15.23■□□□□ 0.03
VIPAS39-206ENST00000553888 SLC9C2Q5TAH2 1124 aa15.23■□□□□ 0.03
VIPAS39-206ENST00000553888 LIMCH1Q9UPQ0 1083 aa15.23■□□□□ 0.03
VIPAS39-206ENST00000553888 U3KPZ7 1027 aaPredicted RBP15.23■□□□□ 0.03
VIPAS39-206ENST00000553888 HSP90B1P14625 803 aaKnown RBP15.23■□□□□ 0.03
VIPAS39-206ENST00000553888 BRD2P25440 801 aaKnown RBP15.23■□□□□ 0.03
VIPAS39-206ENST00000553888 BLOC1S2Q6QNY1 142 aa15.23■□□□□ 0.03
VIPAS39-206ENST00000553888 CCDC83Q8IWF9 413 aa15.23■□□□□ 0.03
VIPAS39-206ENST00000553888 NYXQ9GZU5 481 aa15.23■□□□□ 0.03
VIPAS39-206ENST00000553888 TPCN1Q9ULQ1 816 aa15.23■□□□□ 0.03
VIPAS39-206ENST00000553888 MINPP1Q9UNW1 487 aa15.23■□□□□ 0.03
VIPAS39-206ENST00000553888 ME3Q16798 604 aa15.22■□□□□ 0.03
VIPAS39-206ENST00000553888 TPTE2Q6XPS3 522 aa15.22■□□□□ 0.03
VIPAS39-206ENST00000553888 SPATA5Q8NB90 893 aa15.22■□□□□ 0.03
VIPAS39-206ENST00000553888 NLRP3Q96P20 1036 aa15.22■□□□□ 0.03
VIPAS39-206ENST00000553888 CWC22Q9HCG8 908 aaKnown RBP15.22■□□□□ 0.03
VIPAS39-206ENST00000553888 RPS6KB1P23443 525 aa15.22■□□□□ 0.03
VIPAS39-206ENST00000553888 HAND2P61296 217 aa15.22■□□□□ 0.03
VIPAS39-206ENST00000553888 DOCK2Q92608 1830 aa15.21■□□□□ 0.03
VIPAS39-206ENST00000553888 TOB2Q14106 344 aaPredicted RBP15.21■□□□□ 0.03
VIPAS39-206ENST00000553888 ZNF512BQ96KM6 892 aaPredicted RBP15.21■□□□□ 0.03
VIPAS39-206ENST00000553888 ZNF532Q9HCE3 1301 aa15.21■□□□□ 0.03
VIPAS39-206ENST00000553888 ADD2P35612 726 aa15.21■□□□□ 0.03
VIPAS39-206ENST00000553888 TXNRD1Q16881 649 aa15.21■□□□□ 0.03
VIPAS39-206ENST00000553888 APPBP2Q92624 585 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms